HHSEARCH alignment of GI: 254780305 and SCOP domain: d1r1ua_

Alignment
>d1r1ua_ a.4.5.5 (A:) Metal-sensing transcriptional repressor CzrA {Staphylococcus aureus [TaxId: 1280]}
Probab=94.68  E-value=0.012  Score=32.08  Aligned_cols=57  Identities=21%  Similarity=0.219  Sum_probs=49.9

Q ss_pred             CCHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCE---EEEE
Q ss_conf             99899999998588988999999982999999999999999941798647986---8981
Q gi|254780305|r   32 TQCERVRIKQSLNNVPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHHPEGK---VSLT   88 (95)
Q Consensus        32 ~~~~~~~Il~~L~~~p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~~~pGg~---v~l~   88 (95)
                      .++.+-+|+..|...+..+-+|+...|++.+.++-.|-.|+-+|.|...--|+   |++.
T Consensus        16 ~d~~Rl~Il~~L~~~~~~v~el~~~l~~s~~~vS~HL~~L~~~glv~~~r~G~~~~Y~l~   75 (94)
T d1r1ua_          16 GDYNRIRIMELLSVSEASVGHISHQLNLSQSNVSHQLKLLKSVHLVKAKRQGQSMIYSLD   75 (94)
T ss_dssp             CSHHHHHHHHHHHHCCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEES
T ss_pred             CCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCEEEEEEC
T ss_conf             899999999999729956999999988787789999999998895379988789999989


SCOP domain information

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: ArsR-like transcriptional regulators
domain: Metal-sensing transcriptional repressor CzrA
species: Staphylococcus aureus [TaxId: 1280]