HHsearch alignment for GI: 254780301 and conserved domain: cd01294

>cd01294 DHOase Dihydroorotase (DHOase) catalyzes the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in the pyrimidine biosynthesis. In contrast to the large polyfunctional CAD proteins of higher organisms, this group of DHOases is monofunctional and mainly dimeric.

Probab=99.37  E-value=1.3e-11  Score=92.89  Aligned_cols=105  Identities=20%  Similarity=0.217  Sum_probs=66.3

Q ss_pred             CCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEC
Q ss_conf             22233443111-13444545432222343332222222101367888676516989999999881517998099997246
Q gi|254780301|r  297 VEALEKGDIDI-IVSDHTPRHMDTKLLPFAEASFGSIGLETMLSAALRLFHGQQISLKKLIRALSTRPAQIFNLPGGTLQ  375 (431)
Q Consensus       297 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gls~~eal~~aT~npA~~lgl~~G~I~  375 (431)
T Consensus       227 ~~al~~G~id~~iaTDHAPH~~~eKe~~~~~--AGi~~~~~al~~l~~~f~~~-~~l~~l~~f~s~n~a~~~gl~~----  299 (335)
T cd01294         227 RKAATSGHPKFFLGSDSAPHPKSNKESSCGC--AGIFSAPIALPYLAEVFEEH-NALDKLEAFASDNGPNFYGLPP----  299 (335)
T ss_pred             HHHHHCCCCCEEEECCCCCCCHHHCCCCCCC--CCCCCHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHCCCC----
T ss_conf             9999749984898479999864552488999--98157888999999999804-8499999998465798809998----


Q ss_pred             CCCCCCEEEECCCCCEEECHHHHHCCCCCCCCC-CEEE
Q ss_conf             687267899869897885377852024886567-7278
Q gi|254780301|r  376 TGTAADIALIDLNYQWTVKADDMSSIHKNTVFD-KEFF  412 (431)
Q Consensus       376 ~Gk~ADlvi~D~~~~~~i~~~~~~s~~~~tp~~-g~~~  412 (431)
T Consensus       300 --~~~~i~~~~--~~~~vp~~~~~~~~~~~P~~ag~~~  333 (335)
T cd01294         300 --NKKTITLVK--EPWKVPEKIPFGNNGVVPFRAGETL  333 (335)
T ss_pred             --CCCEEEEEE--CCCCCCCEEECCCCCEEECCCCCCC
T ss_conf             --998699997--8805687221499857863899877