PSIBLAST alignment of GI: 254780301 and protein with PDB id: 1a5k
>gi|3212376|pdb|1A5K|C Chain C, K217e Variant Of Klebsiella Aerogenes Urease Length = 566
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 41/394 (10%), Positives = 90/394 (22%), Gaps = 32/394 (8%)
Query: 3 SFVLNNTRIIDPSRDIDEVGAIIVENGIILAAGADALNAKFP-------TSALIHDCTGL 55
VL N I+D + I V++G I A G P + + G
Sbjct: 66 DLVLTNALIVDHWGIV--KADIGVKDGRIFAIGKAGNPDIQPNVTIPIGAATEVIAAEGK 123
Query: 56 VAVPGIIDARVTLTGSPDEYSKNITTLSKEAVAGGITSIILMPLGMSSFLDEYTFIKYAL 115
+ G ID + + + + + V GG +
Sbjct: 124 IVTAGGIDTHIHWICP-QQAEEALVSGVTTMVGGGTGPAAGTHAT----TCTPGPWYISR 178
Query: 116 EEIRVKSLINVYPTACLTSNMEGKEISEMRLLQEQGIVSFIQSPMSIHDTQVLLNSMKYA 175
SL + + + E G+ + L
Sbjct: 179 MLQAADSLPVNIGLLGKGNVSQPDALREQVAAGVIGLEIHEDWGATPAAIDCALTVADEM 238
Query: 176 HMLNAIVALDTHDHFLGSRGVINEGIIANYLGLVGIPSISETVPLARDLLIAQHTGGHYH 235
+ A+ + ++ + G + + +
Sbjct: 239 DIQVALHSDTLNESGFVEDTLAAIGGRTIHTFHTEGAGGGHAPDIITACAHPNILPSSTN 298
Query: 236 ASVISIPQSIALIKHAKAHNTKATCGISINNLILNENDVEMYNSLRKVLPPLRSETERMS 295
++ +I + + + + + R
Sbjct: 299 PTLPYTLNTIDEHLD-------------MLMVCHHLDPDIAEDVAFAESRIRRETIAAED 345
Query: 296 MVEALEKGDIDIIVSDHTPRHMDTKLLPFAEASFGSIGLETMLSAALRLFHGQQISLKKL 355
++ L + S R + L + A +K+
Sbjct: 346 VLHDLGAFSLTSSDSQAMGRVGEVILR---TWQVAHRMKVQRGALAEETGDNDNFRVKRY 402
Query: 356 IRALSTRPAQIFNLPG--GTLQTGTAADIALIDL 387
I + PA + G+++ G AD+ +
Sbjct: 403 IAKYTINPALTHGIAHEVGSIEVGKLADLVVWSP 436