HHsearch results for GI: 254780305 and protein with PDBid: 3nqo_A
>3nqo_A MARR-family transcriptional regulator; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE PG4; 2.20A {Clostridium difficile}
Probab=90.74 E-value=0.24 Score=26.33 Aligned_cols=52 Identities=12% Similarity=0.137 Sum_probs=45.2
Q ss_pred CCCHHHHHHHHHHC---CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99989999999858---89889999999829999999999999999417986479
Q gi|254780305|r 31 YTQCERVRIKQSLN---NVPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHHPE 82 (95)
Q Consensus 31 ~~~~~~~~Il~~L~---~~p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~~~pG 82 (95)
..+..+-.|+..|. ..++.+-+|++..|++.+.|+.++-.||=+|+|.+.+.
T Consensus 38 ~Lt~~q~~vL~~l~~~~~~~~t~~eLa~~l~i~~stvs~~v~~Le~~glI~r~~~ 92 (189)
T 3nqo_A 38 ILTSRQYMTILSILHLPEEETTLNNIARKMGTSKQNINRLVANLEKNGYVDVIPS 92 (189)
T ss_dssp SSCHHHHHHHHHHHHSCGGGCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEEC
T ss_pred CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 9999999999999847899909999999989688699999999998798637432