RPSBLAST alignment for GI: 254780306 and conserved domain: PRK05582
>gnl|CDD|180146 PRK05582, PRK05582, DNA topoisomerase I; Validated. Length = 650
Score = 743 bits (1922), Expect = 0.0
Identities = 278/639 (43%), Positives = 396/639 (61%), Gaps = 37/639 (5%)
Query: 2 NVIIVESPAKAKTISKYLGSNYKVLSSFGHIRDLPAKKGSVLPEKEFEMIWNIDPSSQKH 61
++IVESPAKAKTI KYLG NYKV++S GHIRDLP + + E FE +
Sbjct: 4 KLVIVESPAKAKTIEKYLGKNYKVVASMGHIRDLPKSQLGIDIENNFEPKYITIRGKGPV 63
Query: 62 LQNIIHAVKSSTILILATDPDREGEAISWHVLDVLRQKNLIEKTKIQRVSFNAITKQVVL 121
++ + A K + + LATDPDREGEAI+WH+ +L +++ + R+ FN ITK +
Sbjct: 64 IKELKKAAKKAKKVYLATDPDREGEAIAWHLAHILG----LDEKEKNRIVFNEITKDAIK 119
Query: 122 NAMKSPRDINLDLVNAYLARRALDYLVGFNLSPILWQKLPGARSAGRVQSVALRLICNRE 181
NA K+PR I+++LV+A ARR LD LVG+ LSP+LW+K+ SAGRVQSVAL+LI +RE
Sbjct: 120 NAFKNPRKIDMNLVDAQQARRILDRLVGYKLSPLLWKKVKKGLSAGRVQSVALKLIIDRE 179
Query: 182 NQIESFVSEEYWSLSVLLETPRNDKFTAHLTDFNGQRIEKKSISNKKEADDLISFVKKAT 241
+I +FV EEYW++ + KF A + G +K + N+++ ++++ +KK
Sbjct: 180 KEIRAFVPEEYWTIDAEFK-KGKKKFEASFYGYKG---KKIELKNEEDVKEILAELKKKD 235
Query: 242 YSVEKIENKPIKRNPWPAFTTSTLQQVASSRLGFSASHTMRIAQKLYEGIDVNGE-IVGL 300
+ V K++ K KRNP P FTTSTLQQ A+ +L FS TM IAQ+LYEGID+ + VGL
Sbjct: 236 FKVSKVKKKERKRNPPPPFTTSTLQQEAARKLNFSTKKTMMIAQQLYEGIDLGKQGTVGL 295
Query: 301 ITYMRTDGVHMSPDALEAVRRSITSHYGDHYLPEKPRIYSSKSKNAQEAHEAIRPNDFDF 360
ITYMRTD +S A E R I YG YLP+KP++Y K AQ+AHEAIRP
Sbjct: 296 ITYMRTDSTRISDTAQEEAREFIEEKYGKEYLPKKPKVYKKK-SGAQDAHEAIRPTSVFL 354
Query: 361 LPSKMKQFLDSDQFQLYNLIWKRSVASQMASAKFERTTVNIIATYNDQIGHLRTTGSLLC 420
P K++L DQ +LY LIW R VASQMA A F+ +V++ N R +GS +
Sbjct: 355 TPESAKKYLTKDQLKLYKLIWNRFVASQMAPAVFDTVSVDLEN--NGVK--FRASGSKVK 410
Query: 421 FDGFLKVWENQYDQEKNSEEDILLPYISANEQLIATETNASQHFTEPPPRYSESSLIKKM 480
FDGF+KV+ + E+D +LP + E++ + QHFT+PP RY+E+SLIK +
Sbjct: 411 FDGFMKVYV------GDEEKDKMLPELEEGEKVKLKKIEPEQHFTQPPARYTEASLIKTL 464
Query: 481 EEIGIGRPSTYATILETLYKRKYVIAEKRKILPQNTGRIVTAFLENFFSQYVEYDFTADL 540
EE+GIGRPSTYA + T+ KR YV EK++++P G IV LE FF V+ +FTA++
Sbjct: 465 EELGIGRPSTYAPTISTIQKRGYVKLEKKRLVPTELGEIVNELLEEFFPDIVDVEFTAEM 524
Query: 541 EEKLDEISTGKLNWKEVLHEFWEEFIEKIDSIKKLRISNVLDILNDTLSSVIFPPKENNE 600
EEKLDEI GK +WK+VL +F++ F ++I+ +K + + + E
Sbjct: 525 EEKLDEIEEGKEDWKKVLDDFYKPFEKEIEKAEK------------EIEKIKIKDEPAGE 572
Query: 601 DSRTCPECHTHSLSLKLSSKYGAFVGCTNYPECKYTRQL 639
D CP+C + +K+ +YG F+ C+N+P+C+ T+ +
Sbjct: 573 D---CPKCG-SPMVIKM-GRYGKFIACSNFPDCRNTKPI 606