BLAST/PSIBLAST alignment of GI: 254780306 and GI: 227821655 at iteration 1
>gi|227821655|ref|YP_002825625.1| DNA topoisomerase I [Sinorhizobium fredii NGR234] Length = 890
>gi|227340654|gb|ACP24872.1| DNA topoisomerase I [Sinorhizobium fredii NGR234] Length = 890
 Score = 1064 bits (2751), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/841 (58%), Positives = 642/841 (76%), Gaps = 7/841 (0%)

Query: 1   MNVIIVESPAKAKTISKYLGSNYKVLSSFGHIRDLPAKKGSVLPEKEFEMIWNIDPSSQK 60
           MNV++VESP+KAKTI+KYLG  YKVL+SFGH+RDLPAK GSV P+++FEM W +D +S K
Sbjct: 1   MNVVVVESPSKAKTINKYLGPGYKVLASFGHVRDLPAKDGSVRPDEDFEMSWEVDGASAK 60

Query: 61  HLQNIIHAVKSSTILILATDPDREGEAISWHVLDVLRQKNLIEKTKIQRVSFNAITKQVV 120
            +++I  AVKSS  LILATDPDREGEAISWHVLD+L++K +I    ++RV FNAITK+ V
Sbjct: 61  RMKDIADAVKSSDGLILATDPDREGEAISWHVLDLLKKKKVIGDKPVKRVVFNAITKKAV 120

Query: 121 LNAMKSPRDINLDLVNAYLARRALDYLVGFNLSPILWQKLPGARSAGRVQSVALRLICNR 180
           L+AM  PRDI++ LV+AYLARRALDYLVGFNLSP+LW+KLPGARSAGRVQSVALRL+C+R
Sbjct: 121 LDAMADPRDIDISLVDAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVALRLVCDR 180

Query: 181 ENQIESFVSEEYWSLSVLLETPRNDKFTAHLTDFNGQRIEKKSISNKKEADDLISFVKKA 240
           E +IE FV+EEYW++S LL+TPR D+F A L   +G+R++ K++ N +EA+ L + +  A
Sbjct: 181 EAEIERFVTEEYWNISALLKTPRGDEFEARLVSADGKRLQPKAVGNGEEANRLKALLDGA 240

Query: 241 TYSVEKIENKPIKRNPWPAFTTSTLQQVASSRLGFSASHTMRIAQKLYEGIDVNGEIVGL 300
           +Y VE +E KP+KRNP P FTTSTLQQ ASS+LGFSAS TM++AQKLYEG+DV GE VGL
Sbjct: 241 SYVVESVEAKPVKRNPGPPFTTSTLQQAASSKLGFSASRTMQVAQKLYEGVDVGGETVGL 300

Query: 301 ITYMRTDGVHMSPDALEAVRRSITSHYGDHYLPEKPRIYSSKSKNAQEAHEAIRPNDFDF 360
           ITYMRTDGV M+P+A++A RR+I S +G  YLPEKPR YS+K+KNAQEAHEAIRP DF+ 
Sbjct: 301 ITYMRTDGVQMAPEAIDAARRAIGSQFGTRYLPEKPRFYSTKAKNAQEAHEAIRPTDFNR 360

Query: 361 LPSKMKQFLDSDQFQLYNLIWKRSVASQMASAKFERTTVNIIATYNDQIGHLRTTGSLLC 420
            P ++++FLD D  +LY+LIWKR +ASQMASA+ ERTT  I A    +   LR TGS++ 
Sbjct: 361 TPDEVRRFLDGDMLKLYDLIWKRGIASQMASAEIERTTAEIAADNGGKKAGLRATGSVIR 420

Query: 421 FDGFLKVWENQY---DQEKNSEEDILLPYISANEQLIATETNASQHFTEPPPRYSESSLI 477
           FDGF+  + +     +Q  + +E   LP I+A E L   + NA+QHFTEPPPRYSE++LI
Sbjct: 421 FDGFIAAYTDMKEDGEQADDGDESGRLPEINARENLAKQKINATQHFTEPPPRYSEATLI 480

Query: 478 KKMEEIGIGRPSTYATILETLYKRKYVIAEKRKILPQNTGRIVTAFLENFFSQYVEYDFT 537
           KKMEE+GIGRPSTYA  + TL  R YV  +KRK++PQ  GR+VTAFLE+FF++YVEYDFT
Sbjct: 481 KKMEELGIGRPSTYAATISTLVDRDYVEIDKRKLMPQAKGRLVTAFLESFFTRYVEYDFT 540

Query: 538 ADLEEKLDEISTGKLNWKEVLHEFWEEFIEKIDSIKKLRISNVLDILNDTLSSVIFPPKE 597
           A LEEKLD+IS G+LNWK+VL EFW++F  +I+  K+LR++NVLD LN+ L+ ++FP +E
Sbjct: 541 ASLEEKLDQISAGELNWKDVLREFWKDFFSQIEDTKELRVTNVLDALNEELAPLVFPKRE 600

Query: 598 NNEDSRTCPECHTHSLSLKLSSKYGAFVGCTNYPECKYTRQLTSNPQDIPEM---KESVL 654
           +  D RTC  C T  LSLKL  KYGAFVGC+NYPEC YTRQL+S+     E     E   
Sbjct: 601 DGGDPRTCQVCGTGKLSLKL-GKYGAFVGCSNYPECNYTRQLSSDSNGDAEAAVSNEPQS 659

Query: 655 LGNDLETKESVTLRSGRFGLYVQRGDGKDAKRCSLPKTWKSDSVDYDKAMSLLSLPREIG 714
           LG D  T E +TLRSGRFG YVQRGDGKDAKR SLPK W   ++D++KA++LLSLPR+IG
Sbjct: 660 LGKDPHTGEEITLRSGRFGPYVQRGDGKDAKRASLPKGWTPATIDHEKALALLSLPRDIG 719

Query: 715 IHPETQKNIIAGTGKYGYYLNHDGAYTKLESIEQVLTIDLEQAISCITEKKKIEKSSRKN 774
            HPET K I  G G+YG ++ HDG Y  LES+E V +I L +A+S + +K+       + 
Sbjct: 720 KHPETGKMISTGIGRYGPFVLHDGTYANLESVEDVFSIGLNRAVSALADKQSKGAGGGRT 779

Query: 775 SKNQGHVIGTHPEGGSITVHNGRYGPYLHWKKINASLSKEESPDTVDLEKALKILNIKKQ 834
           +      +G HP+GG +TV +GR+GPY++W K+NA+L K + P +V +E+AL ++  +  
Sbjct: 780 AAAALKELGEHPDGGVMTVRDGRFGPYVNWGKVNATLPKGKDPQSVTVEEALALIAERAA 839

Query: 835 K 835
           K
Sbjct: 840 K 840