HHsearch alignment for GI: 254780306 and conserved domain: PRK08938
>PRK08938 DNA topoisomerase I; Validated.
Probab=99.12 E-value=9.3e-11 Score=99.80 Aligned_cols=67 Identities=25% Similarity=0.443 Sum_probs=52.4
Q ss_pred CEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECC
Q ss_conf 1143346777313687157761112343432333210012210000123442014689999669998269742277348
Q gi|254780306|r 602 SRTCPECHTHSLSLKLSSKYGAFVGCTNYPECKYTRQLTSNPQDIPEMKESVLLGNDLETKESVTLRSGRFGLYVQRGD 680 (837)
Q Consensus 602 ~~~Cp~C~~g~L~~k~~gK~G~FigCSnyPeCk~t~~l~~~~~~~~~~~~~~~LG~dP~~G~~I~lk~GryGpYvq~Ge 680 (837)
T Consensus 617 ~~~CP~C~~g~l~~r~sk~g~~f~gCs~yp~C~~~~~~------------~p~~~~Cp~Cg~~~~~~~~~~g~~~~C~n 683 (692)
T PRK08938 617 GVTCPKCHKGQVIERKSKKNRIFYGCDRYPECDFVSWD------------KPIGRDCPKCGHYLVEKKVKKGKQVQCSN 683 (692)
T ss_pred CCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCEECCC------------CCCCCCCCCCCCCCEEEECCCCCEEECCC
T ss_conf 88295999974575514789877748989989831678------------87488499999604268557888797899