RPS-BLAST 2.2.22 [Sep-27-2009] Database: mmdb70 33,805 sequences; 4,956,049 total letters Searching..................................................done Query= gi|254780302|ref|YP_003064715.1| putative glycerol-3-phosphate acyltransferase PlsY [Candidatus Liberibacter asiaticus str. psy62] (205 letters) >3bh1_A UPF0371 protein DIP2346; structural genomics, unknown function, protein structure initiative, PSI-2; 2.51A {Corynebacterium diphtheriae NCTC13129} (A:1-344) Length = 344 Score = 28.9 bits (65), Expect = 0.50 Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 17/52 (32%) Query: 71 DAIKATATIIIV--------------SELF-DHKIGILAGFATFLGHIFPVW 107 + + T +++V S+++ +HK G+ AG+A F FP+W Sbjct: 167 EYAETTRDLVVVTAPGPGSGKLATCLSQVYHEHKRGVAAGYAKF--ETFPIW 216 >1sdo_A Bstyi; restriction endonuclease, hydrolase; 1.85A {Geobacillus stearothermophilus} (A:) Length = 203 Score = 28.8 bits (64), Expect = 0.55 Identities = 8/48 (16%), Positives = 13/48 (27%), Gaps = 3/48 (6%) Query: 2 NNLQFAYHELIAPIISLILSYAIGSIPFGLLLTRMFGFQDIRSIGSGN 49 F ++L + Y I G+ + M S G Sbjct: 132 GKYSFVAYDLFVKHM---AFYVSDKIDVGVEILPMKELSKEMSSGISY 176 Database: mmdb70 Posted date: Jun 20, 2010 3:12 AM Number of letters in database: 4,956,049 Number of sequences in database: 33,805 Lambda K H 0.328 0.142 0.417 Gapped Lambda K H 0.267 0.0723 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 33805 Number of Hits to DB: 1,473,519 Number of extensions: 60217 Number of successful extensions: 225 Number of sequences better than 10.0: 1 Number of HSP's gapped: 225 Number of HSP's successfully gapped: 11 Length of query: 205 Length of database: 4,956,049 Length adjustment: 84 Effective length of query: 121 Effective length of database: 2,116,429 Effective search space: 256087909 Effective search space used: 256087909 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.8 bits) S2: 52 (23.8 bits)