HHsearch alignment for GI: 254780301 and conserved domain: COG0044
>COG0044 PyrC Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism].
Probab=100.00 E-value=0 Score=325.27 Aligned_cols=421 Identities=36% Similarity=0.565 Sum_probs=275.7
Q ss_pred CEEEECCEEECCCCCEEEEEEEEEECCEEEEECCCCCCCCCCCCCEEEECCCCEEECCEEECCCCCCCCCCCCCCCHHHH
Q ss_conf 26996429999888850001089979999983178655666788779988798895172714114789998311437889
Q gi|254780301|r 3 SFVLNNTRIIDPSRDIDEVGAIIVENGIILAAGADALNAKFPTSALIHDCTGLVAVPGIIDARVTLTGSPDEYSKNITTL 82 (431)
Q Consensus 3 ~llI~n~~iid~~~~~~~~~~I~I~~gkI~~Ig~~~~~~~~~~~~~vID~~G~~v~PGlID~H~Hl~~~~~~~~~~~~~~ 82 (431)
T Consensus 2 ~~lIk~~~iv~~--~~~~~~di~i~~g~I~~Ig~~l~~~---~~~~iiD~~g~~v~PG~ID~HVH~repg~~~ke~~~tg 76 (430)
T COG0044 2 DLLIKNARVVDP--GEDEVADILIKDGKIAAIGKNLEPT---SGAEIIDAKGLLVLPGLVDLHVHFREPGFEHKETFETG 76 (430)
T ss_pred CEEEEEEEEECC--CCEEEECEEEECCEEEEECCCCCCC---CCCEEEECCCCEECCCEEEEEEECCCCCCCHHHHHHHH
T ss_conf 569962099789--9705707799888898841577777---88717977898777777566773389984135568769
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCC-CCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99987078732124545566433316677776776643101223210001344322-22222100000112222343332
Q gi|254780301|r 83 SKEAVAGGITSIILMPLGMSSFLDEYTFIKYALEEIRVKSLINVYPTACLTSNMEG-KEISEMRLLQEQGIVSFIQSPMS 161 (431)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 161 (431)
T Consensus 77 s~AAa~GG~Ttv~dmPnt~P~~~~~~~~~~~~~-~a~~~~~vd~~~~~~it~~~~~~~~~~~~~~--~~g~~~F~~~~~~ 153 (430)
T COG0044 77 SRAAAAGGVTTVVDMPNTKPPIDTAEALEDKLE-RAKGKSVVDYAFYGGLTKGNLGKLELTERGV--EAGFKGFMDDSTG 153 (430)
T ss_pred HHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHH-HHHCCCEEEEEEEEEEECCCCHHHHHHHHHH--CCCEEEEECCCCC
T ss_conf 999975892699977789999887999999998-6403754789998764126510477664211--1546999569876
Q ss_pred CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 22211012456765421012222333222222211246753100122221000012355556654320001112223331
Q gi|254780301|r 162 IHDTQVLLNSMKYAHMLNAIVALDTHDHFLGSRGVINEGIIANYLGLVGIPSISETVPLARDLLIAQHTGGHYHASVISI 241 (431)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (431)
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~H~Ed~~~~~~~~~~~g~~~~~~~~~~~p~~aE~~~iar~~~la~~~g~~vhi~HiSt 233 (430)
T COG0044 154 ALDDDVLEEALEYAAELGALILVHAEDDDLIAEGVMNEGLRAPELGLAGRPPIAEASAIARDLELARATGARVHICHIST 233 (430)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 56889999999999855986999717803555567515865321034689837789999999999998699689995485
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 12110011110012223222222222223222211100000011122222222222223344311113444545432222
Q gi|254780301|r 242 PQSIALIKHAKAHNTKATCGISINNLILNENDVEMYNSLRKVLPPLRSETERMSMVEALEKGDIDIIVSDHTPRHMDTKL 321 (431)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (431)
T Consensus 234 ~~sv~li~~ak~~g~~vt~EvtphHL~l~~~~~~~~~~~~k~nPPLR~~~dr~aL~~~l~~G~ID~iasDHaPht~eeK~ 313 (430)
T COG0044 234 KESVELIRAAKAEGIRVTAEVTPHHLLLDEEDIEDLGTLAKVNPPLRDEEDREALWEALKDGVIDVIASDHAPHTLEEKR 313 (430)
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCEECCHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHC
T ss_conf 99999999987649955886272136656768532474024789999878999999998779876897689999978831
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC-CCEECCCCCCCEEEECCCCCEEECHHHHHC
Q ss_conf 3433322222221013678886765169899999998815179980999-972466872678998698978853778520
Q gi|254780301|r 322 LPFAEASFGSIGLETMLSAALRLFHGQQISLKKLIRALSTRPAQIFNLP-GGTLQTGTAADIALIDLNYQWTVKADDMSS 400 (431)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gls~~eal~~aT~npA~~lgl~-~G~I~~Gk~ADlvi~D~~~~~~i~~~~~~s 400 (431)
T Consensus 314 ~~f~~ap~G~~glE~~lpl~l~lv~~g~lsl~~~v~~~S~nPA~ifgl~~~g~i~~G~~ADl~lvD~~~~~~i~~~~~~s 393 (430)
T COG0044 314 LPFEEAPSGIPGLETALPLLLTLVKKGRLSLERLVELLSTNPARIFGLPPKGAIEEGADADLVLVDPDEEWTIRAEELYS 393 (430)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCEEEECCCCCEEECHHHHHC
T ss_conf 53200999873588899999999865887999999997419799839998874467997767998489870775366321
Q ss_pred CCCCCCCCCEEEEEEEEEEEECCEEEEEECC
Q ss_conf 2488656772782288999999999986249
Q gi|254780301|r 401 IHKNTVFDKEFFTGKVVRTYISGKQVYTLES 431 (431)
Q Consensus 401 ~~~~tp~~g~~~~g~V~~tiv~G~iVy~~e~ 431 (431)
T Consensus 394 k~~~sPf~G~~~~g~v~~Ti~rG~~v~~~~~ 424 (430)
T COG0044 394 KAKNSPFEGFELKGRVVATILRGKVVYEDGE 424 (430)
T ss_pred CCCCCCCCCCEEEEEEEEEEECCEEEEECCC
T ss_conf 1479998897762247899999899995684