HHsearch alignment for GI: 254780305 and conserved domain: COG3355

>COG3355 Predicted transcriptional regulator [Transcription].
Probab=93.77  E-value=0.1  Score=29.53  Aligned_cols=53  Identities=25%  Similarity=0.241  Sum_probs=41.7

Q ss_pred             HHHHHHHHH-CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC-----CCCEEEE
Q ss_conf             999999985-8898899999998299999999999999994179864-----7986898
Q gi|254780305|r   35 ERVRIKQSL-NNVPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHH-----PEGKVSL   87 (95)
Q Consensus        35 ~~~~Il~~L-~~~p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~~~-----pGg~v~l   87 (95)
T Consensus        29 Dv~v~~~LL~~~~~~tvdelae~lnr~rStv~rsl~~L~~~GlV~Rek~~~~~Ggy~yi   87 (126)
T COG3355          29 DVEVYKALLEENGPLTVDELAEILNRSRSTVYRSLQNLLEAGLVEREKVNLKGGGYYYL   87 (126)
T ss_pred             HHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEE
T ss_conf             99999999864699579999999783199999999999985886666422678861488