HHsearch results for GI: 254780305 and protein with PDBid: 1r1u_A

>1r1u_A CZRA, repressor protein; zinc, DNA binding, transcriptional regulation, winged HTH protein, transcription repressor; 2.00A {Staphylococcus aureus} SCOP: a.4.5.5 PDB: 1r1v_A 2kjb_A 2kjc_A

Probab=95.03  E-value=0.015  Score=32.83  Aligned_cols=55  Identities=18%  Similarity=0.190  Sum_probs=49.9

Q ss_pred             CCCHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEE
Q ss_conf             9998999999985889889999999829999999999999999417986479868
Q gi|254780305|r   31 YTQCERVRIKQSLNNVPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHHPEGKV   85 (95)
Q Consensus        31 ~~~~~~~~Il~~L~~~p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~~~pGg~v   85 (95)
                      -.++.+.+|+..|...+..+-+|+...|++.+.++-.|-.|+-+|+|....-|+.
T Consensus        23 L~~p~Rl~Il~~L~~~~~~v~el~~~l~~s~s~vS~HL~~L~~aglV~~~r~G~~   77 (106)
T 1r1u_A           23 LGDYNRIRIMELLSVSEASVGHISHQLNLSQSNVSHQLKLLKSVHLVKAKRQGQS   77 (106)
T ss_dssp             TCSHHHHHHHHHHHHCCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEETTE
T ss_pred             HCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCE
T ss_conf             6999999999999829967999999876586589999999998893489988788