HHsearch alignment for GI: 254780305 and conserved domain: pfam09339

>pfam09339 HTH_IclR IclR helix-turn-helix domain.
Probab=96.11  E-value=0.0096  Score=35.09  Aligned_cols=44  Identities=20%  Similarity=0.285  Sum_probs=40.2

Q ss_pred             HHHHHHCC--CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             99998588--988999999982999999999999999941798647
Q gi|254780305|r   38 RIKQSLNN--VPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHHP   81 (95)
Q Consensus        38 ~Il~~L~~--~p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~~~p   81 (95)
T Consensus         7 ~iL~~~~~~~~~~~l~eia~~~gl~kstv~RlL~tL~~~G~v~~dp   52 (52)
T pfam09339         7 AILEALAEAPGGLSLTEIARRTGLPKSTAHRLLQTLVELGYVEQDP   52 (52)
T ss_pred             HHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
T ss_conf             9999986289998999999998919999999999999881911692