HHsearch results for GI: 254780305 and protein with PDBid: 1r1t_A

>1r1t_A Transcriptional repressor SMTB; zinc, transcriptional regulation, winged HTH protein, DNA binding, transcription repressor; 1.70A {Synechococcus elongatus pcc 7942} SCOP: a.4.5.5 PDB: 1r23_A 1smt_A 1r22_A

Probab=95.54  E-value=0.015  Score=32.94  Aligned_cols=53  Identities=17%  Similarity=0.240  Sum_probs=47.4

Q ss_pred             CHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEE
Q ss_conf             98999999985889889999999829999999999999999417986479868
Q gi|254780305|r   33 QCERVRIKQSLNNVPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHHPEGKV   85 (95)
Q Consensus        33 ~~~~~~Il~~L~~~p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~~~pGg~v   85 (95)
                      ++.+.+|+..|...+..+-+|++.+|++.+.|+-.|-.|+-+|+|...--|+.
T Consensus        45 dp~Rl~Il~~L~~~~~~v~ela~~l~~s~stvS~HL~~L~~aGlV~~~r~Gr~   97 (122)
T 1r1t_A           45 DPNRLRLLSLLARSELCVGDLAQAIGVSESAVSHQLRSLRNLRLVSYRKQGRH   97 (122)
T ss_dssp             CHHHHHHHHHHTTCCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEETTE
T ss_pred             CHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEECCE
T ss_conf             99999999999829976999999989198889999999998893368987378