HHsearch alignment for GI: 254780301 and conserved domain: PRK08417
>PRK08417 dihydroorotase; Provisional.
Probab=100.00 E-value=3.8e-43 Score=296.04 Aligned_cols=386 Identities=28% Similarity=0.434 Sum_probs=202.4
Q ss_pred EEEECCEEEEECCCCCCCCCCCCCEEEECCCCEEECCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 89979999983178655666788779988798895172714114789998311437889999870787321245455664
Q gi|254780301|r 24 IIVENGIILAAGADALNAKFPTSALIHDCTGLVAVPGIIDARVTLTGSPDEYSKNITTLSKEAVAGGITSIILMPLGMSS 103 (431)
Q Consensus 24 I~I~~gkI~~Ig~~~~~~~~~~~~~vID~~G~~v~PGlID~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (431)
T Consensus 1 I~I~~G~I~~Ig~~~------~~~~viDa~G~~vlPG~ID~HvH~~~~~~~~-~d~~tgs~AAa~GGvTtv~~mPnt~P~ 73 (387)
T PRK08417 1 IRIKEGKITEIGSNL------KGEEIVDAKGMTLLPALVDLNVRVKNDKLSL-KNLKLLANEALKGGIGSIVLRPDSTPS 73 (387)
T ss_pred CEEECCEEEEECCCC------CCCEEEECCCCEEECCEEECCCCCCCCCCCC-CHHHHHHHHHHHCCCEEEEECCCCCCC
T ss_conf 978799997705999------9985898999989799896874789999774-359999999984687899989889999
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 33316677776776643101223210001344322222221000001122223433322221101245676542101222
Q gi|254780301|r 104 FLDEYTFIKYALEEIRVKSLINVYPTACLTSNMEGKEISEMRLLQEQGIVSFIQSPMSIHDTQVLLNSMKYAHMLNAIVA 183 (431)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (431)
T Consensus 74 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~ 147 (387)
T PRK08417 74 IDNEISLELILS-NLAELPMQIFPSISAL---DKEGKLSNIAILLKKGAKAIY--LDSSLDANLLKRIAQYAQMLDVPIF 147 (387)
T ss_pred CCCHHHHHHHHH-HHCCCCCEEEEEEEEE---CCCCCHHHHHHHHHCCCEEEE--CCCCCCHHHHHHHHHHHHHCCCEEE
T ss_conf 999899999998-7305783289999971---588516779999877958996--5888986999999998886297799
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 23332222222112467531001222210000123555566543200011122233311211001111001222322222
Q gi|254780301|r 184 LDTHDHFLGSRGVINEGIIANYLGLVGIPSISETVPLARDLLIAQHTGGHYHASVISIPQSIALIKHAKAHNTKATCGIS 263 (431)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (431)
T Consensus 148 ~h~ed~~l~~~~~~~~g~~~~~~~l~~~P~~aE~~av~r~i~la~~~~~~~hi~HiSt~~~l~~i~~ak~~G~~it~Et~ 227 (387)
T PRK08417 148 CRCEDSSFRDSGVMNDGELSFELGLPGIPKLSETKEVAKMIELAKFYKIKVLFDALSLPRSLELIDKARSEGPNVFAEVS 227 (387)
T ss_pred EECCCHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEC
T ss_conf 90699899740687558633100799898799999999999999972996599972445667778998754872655541
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH-
Q ss_conf 2222223222211100000011122222222222223344311113444545432222343332222222101367888-
Q gi|254780301|r 264 INNLILNENDVEMYNSLRKVLPPLRSETERMSMVEALEKGDIDIIVSDHTPRHMDTKLLPFAEASFGSIGLETMLSAAL- 342 (431)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 342 (431)
T Consensus 228 phhL~l~~~~~~~~~~~~k~~PPLR~~~d~~aLw~~l~~G~Id~iaSDHaP~~~e~K~~~~~~~~~G~~Gve~~lpll~~ 307 (387)
T PRK08417 228 IHHLILDDSSCKGFNTAAKLNPPLRSKEDRLALREALKEGKIDFLTSLHSAKSNSKKDVAFDEAAFGIDSLEEYFSLCYT 307 (387)
T ss_pred HHHHHCCHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 87774799776366885076189989899999999974799888986888999787468720178985649999999999
Q ss_pred HHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCEEEECCCCCEEECHHHHHCCCCCCCCCCEEEEEEEEEEEEC
Q ss_conf 67651698999999988151799809999724668726789986989788537785202488656772782288999999
Q gi|254780301|r 343 RLFHGQQISLKKLIRALSTRPAQIFNLPGGTLQTGTAADIALIDLNYQWTVKADDMSSIHKNTVFDKEFFTGKVVRTYIS 422 (431)
Q Consensus 343 ~~~~~~gls~~eal~~aT~npA~~lgl~~G~I~~Gk~ADlvi~D~~~~~~i~~~~~~s~~~~tp~~g~~~~g~V~~tiv~ 422 (431)
T Consensus 308 ~~v~~g~isl~~~v~~~s~nPAki~gl~kG~i~~G~dADlvi~D~~~~~~v~~-------~~sp~eG~~~~G~v~~Ti~r 380 (387)
T PRK08417 308 KLIKSGFINMSELSRFTSKNPAEFLGLNSGVIEVGKEADLVLFDPNKKEIIDD-------KFSLYYGEELYGKIEAVIIK 380 (387)
T ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEECC-------CCCCCCCCEEEEEEEEEEEC
T ss_conf 99986998999999999788999959888750899957789992999879799-------87885698988899999999
Q ss_pred CEEEEEE
Q ss_conf 9999862
Q gi|254780301|r 423 GKQVYTL 429 (431)
Q Consensus 423 G~iVy~~ 429 (431)
T Consensus 381 G~~V~e~ 387 (387)
T PRK08417 381 GKLVLEK 387 (387)
T ss_pred CEEEEEC
T ss_conf 9999879