HHSEARCH alignment of GI: 254780303 and SCOP domain: d1xo1a1

Alignment

Probab=91.70  E-value=0.054  Score=30.09  Aligned_cols=28  Identities=18%  Similarity=0.391  Sum_probs=25.1

Q ss_pred             CCCCCHHHHHHHHHHCCCHHHHHHHHHH
Q ss_conf             5896899999999974999999997099
Q gi|254780303|r   27 SDNISPATCRDMINYFGSAEQALEMIPE   54 (77)
Q Consensus        27 t~~VGp~Tf~~Ll~~fGsA~aAL~aLP~   54 (77)
                      -++|||.|...||+.|||-+..+++++.
T Consensus        24 V~GiG~KtA~kli~~~gsle~i~~~~~~   51 (105)
T d1xo1a1          24 VEGIGAKRGYNIIREFGNVLDIIDQLPL   51 (105)
T ss_dssp             CTTCCHHHHHHHHHHHCSHHHHHHHCSC
T ss_pred             CCCCCHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf             5884789999999870265899986887

SCOP domain information

class: All alpha proteins
fold: SAM domain-like
superfamily: 5' to 3' exonuclease, C-terminal subdomain
family: 5' to 3' exonuclease, C-terminal subdomain
domain: T5 5'-exonuclease
species: Bacteriophage T5 [TaxId: 10726]