HHsearch alignment for GI: 254780305 and conserved domain: pfam09339
>pfam09339 HTH_IclR IclR helix-turn-helix domain.
Probab=96.11 E-value=0.0096 Score=35.09 Aligned_cols=44 Identities=20% Similarity=0.285 Sum_probs=40.2
Q ss_pred HHHHHHCC--CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99998588--988999999982999999999999999941798647
Q gi|254780305|r 38 RIKQSLNN--VPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHHP 81 (95)
Q Consensus 38 ~Il~~L~~--~p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~~~p 81 (95)
T Consensus 7 ~iL~~~~~~~~~~~l~eia~~~gl~kstv~RlL~tL~~~G~v~~dp 52 (52)
T pfam09339 7 AILEALAEAPGGLSLTEIARRTGLPKSTAHRLLQTLVELGYVEQDP 52 (52)
T ss_pred HHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
T ss_conf 9999986289998999999998919999999999999881911692