PSIBLAST alignment of GI: 254780301 and protein with PDB id: 3gip
gi|257097240|pdb|3GIP|A Chain A, Crystal Structure Of N-Acyl-D-Glutamate Deacylase From Bordetella Bronchiseptica Complexed With Zinc, Acetate And Formate Ions. Length = 480
>gi|257097241|pdb|3GIP|B Chain B, Crystal Structure Of N-Acyl-D-Glutamate Deacylase From Bordetella Bronchiseptica Complexed With Zinc, Acetate And Formate Ions. Length = 480
Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats.
Identities = 48/471 (10%), Positives = 111/471 (23%), Gaps = 67/471 (14%)
Query: 6 LNNTRIIDPSRDIDEVGAIIVENGIILAAGADALNAKFPTSALIHDCTGLVAVPGIIDAR 65
+ IID + + V +G I A G + D +G + PG ID
Sbjct: 11 ITGGWIIDGTGAPRRRADLGVRDGRIAAIGE----LGAHPARHAWDASGKIVAPGFIDVH 66
Query: 66 VTLTGSPDEYSKNIT---------------------------TLSKEAVAGGITSIILMP 98
++ T + A+ G +P
Sbjct: 67 GH-DDLMFVEKPDLRWKTSQGITTVVVGNCGVSAAPAPLPGNTAAALALLGETPLFADVP 125
Query: 99 LGMSSFLDEYTFIKYALEEIRVKSLINVYPTACLTSNMEGKEISEMRLLQEQGIVSFIQS 158
++ + I A + ++ + L + S
Sbjct: 126 AYFAALDAQRPMINVAALVGHANLRLAAMRDPQAAPTAAEQQAMQDMLQAALEAGAVGFS 185
Query: 159 PMSIHDTQVLLNSMKYAHMLNAIVALDTHDHFLGSRGVINEGIIANYLGLVGIPSISETV 218
+ + + + + + +G + TV
Sbjct: 186 TGLAYQPGAVAQAAELEGLARVAAERRRLHTSHIRNEADGVEAAVEEVLAIGRGTGCATV 245
Query: 219 PLARDLLIAQHTGGHYHASVISIPQSIALIKHA----KAHNTKATCGISINNLILNENDV 274
++ Q+ G ++ A + I +
Sbjct: 246 VSHHKCMMPQNWGRSRATLANIDRAREQGVEVALDIYPYPGSSTILIPERAETIDDIRIT 305
Query: 275 EMYNSLRKVLPPLRSETERMSMVEALEKGDIDIIVSDHTPRHMDTKLLPFAEASFG---- 330
L R + + + + D F
Sbjct: 306 WSTPHPECSGEYLADIAARWGCDKTTAARRLAPAGAIYFAMDEDEVKRIFQHPCCMVGSD 365
Query: 331 ----------SIGLETMLSAALRLFHGQQISLKKLIRALSTRPAQIFNL-PGGTLQTGTA 379
+ + + ++L++ + ++ PA++F G LQ G
Sbjct: 366 GLPNDARPHPRLWGSFTRVLGRYVREARLMTLEQAVARMTALPARVFGFAERGVLQPGAW 425
Query: 380 ADIALIDLNY---QWTVKADDMSSIHKNTVFDKEFFTGKVVRTYISGKQVY 427
AD+ + D + + T ++S+ + ++G +V+
Sbjct: 426 ADVVVFDPDTVADRATWDEPTLASVG-------------IAGVLVNGAEVF 463