HHsearch alignment for GI: 254780305 and conserved domain: COG3355
>COG3355 Predicted transcriptional regulator [Transcription].
Probab=93.77 E-value=0.1 Score=29.53 Aligned_cols=53 Identities=25% Similarity=0.241 Sum_probs=41.7
Q ss_pred HHHHHHHHH-CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC-----CCCEEEE
Q ss_conf 999999985-8898899999998299999999999999994179864-----7986898
Q gi|254780305|r 35 ERVRIKQSL-NNVPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHH-----PEGKVSL 87 (95)
Q Consensus 35 ~~~~Il~~L-~~~p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~~~-----pGg~v~l 87 (95)
T Consensus 29 Dv~v~~~LL~~~~~~tvdelae~lnr~rStv~rsl~~L~~~GlV~Rek~~~~~Ggy~yi 87 (126)
T COG3355 29 DVEVYKALLEENGPLTVDELAEILNRSRSTVYRSLQNLLEAGLVEREKVNLKGGGYYYL 87 (126)
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEE
T ss_conf 99999999864699579999999783199999999999985886666422678861488