HHSEARCH alignment of GI: 254780305 and SCOP domain: d1j75a_

Alignment

Probab=91.41  E-value=0.07  Score=27.98  Aligned_cols=52  Identities=19%  Similarity=0.315  Sum_probs=44.7

Q ss_pred             HHHHHHHHCC--CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             9999998588--988999999982999999999999999941798647986898
Q gi|254780305|r   36 RVRIKQSLNN--VPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHHPEGKVSL   87 (95)
Q Consensus        36 ~~~Il~~L~~--~p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~~~pGg~v~l   87 (95)
                      |++||+.|++  .|+.+.+|+..|+.|-..+...|..|--.++|....-+..+|
T Consensus         3 EQkILQVL~dagspvk~~ql~k~cqVpkk~lNqVL~rlkke~kVsl~~patW~l   56 (57)
T d1j75a_           3 EQKILQVLSDDGGPVKIGQLVKKCQVPKKTLNQVLYRLKKEDRVSSPEPATWSI   56 (57)
T ss_dssp             HHHHHHHHHHHCSCEEHHHHHHHHCSCHHHHHHHHHHHHHTTSEEEEETTEEEE
T ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf             899999999459834799999997887889999999997555514688750137

SCOP domain information

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: Z-DNA binding domain
domain: Dlm-1
species: Mouse (Mus musculus) [TaxId: 10090]