RPSBLAST alignment of GI: 254780300 and protein with PDBid: 3d6n

>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal- binding, pyrimidine biosynthesis, zinc; HET: FLC; 2.30A {Aquifex aeolicus} Length = 291

 Score =  257 bits (658), Expect = 2e-69
 Identities = 110/298 (36%), Positives = 166/298 (55%), Gaps = 10/298 (3%)

Query: 8   NFVTVKDLSMQDVNYLLDRANEYFQKKSHFNPSTTRLQGLTQINLFLETSTRTQTSFEVA 67
           + ++  DL+ ++V  +L  A E+ + K             + +  F E STRT+ SFE A
Sbjct: 3   SLISSLDLTREEVEEILKYAKEFKEGKE-------ETIKASAVLFFSEPSTRTRLSFEKA 55

Query: 68  GKLLGVHVININTKNSAMKKGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKGPS 127
            + LG+    ++   S+  KGE+  DT+ T   L  + +V R P+       + K     
Sbjct: 56  ARELGIETYLVSGSESSTVKGESFFDTLKTFEGLGFDYVVFRVPFVFFPYKEIVKSLNLR 115

Query: 128 IINAGDGTHEHPSQALLDAFAIRHFKGKISNLHIAICGDILHSRVARSDIMLLNTMGARI 187
           ++NAGDGTH+HPSQ L+D F I+   G++ +L +   GDI HSRV RS   LLN  GA+I
Sbjct: 116 LVNAGDGTHQHPSQGLIDFFTIKEHFGEVKDLRVLYVGDIKHSRVFRSGAPLLNMFGAKI 175

Query: 188 RVIAPITLLPKDISNMGVEVFHDMQKGLKNVDVIMILRMQQERIPRSLIPSIREYKHVYS 247
            V  P TL+P+D+    V+VF D+ KG+   DV++ LR+Q+ER   + IPS   Y   + 
Sbjct: 176 GVCGPKTLIPRDVEVFKVDVFDDVDKGIDWADVVIWLRLQKERQKENYIPSESSYFKQFG 235

Query: 248 LDEKKLKYAKKDALVMHPGPINRNYEISSSVADGSQSIIQYQVEMGVAVRMAIIKELL 305
           L +++    +K  L MHPGP+NRN +I   +    +S+IQ QV+ G+ VR AI K L 
Sbjct: 236 LTKERF---EKVKLYMHPGPVNRNVDIDHELVYTEKSLIQEQVKNGIPVRKAIYKFLW 290