HHsearch alignment of GI: 254780305 and MMDB domain: 3k0l_A_1-131

>3k0l_A (A:1-131) Repressor protein; helix-turn-helix, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.35A {Acinetobacter SP}
Probab=90.28  E-value=0.19  Score=27.73  Aligned_cols=57  Identities=11%  Similarity=0.045  Sum_probs=49.6

Q ss_pred             CCCCCCCHHHHHHHHHHCC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             6887999899999998588-98899999998299999999999999994179864798
Q gi|254780305|r   27 HYPEYTQCERVRIKQSLNN-VPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHHPEG   83 (95)
Q Consensus        27 ~~p~~~~~~~~~Il~~L~~-~p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~~~pGg   83 (95)
                      ......+..+-.||..|.. .++.+-+|++.++++.+.++.++-.||=+|+|.+.++-
T Consensus        39 ~~~~glt~~q~~iL~~l~~~~~~t~~~La~~~~i~~~~vs~~v~~L~~~GlV~r~~~~   96 (131)
T 3k0l_A           39 LSALEISLPQFTALSVLAAKPNLSNAKLAERSFIKPQSANKILQDLLANGWIEKAPDP   96 (131)
T ss_dssp             HHTTTCCHHHHHHHHHHHHCTTCCHHHHHHHHTSCGGGHHHHHHHHHHTTSEEEEECC
T ss_pred             HHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECC
T ss_conf             8675989999999999996799799999998588946489999999987984674347