RPS-BLAST 2.2.22 [Sep-27-2009]

Database: mmdb70 
           33,805 sequences; 4,956,049 total letters

Searching..................................................done

Query= gi|254780302|ref|YP_003064715.1| putative glycerol-3-phosphate
acyltransferase PlsY [Candidatus Liberibacter asiaticus str. psy62]
         (205 letters)



>3bh1_A UPF0371 protein DIP2346; structural genomics, unknown
           function, protein structure initiative, PSI-2; 2.51A
           {Corynebacterium diphtheriae NCTC13129} (A:1-344)
          Length = 344

 Score = 28.9 bits (65), Expect = 0.50
 Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 17/52 (32%)

Query: 71  DAIKATATIIIV--------------SELF-DHKIGILAGFATFLGHIFPVW 107
           +  + T  +++V              S+++ +HK G+ AG+A F    FP+W
Sbjct: 167 EYAETTRDLVVVTAPGPGSGKLATCLSQVYHEHKRGVAAGYAKF--ETFPIW 216


>1sdo_A Bstyi; restriction endonuclease, hydrolase; 1.85A
           {Geobacillus stearothermophilus} (A:)
          Length = 203

 Score = 28.8 bits (64), Expect = 0.55
 Identities = 8/48 (16%), Positives = 13/48 (27%), Gaps = 3/48 (6%)

Query: 2   NNLQFAYHELIAPIISLILSYAIGSIPFGLLLTRMFGFQDIRSIGSGN 49
               F  ++L    +     Y    I  G+ +  M       S G   
Sbjct: 132 GKYSFVAYDLFVKHM---AFYVSDKIDVGVEILPMKELSKEMSSGISY 176


  Database: mmdb70
    Posted date:  Jun 20, 2010  3:12 AM
  Number of letters in database: 4,956,049
  Number of sequences in database:  33,805
  
Lambda     K      H
   0.328    0.142    0.417 

Gapped
Lambda     K      H
   0.267   0.0723    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33805
Number of Hits to DB: 1,473,519
Number of extensions: 60217
Number of successful extensions: 225
Number of sequences better than 10.0: 1
Number of HSP's gapped: 225
Number of HSP's successfully gapped: 11
Length of query: 205
Length of database: 4,956,049
Length adjustment: 84
Effective length of query: 121
Effective length of database: 2,116,429
Effective search space: 256087909
Effective search space used: 256087909
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 52 (23.8 bits)