HHsearch alignment for GI: 254780301 and conserved domain: PRK13309
>PRK13309 ureC urease subunit alpha; Reviewed.
Probab=99.88 E-value=1.3e-21 Score=157.39 Aligned_cols=84 Identities=17% Similarity=0.251 Sum_probs=61.2
Q ss_pred CEEEECCEEECCCCCEEEEEEEEEECCEEEEECCCCC----C-----CCCCCCCEEEECCCCEEECCEEECCCCCCCCCC
Q ss_conf 2699642999988885000108997999998317865----5-----666788779988798895172714114789998
Q gi|254780301|r 3 SFVLNNTRIIDPSRDIDEVGAIIVENGIILAAGADAL----N-----AKFPTSALIHDCTGLVAVPGIIDARVTLTGSPD 73 (431)
Q Consensus 3 ~llI~n~~iid~~~~~~~~~~I~I~~gkI~~Ig~~~~----~-----~~~~~~~~vID~~G~~v~PGlID~H~Hl~~~~~ 73 (431)
T Consensus 69 D~VITNalIiD~~~GI-~KADIGIkdG~I~gIGKAGNPd~mdgV~p~~viG~~TeviaGEg~I~TAGgiDtHvHfi~Pqq 147 (572)
T PRK13309 69 DLVITNVTIVDARLGV-IKADVGIRDGKIAGIGKSGNPGVMDGVTQGMVVGVSTDAISGEHLILTAAGIDSHIHLISPQQ 147 (572)
T ss_pred CEEEECEEEEECCCCE-EECCCCCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCEECCCCEEEECCCCCCEEECCCHHH
T ss_conf 5899670998467776-974214437779763247897656799888077678525737741650365321000047788
Q ss_pred CCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf 31143788999987078732124
Q gi|254780301|r 74 EYSKNITTLSKEAVAGGITSIIL 96 (431)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~ 96 (431)
T Consensus 148 ---------~~~AL~sGiTT~iG 161 (572)
T PRK13309 148 ---------AYHALSNGVATFFG 161 (572)
T ss_pred ---------HHHHHHCCCEEEEC
T ss_conf ---------99998568768756