HHsearch alignment for GI: 254780302 and conserved domain: TIGR00023

Probab=100.00  E-value=0  Score=396.82  Aligned_cols=193  Identities=36%  Similarity=0.555  Sum_probs=173.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHC---CC----HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999998713779999999955998114789887899999976---92----010245445033223455334541
Q gi|254780302|r   13 APIISLILSYAIGSIPFGLLLTRMFGFQDIRSIGSGNIGATNVLRTS---NK----KLAFATLSLDAIKATATIIIVSEL   85 (205)
Q Consensus        13 ~~il~~~~~Yl~Gsip~~~~i~k~~~~~Dir~~GsgN~GatN~~r~~---G~----~~gi~v~l~D~~Kg~l~v~l~~~~   85 (205)
T Consensus         4 l~~~~~l~~YL~GSI~~a~~~~ki~~g~DiR~~GS~n~GATNvlR~lqskG~snak~~a~~Vli~D~lKG~lAv~l~~~~   83 (243)
T TIGR00023         4 LIVFLLLIAYLIGSIPSAYLVGKILKGIDIREHGSGNPGATNVLRVLQSKGVSNAKKAALLVLIFDILKGMLAVALSFLL   83 (243)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             89999999998747999999999836898541678885468899976414751146889999999886408999999998


Q ss_pred             CCC-C--------------CHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf             386-3--------------0389999998730221020787624689899999841110003567888889999600136
Q gi|254780302|r   86 FDH-K--------------IGILAGFATFLGHIFPVWLKFKGGKGISTYIGVLIALELKMAILFSAIWMSSALVTGYSSI  150 (205)
Q Consensus        86 ~~~-~--------------~~~~~~~~avlGH~fpi~l~FkGGKGvAt~~G~ll~l~p~~~li~~~i~~~~~~itr~~sl  150 (205)
T Consensus        84 ~~~~~~~~L~a~~~~~~Y~Lt~~~~~aa~LGH~fp~F~~FkGGK~VAT~~G~l~~~~~~~~~~~l~~wl~v~~~tkyvSL  163 (243)
T TIGR00023        84 GLFDLLQGLVAAVYQKVYYLTYLSCIAAVLGHIFPIFFKFKGGKGVATSGGSLLLISLWLFLIMLAVWLLVTLLTKYVSL  163 (243)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             65558888899887557899999999999851000002246724899999999999999999999999999999999999


Q ss_pred             HHHH---HHHHHHHHHHHCCCCHH----------------HHHHHHHHH------HHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             9999---99999999998078549----------------999999999------9999997999999976988644779
Q gi|254780302|r  151 SSLF---STLIIAMIIWITYPEVN----------------IPIIFTFMT------ITVYWKHIENIKRLILGSEKKIFKK  205 (205)
Q Consensus       151 ~sl~---~~~~~~~~~~~~~~~~~----------------~~~~~~~~~------~li~~~Hr~NIkRL~~G~E~ki~~k  205 (205)
T Consensus       164 ~S~~GvGta~~~~~~~~~~~~~~~~~F~~~P~~~I~~~~~~~~~~~l~~wYWPLt~~v~~rHr~NI~Rll~g~E~Kv~~~  243 (243)
T TIGR00023       164 SSIVGVGTALVLAFYVLWLKLPYLYFFKSDPLKAILYQNGWYIPVTLLLWYWPLTILVIYRHRANIQRLLRGTEPKVTQK  243 (243)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCC
T ss_conf             99999999999999997505786413375367787764024899999985779999999999998999860364011149