HHSEARCH alignment of GI: 254780305 and SCOP domain: d1sfxa_

Alignment

Probab=96.13  E-value=0.0038  Score=34.81  Aligned_cols=56  Identities=18%  Similarity=-0.004  Sum_probs=47.5

Q ss_pred             CCCHHHHHHHHHHCC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC---CCEEE
Q ss_conf             999899999998588-988999999982999999999999999941798647---98689
Q gi|254780305|r   31 YTQCERVRIKQSLNN-VPIHIDDIIHHTGIEAPVVYLVLLELDLAGRLCHHP---EGKVS   86 (95)
Q Consensus        31 ~~~~~~~~Il~~L~~-~p~~iD~l~~~tgl~~~~v~~~LleLEL~G~i~~~p---Gg~v~   86 (95)
                      ..+..+.+||.+|-. .+.++.+|++.+|++.+.|+.+|-.||=+|+|.+..   |++..
T Consensus        17 Glt~~e~~v~~~L~~~g~~t~~eia~~~~i~~~~v~~~l~~L~~~GlV~r~~~~~~~r~~   76 (109)
T d1sfxa_          17 SFKPSDVRIYSLLLERGGMRVSEIARELDLSARFVRDRLKVLLKRGFVRREIVEKGWVGY   76 (109)
T ss_dssp             CCCHHHHHHHHHHHHHCCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEEESSSEEE
T ss_pred             CCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCC
T ss_conf             999999999999882389989999998579835599999999959987988505788502

SCOP domain information

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: TrmB-like
domain: Hypothetical protein AF2008
species: Archaeoglobus fulgidus [TaxId: 2234]