HHsearch alignment for GI: 254780306 and conserved domain: PRK08938

>PRK08938 DNA topoisomerase I; Validated.
Probab=99.12  E-value=9.3e-11  Score=99.80  Aligned_cols=67  Identities=25%  Similarity=0.443  Sum_probs=52.4

Q ss_pred             CEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECC
Q ss_conf             1143346777313687157761112343432333210012210000123442014689999669998269742277348
Q gi|254780306|r  602 SRTCPECHTHSLSLKLSSKYGAFVGCTNYPECKYTRQLTSNPQDIPEMKESVLLGNDLETKESVTLRSGRFGLYVQRGD  680 (837)
Q Consensus       602 ~~~Cp~C~~g~L~~k~~gK~G~FigCSnyPeCk~t~~l~~~~~~~~~~~~~~~LG~dP~~G~~I~lk~GryGpYvq~Ge  680 (837)
T Consensus       617 ~~~CP~C~~g~l~~r~sk~g~~f~gCs~yp~C~~~~~~------------~p~~~~Cp~Cg~~~~~~~~~~g~~~~C~n  683 (692)
T PRK08938        617 GVTCPKCHKGQVIERKSKKNRIFYGCDRYPECDFVSWD------------KPIGRDCPKCGHYLVEKKVKKGKQVQCSN  683 (692)
T ss_pred             CCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCEECCC------------CCCCCCCCCCCCCCEEEECCCCCEEECCC
T ss_conf             88295999974575514789877748989989831678------------87488499999604268557888797899