HHsearch alignment for GI: 254780301 and conserved domain: cd01317
>cd01317 DHOase_IIa Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This subgroup also contains proteins that lack the active site, like unc-33, a C.elegans protein involved in axon growth.
Probab=100.00 E-value=4.8e-38 Score=263.23 Aligned_cols=373 Identities=38% Similarity=0.585 Sum_probs=164.8
Q ss_pred CCEEEECCCCEEECCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 87799887988951727141147899983114378899998707873212454556643331667777677664310122
Q gi|254780301|r 46 SALIHDCTGLVAVPGIIDARVTLTGSPDEYSKNITTLSKEAVAGGITSIILMPLGMSSFLDEYTFIKYALEEIRVKSLIN 125 (431)
Q Consensus 46 ~~~vID~~G~~v~PGlID~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (431)
T Consensus 1 ~~~vIDA~G~~v~PG~ID~H~H~~~pg~~~~e~~~t~t~aA~~GGvTtii~~p~~~p~~~~~~~~~~~~~-~~~~~~~~~ 79 (374)
T cd01317 1 DAEVIDAEGKILAPGLVDLHVHLREPGFEYKETLESGAKAAAAGGFTTVVCMPNTNPVIDNPAVVELLKN-RAKDVGIVR 79 (374)
T ss_pred CCEEEECCCCEEECCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHH-HCCCCCCCC
T ss_conf 9879988999991486854503599997651449999999983995899978899999897999999999-703458830
Q ss_pred CCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 32100013443222222210000011222234333222211012456765421012222333222222211246753100
Q gi|254780301|r 126 VYPTACLTSNMEGKEISEMRLLQEQGIVSFIQSPMSIHDTQVLLNSMKYAHMLNAIVALDTHDHFLGSRGVINEGIIANY 205 (431)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (431)
T Consensus 80 ~~~~~~~~~~~~~~~l~~~~~l~~~G~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~Ed~~~~~~~~~~~~~~~~~ 159 (374)
T cd01317 80 VLPIGALTKGLKGEELTEIGELLEAGAVGFSDDGKPIQDAELLRRALEYAAMLDLPIIVHPEDPSLAGGGVMNEGKVASR 159 (374)
T ss_pred EEEEEEEECCCCHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCHHH
T ss_conf 47899845486332556578898608546734996345799999999988754985999379867865466505863152
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 12222100001235555665432000111222333112110011110012223222222222223222211100000011
Q gi|254780301|r 206 LGLVGIPSISETVPLARDLLIAQHTGGHYHASVISIPQSIALIKHAKAHNTKATCGISINNLILNENDVEMYNSLRKVLP 285 (431)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (431)
T Consensus 160 ~~~~~~p~~~E~~ai~~~~~la~~~g~~vhi~Hiss~~~l~li~~ar~~G~~vt~e~~p~~L~~~~~~~~~~~~~~k~~P 239 (374)
T cd01317 160 LGLPGIPPEAETIMVARDLELAEATGARVHFQHLSTARSLELIRKAKAKGLPVTAEVTPHHLLLDDEALESYDTNAKVNP 239 (374)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEECHHHHCCCHHHHHCCCCCCCCCC
T ss_conf 08999999999999999999999729848973435588999999998748977999725653588878606676524689
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH-HHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 1222222222222233443111134445454322223433322222221013678-886765169899999998815179
Q gi|254780301|r 286 PLRSETERMSMVEALEKGDIDIIVSDHTPRHMDTKLLPFAEASFGSIGLETMLSA-ALRLFHGQQISLKKLIRALSTRPA 364 (431)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gls~~eal~~aT~npA 364 (431)
T Consensus 240 Plr~~~d~~~L~~~l~~g~id~i~sDH~p~~~~~k~~~~~~a~~G~~g~e~~lp~l~~~~v~~~~lsle~~v~~~s~nPA 319 (374)
T cd01317 240 PLRSEEDREALIEALKDGTIDAIASDHAPHTDEEKDLPFAEAPPGIIGLETALPLLWTLLVKGGLLTLPDLIRALSTNPA 319 (374)
T ss_pred CCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 87855679999999973993499968988887774577654776786500469999999998599999999999979999
Q ss_pred HHCCCCCCEECCCCCCCEEEECCCCCEEECHHHHHCCCCCCCCCCEEEEEEEEEE
Q ss_conf 9809999724668726789986989788537785202488656772782288999
Q gi|254780301|r 365 QIFNLPGGTLQTGTAADIALIDLNYQWTVKADDMSSIHKNTVFDKEFFTGKVVRT 419 (431)
Q Consensus 365 ~~lgl~~G~I~~Gk~ADlvi~D~~~~~~i~~~~~~s~~~~tp~~g~~~~g~V~~t 419 (431)
T Consensus 320 k~lgl~~G~i~~G~dADlvi~Dp~~~~~v~~~~~~s~~~~sp~eG~~~~G~v~~T 374 (374)
T cd01317 320 KILGLPPGRLEVGAPADLVLFDPDAEWIVDEETFRSKSKNTPFDGQKLKGRVLAT 374 (374)
T ss_pred HHHCCCCCCCCCCCCCCEEEEECCCCEEECHHHCCCCCCCCCCCCCEEEEEEEEC
T ss_conf 9969996864799847889995999889883557175886784598887899679