BLAST/PSIBLAST alignment of GI: 254780306 and GI: 209548898 at iteration 1
>gi|209548898|ref|YP_002280815.1| DNA topoisomerase I [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 884
>gi|209534654|gb|ACI54589.1| DNA topoisomerase I [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 884
 Score = 1066 bits (2757), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/842 (58%), Positives = 645/842 (76%), Gaps = 8/842 (0%)

Query: 1   MNVIIVESPAKAKTISKYLGSNYKVLSSFGHIRDLPAKKGSVLPEKEFEMIWNIDPSSQK 60
           MNV++VESPAKAKTI+KYLGS YKVL+SFGH+RDLPAK GSVLP+++FEM+W +D +S K
Sbjct: 1   MNVVVVESPAKAKTINKYLGSGYKVLASFGHVRDLPAKDGSVLPDQDFEMLWEVDGASAK 60

Query: 61  HLQNIIHAVKSSTILILATDPDREGEAISWHVLDVLRQKNLIEKTKIQRVSFNAITKQVV 120
            +++I  AVKSS  L LATDPDREGEAISWHVLD+L +K ++    ++RV FNAITK+ V
Sbjct: 61  RMKDIADAVKSSDGLFLATDPDREGEAISWHVLDMLNKKRVLNGKPVKRVVFNAITKKAV 120

Query: 121 LNAMKSPRDINLDLVNAYLARRALDYLVGFNLSPILWQKLPGARSAGRVQSVALRLICNR 180
           L+AM  PRDI++ LV+AYLARRALDYLVGFNLSP+LW+KLPGARSAGRVQSVALRL+C+R
Sbjct: 121 LDAMADPRDIDVPLVDAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVALRLVCDR 180

Query: 181 ENQIESFVSEEYWSLSVLLETPRNDKFTAHLTDFNGQRIEKKSISNKKEADDLISFVKKA 240
           E++IE F+SEEYW++S LL+TPR D+F A L   NG+R++ ++I N ++A  L + +  A
Sbjct: 181 ESEIERFISEEYWNISALLKTPRGDEFEARLVSANGKRLQPRAIGNGEDAGRLKALLDGA 240

Query: 241 TYSVEKIENKPIKRNPWPAFTTSTLQQVASSRLGFSASHTMRIAQKLYEGIDVNGEIVGL 300
           +Y V+ +E KP+KRNP P FTTSTLQQ ASS LGFSAS TM+IAQKLYEG+D+ GE VGL
Sbjct: 241 SYVVDTVEAKPVKRNPGPPFTTSTLQQAASSNLGFSASRTMQIAQKLYEGVDIGGETVGL 300

Query: 301 ITYMRTDGVHMSPDALEAVRRSITSHYGDHYLPEKPRIYSSKSKNAQEAHEAIRPNDFDF 360
           ITYMRTDGV M+P+A++A R +I   +G+ Y+PEK R YS+K+KNAQEAHEAIRP DF  
Sbjct: 301 ITYMRTDGVQMAPEAIDAARSAIVDQFGERYMPEKARFYSTKAKNAQEAHEAIRPTDFYR 360

Query: 361 LPSKMKQFLDSDQFQLYNLIWKRSVASQMASAKFERTTVNIIATYNDQIGHLRTTGSLLC 420
            P +++QFLD+DQ +LY+LIWKR +ASQMASA+ ERTT  I A    +   LR  GS++ 
Sbjct: 361 SPDRVRQFLDADQIRLYDLIWKRGIASQMASAEIERTTAEITADNKGEKAGLRAVGSVIR 420

Query: 421 FDGFLKVWENQY---DQEKNSEEDILLPYISANEQLIATETNASQHFTEPPPRYSESSLI 477
           FDGF+  + +Q    +Q  + +ED  LP I+A E L   + N++QHFTEPPPRYSE+SLI
Sbjct: 421 FDGFIAAYTDQKEDGEQSDDGDEDGRLPEINARETLAKQKINSTQHFTEPPPRYSEASLI 480

Query: 478 KKMEEIGIGRPSTYATILETLYKRKYVIAEKRKILPQNTGRIVTAFLENFFSQYVEYDFT 537
           KKMEE+GIGRPSTYA  L TL  R YV  +KRK++PQ  GR+VTAFLE+FF++YVEYDFT
Sbjct: 481 KKMEELGIGRPSTYAATLATLRDRDYVTIDKRKLIPQAKGRLVTAFLESFFTKYVEYDFT 540

Query: 538 ADLEEKLDEISTGKLNWKEVLHEFWEEFIEKIDSIKKLRISNVLDILNDTLSSVIFPPKE 597
           ADLEEKLD IS G+LNWK+VL +FW++F  +I+  K+LR++NVLD LN+ L+ ++FP +E
Sbjct: 541 ADLEEKLDRISAGELNWKQVLRDFWKDFFAQIEDTKELRVTNVLDSLNEALAPLVFPKRE 600

Query: 598 NNEDSRTCPECHTHSLSLKLSSKYGAFVGCTNYPECKYTRQLTS---NPQDIPEMKESVL 654
           +  D R C  C T +LSLKL  KYGAFVGC+NYPEC YTRQL+S      D   + E   
Sbjct: 601 DGSDPRICQVCGTGNLSLKL-GKYGAFVGCSNYPECNYTRQLSSENGGEADGAAINEPKN 659

Query: 655 LGNDLETKESVTLRSGRFGLYVQRGDGKDAKRCSLPKTWKSDSVDYDKAMSLLSLPREIG 714
           LG D  T E +TLRSGRFG Y+QRGDGK+AKR SLPK WK + +DY+KAM+L+SLPR+IG
Sbjct: 660 LGTDPTTGEELTLRSGRFGPYIQRGDGKEAKRASLPKGWKPEDIDYEKAMALISLPRDIG 719

Query: 715 IHPETQKNIIAGTGKYGYYLNHDGAYTKLESIEQVLTIDLEQAISCITEK-KKIEKSSRK 773
            HPE+ K I +G G+YG +L HDG+Y  LE+IE V ++ L +A++ I EK  +      +
Sbjct: 720 KHPESGKMISSGIGRYGPFLLHDGSYANLETIEDVFSVGLNRAVTVIAEKANQAPGRGSR 779

Query: 774 NSKNQGHVIGTHPEGGSITVHNGRYGPYLHWKKINASLSKEESPDTVDLEKALKILNIKK 833
            +      +G HP+GG+ITV +G+YGPY++W K+NA+L K + P  + +E+AL ++  K 
Sbjct: 780 GTPAALKTLGDHPDGGAITVRDGKYGPYVNWGKVNATLPKGKDPQAITVEEALALITEKA 839

Query: 834 QK 835
            K
Sbjct: 840 GK 841