HHsearch alignment for GI: 254780305 and conserved domain: PRK10434
>PRK10434 srlR DNA-bindng transcriptional repressor SrlR; Provisional.
Probab=95.86 E-value=0.0085 Score=35.39 Aligned_cols=53 Identities=15% Similarity=0.151 Sum_probs=48.2
Q ss_pred HHHHHHHHCC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 9999998588-9889999999829999999999999999417986479868981
Q gi|254780305|r 36 RVRIKQSLNN-VPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHHPEGKVSLT 88 (95)
Q Consensus 36 ~~~Il~~L~~-~p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~~~pGg~v~l~ 88 (95)
T Consensus 7 ~~~Il~~L~~~g~v~v~eLa~~l~VS~~TIRRDL~~Le~~G~l~R~hGGa~~~~ 60 (256)
T PRK10434 7 QAAILEYLQKQGKCSVEELAQYFDTTGTTIRKDLVILEHAGTVIRTYGGVVLNK 60 (256)
T ss_pred HHHHHHHHHHCCCEEHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECEEECCC
T ss_conf 999999999869799999999879699899984999987898899947386477