HHsearch alignment for GI: 254780305 and conserved domain: pfam01022

>pfam01022 HTH_5 Bacterial regulatory protein, arsR family. Members of this family contains a DNA binding 'helix-turn-helix' motif. This family includes other proteins which are not included in the Prosite definition.

Probab=95.70  E-value=0.021  Score=33.28  Aligned_cols=46  Identities=20%  Similarity=0.197  Sum_probs=43.1

Q ss_pred             CHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             9899999998588988999999982999999999999999941798
Q gi|254780305|r   33 QCERVRIKQSLNNVPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLC   78 (95)
Q Consensus        33 ~~~~~~Il~~L~~~p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~   78 (95)
T Consensus         1 Dp~Rl~Il~~L~~~~~~v~el~~~l~~sq~~vS~HL~~L~~~GlV~   46 (47)
T pfam01022         1 DPTRLKILYLLSEGELCVCELAEILGLSQSTVSHHLKKLREAGLVE   46 (47)
T ss_pred             CHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
T ss_conf             9589999999980899699999998958869999999998980968