HHsearch alignment for GI: 254780305 and conserved domain: PRK12423
>PRK12423 LexA repressor; Provisional.
Probab=92.88 E-value=0.43 Score=26.20 Aligned_cols=59 Identities=17% Similarity=0.178 Sum_probs=48.9
Q ss_pred CCCHHHHHHHHHHC------CCCCCHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 99989999999858------898899999998299-999999999999994179864798689813
Q gi|254780305|r 31 YTQCERVRIKQSLN------NVPIHIDDIIHHTGI-EAPVVYLVLLELDLAGRLCHHPEGKVSLTM 89 (95)
Q Consensus 31 ~~~~~~~~Il~~L~------~~p~~iD~l~~~tgl-~~~~v~~~LleLEL~G~i~~~pGg~v~l~~ 89 (95)
T Consensus 3 ~LT~kQ~~iL~fI~~~~~~~G~~Pt~rEI~~~~g~~S~~~v~~hl~~L~~kG~i~r~~~~~R~i~l 68 (202)
T PRK12423 3 TLTPKRAAILAFIRERIAQAGQPPSLAEIAQAFGFASRSVARKHVQALAEAGLIEVVPNQARGIRL 68 (202)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCEECCCCCCEEEEE
T ss_conf 208999999999999999629898899999982999867899999999988799706999537993