HHsearch alignment for GI: 254780305 and conserved domain: smart00418
>smart00418 HTH_ARSR helix_turn_helix, Arsenical Resistance Operon Repressor.
Probab=94.04 E-value=0.054 Score=31.04 Aligned_cols=48 Identities=23% Similarity=0.250 Sum_probs=43.4
Q ss_pred HHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 999985889889999999829999999999999999417986479868
Q gi|254780305|r 38 RIKQSLNNVPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHHPEGKV 85 (95)
Q Consensus 38 ~Il~~L~~~p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~~~pGg~v 85 (95)
T Consensus 1 ~Il~~L~~~~~~~~ela~~l~is~~tvs~HL~~L~~~Glv~~~~~G~~ 48 (66)
T smart00418 1 KILKLLAEGELCVCELAEILGLSQSTVSHHLKKLREAGLVESRREGKR 48 (66)
T ss_pred CHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCE
T ss_conf 958897739966999999988298888799999998892689998689