HHsearch alignment for GI: 254780301 and conserved domain: PRK04250
>PRK04250 dihydroorotase; Provisional.
Probab=100.00 E-value=1.4e-45 Score=311.59 Aligned_cols=392 Identities=25% Similarity=0.330 Sum_probs=209.7
Q ss_pred CCCEEEECCEEECCCCCEEEEEEEEEECCEEEEECCCCCCCCCCCCCEEEECCCCEEECCEEECCCCCCCCCCCCCCCHH
Q ss_conf 96269964299998888500010899799999831786556667887799887988951727141147899983114378
Q gi|254780301|r 1 MTSFVLNNTRIIDPSRDIDEVGAIIVENGIILAAGADALNAKFPTSALIHDCTGLVAVPGIIDARVTLTGSPDEYSKNIT 80 (431)
Q Consensus 1 M~~llI~n~~iid~~~~~~~~~~I~I~~gkI~~Ig~~~~~~~~~~~~~vID~~G~~v~PGlID~H~Hl~~~~~~~~~~~~ 80 (431)
T Consensus 1 m~~l-i~~G~vv~~~~-~-~~adI~I~dGkI~~I~~~~----~~~~~~~~~~~G~~vlPG~ID~hvH~~~pg~~~ke~~~ 73 (408)
T PRK04250 1 MMEL-VLVGKFLYKGE-I-IEGSIGIEDGKISKISLRE----LKGDEKIKVDKGKIILPGLIDVHVHLRDFEEKYKETIE 73 (408)
T ss_pred CCEE-EECCEEEECCC-E-EEEEEEEECCEEEEECCCC----CCCCCEEEECCCCEEECCEEECCCCCCCCCCCHHHHHH
T ss_conf 9278-98629990898-8-9966999899998936888----99985799589998957889645067888853034688
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 89999870787321245455664333166777767766431012232100013443222222210000011222234333
Q gi|254780301|r 81 TLSKEAVAGGITSIILMPLGMSSFLDEYTFIKYALEEIRVKSLINVYPTACLTSNMEGKEISEMRLLQEQGIVSFIQSPM 160 (431)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (431)
T Consensus 74 sgs~AAa~GGvTtv~~mPnt~p~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~-~~~~~~-~~~~~k---~~~~~~~ 147 (408)
T PRK04250 74 TGTKAALHGGITTVFDMPNTKPPIMDEKTLKLRE-GIFEKKSYADYALGFLLAGNC-GEAKPV-KADFYK---IFMGAST 147 (408)
T ss_pred HHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHH-HHHCCCCEEEEEEEEEEECCC-CHHHHH-HHHHHH---HEECCCC
T ss_conf 7899998389359976788999868799999999-984769757883079960773-036788-887763---2303466
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 22221101245676542101222233322222221124675310012222100001235555665432000111222333
Q gi|254780301|r 161 SIHDTQVLLNSMKYAHMLNAIVALDTHDHFLGSRGVINEGIIANYLGLVGIPSISETVPLARDLLIAQHTGGHYHASVIS 240 (431)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (431)
T Consensus 148 ~~~~---~~~~~~~~~~~~~~~~vHaEd~~l~~-------------~~~~rP~~aE~~ai~r~~~la~~tg~~lhi~HvS 211 (408)
T PRK04250 148 GGIY---SENFEEDYACAPDIVSVHAEDPEIIR-------------RYPERPPEAEVRAIKKALEAAKKLKKPLHICHVS 211 (408)
T ss_pred CCHH---HHHHHHHHHHCCCCEEECCCCHHHHH-------------CCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECC
T ss_conf 5065---78799999865997899579978884-------------4899999999999999999999849969999458
Q ss_pred CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 11211001111001222322222222222322221110000001112222222222222334431111344454543222
Q gi|254780301|r 241 IPQSIALIKHAKAHNTKATCGISINNLILNENDVEMYNSLRKVLPPLRSETERMSMVEALEKGDIDIIVSDHTPRHMDTK 320 (431)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (431)
T Consensus 212 s~~~l~~I~~a~~~--~vt~Et~ph~L~l~~~~~~~-~~~~k~~PPLRs~~dr~aL~~~l~--~Id~i~SDH~P~~~e~K 286 (408)
T PRK04250 212 TKDGLKEILKSNLP--WVSFEVTPHHLFLTRKDYER-NPLLKVYPPLRSEEDRRALWENFS--RIPIIASDHAPHTLEDK 286 (408)
T ss_pred CHHHHHHHHHHCCC--CEEEEEEHHHHHCCHHHHCC-CCCEEECCCCCCHHHHHHHHHHHC--CCCEEEECCCCCCHHHH
T ss_conf 89999999984179--83999812264478377575-687497899997888999998626--88889836888897883
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCEEEECCCCCEEECHHHHHC
Q ss_conf 23433322222221013678886765169899999998815179980999972466872678998698978853778520
Q gi|254780301|r 321 LLPFAEASFGSIGLETMLSAALRLFHGQQISLKKLIRALSTRPAQIFNLPGGTLQTGTAADIALIDLNYQWTVKADDMSS 400 (431)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gls~~eal~~aT~npA~~lgl~~G~I~~Gk~ADlvi~D~~~~~~i~~~~~~s 400 (431)
T Consensus 287 ~----~~~~G~~glEt~lpl~~~~v~~g~isl~~lv~~~s~nPAki~gl~~~~i~~G~dADlvi~Dp~~~~~v~~~~~~s 362 (408)
T PRK04250 287 E----AGAAGLPGLETEVALLLDAANKGMITLKDIVEKMHINPARIFGIKNKGFEEGKDADFTIVDMKKEWTIKAEEFYT 362 (408)
T ss_pred C----CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCEEEECCCCCEEECHHHCCC
T ss_conf 4----477898708889999999998179889999999742759964978888479986758999499978988577526
Q ss_pred CCCCCCCCCEEEEEEEEEEEECCEEEEEEC
Q ss_conf 248865677278228899999999998624
Q gi|254780301|r 401 IHKNTVFDKEFFTGKVVRTYISGKQVYTLE 430 (431)
Q Consensus 401 ~~~~tp~~g~~~~g~V~~tiv~G~iVy~~e 430 (431)
T Consensus 363 ~~~~spf~G~~l~G~v~~Ti~~G~~V~~~g 392 (408)
T PRK04250 363 KAGWTPYEGWKVKGKVIMTILRGEVVMEED 392 (408)
T ss_pred CCCCCCCCCCEEEEEEEEEEECCEEEEECC
T ss_conf 488578459788779999999999999999