HHsearch results for GI: 254780305 and protein with PDBid: 3bpv_A
>3bpv_A Transcriptional regulator; MARR, DNA binding, transcription factor, winged helix motif, DNA-binding; 1.40A {Methanobacterium thermoautotrophicum} PDB: 3bpx_A*
Probab=91.01 E-value=0.2 Score=26.78 Aligned_cols=57 Identities=11% Similarity=0.046 Sum_probs=48.7
Q ss_pred CCCCCCCHHHHHHHHHHCC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 6887999899999998588-98899999998299999999999999994179864798
Q gi|254780305|r 27 HYPEYTQCERVRIKQSLNN-VPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHHPEG 83 (95)
Q Consensus 27 ~~p~~~~~~~~~Il~~L~~-~p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~~~pGg 83 (95)
..+-..+..+-.++..|+. .++.+.+|+...+++.+.++.++-.||-+|+|.+.+..
T Consensus 22 l~~~~lt~~q~~vL~~i~~~~~~t~~eLa~~~~~~~~~vs~~v~~L~~~glv~r~~~~ 79 (138)
T 3bpv_A 22 LGHLNLTDAQVACLLRIHREPGIKQDELATFFHVDKGTIARTLRRLEESGFIEREQDP 79 (138)
T ss_dssp SGGGTCCHHHHHHHHHHHHSTTCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEET
T ss_pred HHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCC
T ss_conf 8657989999999999985899799999999897987999999999968987860289