BLAST/PSIBLAST alignment of GI: 254780306 and GI: 209548898 at iteration 1
>gi|209548898|ref|YP_002280815.1| DNA topoisomerase I [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 884
>gi|209534654|gb|ACI54589.1| DNA topoisomerase I [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 884
Score = 1066 bits (2757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/842 (58%), Positives = 645/842 (76%), Gaps = 8/842 (0%)
Query: 1 MNVIIVESPAKAKTISKYLGSNYKVLSSFGHIRDLPAKKGSVLPEKEFEMIWNIDPSSQK 60
MNV++VESPAKAKTI+KYLGS YKVL+SFGH+RDLPAK GSVLP+++FEM+W +D +S K
Sbjct: 1 MNVVVVESPAKAKTINKYLGSGYKVLASFGHVRDLPAKDGSVLPDQDFEMLWEVDGASAK 60
Query: 61 HLQNIIHAVKSSTILILATDPDREGEAISWHVLDVLRQKNLIEKTKIQRVSFNAITKQVV 120
+++I AVKSS L LATDPDREGEAISWHVLD+L +K ++ ++RV FNAITK+ V
Sbjct: 61 RMKDIADAVKSSDGLFLATDPDREGEAISWHVLDMLNKKRVLNGKPVKRVVFNAITKKAV 120
Query: 121 LNAMKSPRDINLDLVNAYLARRALDYLVGFNLSPILWQKLPGARSAGRVQSVALRLICNR 180
L+AM PRDI++ LV+AYLARRALDYLVGFNLSP+LW+KLPGARSAGRVQSVALRL+C+R
Sbjct: 121 LDAMADPRDIDVPLVDAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVALRLVCDR 180
Query: 181 ENQIESFVSEEYWSLSVLLETPRNDKFTAHLTDFNGQRIEKKSISNKKEADDLISFVKKA 240
E++IE F+SEEYW++S LL+TPR D+F A L NG+R++ ++I N ++A L + + A
Sbjct: 181 ESEIERFISEEYWNISALLKTPRGDEFEARLVSANGKRLQPRAIGNGEDAGRLKALLDGA 240
Query: 241 TYSVEKIENKPIKRNPWPAFTTSTLQQVASSRLGFSASHTMRIAQKLYEGIDVNGEIVGL 300
+Y V+ +E KP+KRNP P FTTSTLQQ ASS LGFSAS TM+IAQKLYEG+D+ GE VGL
Sbjct: 241 SYVVDTVEAKPVKRNPGPPFTTSTLQQAASSNLGFSASRTMQIAQKLYEGVDIGGETVGL 300
Query: 301 ITYMRTDGVHMSPDALEAVRRSITSHYGDHYLPEKPRIYSSKSKNAQEAHEAIRPNDFDF 360
ITYMRTDGV M+P+A++A R +I +G+ Y+PEK R YS+K+KNAQEAHEAIRP DF
Sbjct: 301 ITYMRTDGVQMAPEAIDAARSAIVDQFGERYMPEKARFYSTKAKNAQEAHEAIRPTDFYR 360
Query: 361 LPSKMKQFLDSDQFQLYNLIWKRSVASQMASAKFERTTVNIIATYNDQIGHLRTTGSLLC 420
P +++QFLD+DQ +LY+LIWKR +ASQMASA+ ERTT I A + LR GS++
Sbjct: 361 SPDRVRQFLDADQIRLYDLIWKRGIASQMASAEIERTTAEITADNKGEKAGLRAVGSVIR 420
Query: 421 FDGFLKVWENQY---DQEKNSEEDILLPYISANEQLIATETNASQHFTEPPPRYSESSLI 477
FDGF+ + +Q +Q + +ED LP I+A E L + N++QHFTEPPPRYSE+SLI
Sbjct: 421 FDGFIAAYTDQKEDGEQSDDGDEDGRLPEINARETLAKQKINSTQHFTEPPPRYSEASLI 480
Query: 478 KKMEEIGIGRPSTYATILETLYKRKYVIAEKRKILPQNTGRIVTAFLENFFSQYVEYDFT 537
KKMEE+GIGRPSTYA L TL R YV +KRK++PQ GR+VTAFLE+FF++YVEYDFT
Sbjct: 481 KKMEELGIGRPSTYAATLATLRDRDYVTIDKRKLIPQAKGRLVTAFLESFFTKYVEYDFT 540
Query: 538 ADLEEKLDEISTGKLNWKEVLHEFWEEFIEKIDSIKKLRISNVLDILNDTLSSVIFPPKE 597
ADLEEKLD IS G+LNWK+VL +FW++F +I+ K+LR++NVLD LN+ L+ ++FP +E
Sbjct: 541 ADLEEKLDRISAGELNWKQVLRDFWKDFFAQIEDTKELRVTNVLDSLNEALAPLVFPKRE 600
Query: 598 NNEDSRTCPECHTHSLSLKLSSKYGAFVGCTNYPECKYTRQLTS---NPQDIPEMKESVL 654
+ D R C C T +LSLKL KYGAFVGC+NYPEC YTRQL+S D + E
Sbjct: 601 DGSDPRICQVCGTGNLSLKL-GKYGAFVGCSNYPECNYTRQLSSENGGEADGAAINEPKN 659
Query: 655 LGNDLETKESVTLRSGRFGLYVQRGDGKDAKRCSLPKTWKSDSVDYDKAMSLLSLPREIG 714
LG D T E +TLRSGRFG Y+QRGDGK+AKR SLPK WK + +DY+KAM+L+SLPR+IG
Sbjct: 660 LGTDPTTGEELTLRSGRFGPYIQRGDGKEAKRASLPKGWKPEDIDYEKAMALISLPRDIG 719
Query: 715 IHPETQKNIIAGTGKYGYYLNHDGAYTKLESIEQVLTIDLEQAISCITEK-KKIEKSSRK 773
HPE+ K I +G G+YG +L HDG+Y LE+IE V ++ L +A++ I EK + +
Sbjct: 720 KHPESGKMISSGIGRYGPFLLHDGSYANLETIEDVFSVGLNRAVTVIAEKANQAPGRGSR 779
Query: 774 NSKNQGHVIGTHPEGGSITVHNGRYGPYLHWKKINASLSKEESPDTVDLEKALKILNIKK 833
+ +G HP+GG+ITV +G+YGPY++W K+NA+L K + P + +E+AL ++ K
Sbjct: 780 GTPAALKTLGDHPDGGAITVRDGKYGPYVNWGKVNATLPKGKDPQAITVEEALALITEKA 839
Query: 834 QK 835
K
Sbjct: 840 GK 841