HHsearch results for GI: 254780305 and protein with PDBid: 3eco_A

>3eco_A MEPR; mutlidrug efflux pump regulator winged helix-turn-helix motif, DNA-binding, transcription, transcription regulation; 2.40A {Staphylococcus aureus}

Probab=90.67  E-value=0.23  Score=26.49  Aligned_cols=57  Identities=14%  Similarity=0.011  Sum_probs=48.6

Q ss_pred             CCCCCCCHHHHHHHHHHC---CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             688799989999999858---898899999998299999999999999994179864798
Q gi|254780305|r   27 HYPEYTQCERVRIKQSLN---NVPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHHPEG   83 (95)
Q Consensus        27 ~~p~~~~~~~~~Il~~L~---~~p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~~~pGg   83 (95)
                      ..+...+..+-.|+..|.   ..++..-+|++..+++.+.|+.++-.||=+|+|.+.+..
T Consensus        24 l~~~glt~~q~~vL~~l~~~~~~~~t~~ela~~l~~~~~tvs~~v~~L~~~glv~r~~~~   83 (139)
T 3eco_A           24 LEQFDITNEQGHTLGYLYAHQQDGLTQNDIAKALQRTGPTVSNLLRNLERKKLIYRYVDA   83 (139)
T ss_dssp             HGGGTCCHHHHHHHHHHHHSTTTCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECC
T ss_pred             HHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCC
T ss_conf             877698999999999998359999699999999896887899999999978897851678