HHsearch alignment of GI: 254780305 and MMDB domain: 1z05_A_1-105_403-429

>1z05_A (A:1-105,A:403-429) Transcriptional regulator, ROK family; structural genomics, PSI, protein structure initiative; 2.00A {Vibrio cholerae o1 biovar eltor str}

Probab=94.93  E-value=0.019  Score=33.13  Aligned_cols=48  Identities=17%  Similarity=0.142  Sum_probs=42.5

Q ss_pred             CHHHHHHHHHHC-CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf             989999999858-898899999998299999999999999994179864
Q gi|254780305|r   33 QCERVRIKQSLN-NVPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHH   80 (95)
Q Consensus        33 ~~~~~~Il~~L~-~~p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~~~   80 (95)
                      +..+.+||+.|- ..+++..+|++.+|++.+.|+.+|=+|+=+|+|.+.
T Consensus        38 ~~n~~~IL~lL~~~g~~T~~eLA~~lgLS~~TVs~~L~~L~~~GlI~~~   86 (132)
T 1z05_A           38 QINAGRVYKLIDQKGPISRIDLSKESELAPASITKITRELIDAHLIHET   86 (132)
T ss_dssp             HHHHHHHHHHHHHHCSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEE
T ss_pred             HHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf             9999999999998599189999988796999999999999988968981