HHsearch alignment for GI: 254780301 and conserved domain: cd01312
>cd01312 Met_dep_hydrolase_D Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.94 E-value=3e-27 Score=193.64 Aligned_cols=69 Identities=20% Similarity=0.250 Sum_probs=53.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCEEEECCCCCEEECHHHHHCCCCCCCCCCEEEEEEEEEEEECCE
Q ss_conf 169899999998815179980999972466872678998698978853778520248865677278228899999999
Q gi|254780301|r 347 GQQISLKKLIRALSTRPAQIFNLPGGTLQTGTAADIALIDLNYQWTVKADDMSSIHKNTVFDKEFFTGKVVRTYISGK 424 (431)
Q Consensus 347 ~~gls~~eal~~aT~npA~~lgl~~G~I~~Gk~ADlvi~D~~~~~~i~~~~~~s~~~~tp~~g~~~~g~V~~tiv~G~ 424 (431)
T Consensus 313 ~~~~~~~~~l~~aT~~gA~aLgl~iGsLe~Gk~ADliv~D~~~P~~~~~~~~~----~~~~-----~~~V~~v~V~G~ 381 (381)
T cd01312 313 DLLELASELLLMATLGGARALGLNNGEIEAGKRADFAVFELPGPGIKEQAPLQ----FILH-----AKEVRHLFISGK 381 (381)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHH----EEEC-----CCCCCEEEECCC
T ss_conf 99889999999999999999588785368778678999948999989843010----0003-----686897985899