HHsearch results for GI: 254780305 and protein with PDBid: 1ku9_A

>1ku9_A Hypothetical protein MJ223; putative transcription factor, homodimeric winged-helix fold, structural genomics, PSI; 2.80A {Methanocaldococcus jannaschii} SCOP: a.4.5.36

Probab=96.22  E-value=0.0044  Score=35.76  Aligned_cols=50  Identities=20%  Similarity=0.170  Sum_probs=44.1

Q ss_pred             CCHHHHHHHHHH--CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             998999999985--88988999999982999999999999999941798647
Q gi|254780305|r   32 TQCERVRIKQSL--NNVPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHHP   81 (95)
Q Consensus        32 ~~~~~~~Il~~L--~~~p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~~~p   81 (95)
                      .+..+.+|+..|  +.+|+++++|++.+|++.+.++..+-.|+=+|.|.+.+
T Consensus        24 l~~~~~~il~~L~~~~~p~t~~eLa~~l~is~s~vs~~l~~L~~~GlV~r~~   75 (152)
T 1ku9_A           24 LNKSVGAVYAILYLSDKPLTISDIMEELKISKGNVSMSLKKLEELGFVRKVW   75 (152)
T ss_dssp             CCHHHHHHHHHHHHCSSCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEC
T ss_pred             CCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEE
T ss_conf             8999999999999769892999999998968857999999999889989853