RPSBLAST alignment for GI: 254780306 and conserved domain: PRK07220

>gnl|CDD|180892 PRK07220, PRK07220, DNA topoisomerase I; Validated. Length = 740
 Score =  219 bits (560), Expect = 2e-57
 Identities = 178/594 (29%), Positives = 274/594 (46%), Gaps = 72/594 (12%)

Query: 70  KSSTILILATDPDREGEAISWHVLDVLRQKNLIEKTKIQRVSFNAITKQVVLNAMKSPRD 129
           K +  + +ATD DREGE I    L+++++ N     K  RV ++AITK+ +  A  +P +
Sbjct: 96  KEADRVTIATDYDREGELIGVEALNIIKKVN--PDIKFDRVRYSAITKKEIERAFSNPVE 153

Query: 130 INLDLVNAYLARRALDYLVGFNLSPILWQKLPGAR------SAGRVQSVALRLICNRENQ 183
           ++ +L +A  +R+ +D + G  L+   +  L   R      S GRVQS  L LI +RE +
Sbjct: 154 VDFNLADAGHSRQVIDLVWGAALTR--YISLAAGRLGKMFLSVGRVQSPTLALIVDREKE 211

Query: 184 IESFVSEEYWSLSVLLETPRNDKFTAHLTDFNGQRIEKKSISNKKEADDLISFVKKATYS 243
            E+FV   YW +   LE      F A        +   +    K+EAD +   + K T  
Sbjct: 212 REAFVPTPYWEIYATLENNGET-FVA--------QHSTRRFWEKEEADRVFEKLGK-TAE 261

Query: 244 VEKIENKPIKRNPWPAFTTSTLQQVASSRLGFSASHTMRIAQKLYEGIDVNGEIVGLITY 303
           V ++E       P   F T+     A+S +GFSA++ MRIA+ LY     NG     I+Y
Sbjct: 262 VTEVEKGTKTDKPPTPFNTTEFISAANS-IGFSAANAMRIAESLY----TNG----YISY 312

Query: 304 MRTDGVHMSPDALEAVRRSI----TSHYGDH--YLPEKPRIYSSKSKNAQEAHEAIRPND 357
            RTD   + P++L+ +R  I       +G++   L EK  +  ++ K     H  I P  
Sbjct: 313 PRTDNT-VYPESLD-LREQIEIFAEGPFGEYAQKLLEKGELVPTRGKKETTDHPPIYPAS 370

Query: 358 FDFLPSKMKQFLDSDQFQLYNLIWKRSVASQMASAKFERTTVNIIATYNDQIG--HLRTT 415
                   K  L  D++++Y L+ +R  A+    A++E   +         IG    R  
Sbjct: 371 -----LAKKSELKEDEWKVYELVVRRFFATFAGPAEWETMKLRF------DIGGEEFRAN 419

Query: 416 GSLLCFDGFLKVWENQYDQEKNSEEDILLPYISANEQLIATETNASQHFTEPPPRYSESS 475
           GS L   G+   W   Y    N+ ED LLP +S  E+L   +       T+PP RY +  
Sbjct: 420 GSRLTEPGWR--WYYPY----NAPEDRLLPELSEGEELKVKKKEMLDKETQPPGRYGQGR 473

Query: 476 LIKKMEEIGIGRPSTYATILETLYKRKYVIAEKRKILPQNTGRIVTAFLENFFSQYVEYD 535
           LIK ME++G+G  +T   I+  LY R Y+      I P NT   V   LE +     + D
Sbjct: 474 LIKLMEDLGLGTKATRHEIISKLYSRAYI--HGNPIQPTNTAFAVVDALEKYAPTITKPD 531

Query: 536 FTADLEEKLDEISTGKLNWKEVLHEFWEEFIEKIDSIKKLRISNVLDILNDTLSSVIFPP 595
            T+ LEE +D+I+ GK+    VL E  E   +  D + K R   + + L + L       
Sbjct: 532 MTSRLEEDMDKIAEGKIKEDAVLEESREMLEQVFDELDKNR-EKIRESLREGL------- 583

Query: 596 KENNEDSR--TCPECHTHSLSLKLSSKYGAFVGCTNYPECKYTRQLTSNPQDIP 647
               ED     CP C +  L ++ S +   F+GC  YPEC ++  L  + Q I 
Sbjct: 584 ---REDKIIGKCPLCGS-DLMVRRSKRGSRFIGCEGYPECTFSLPLPKSGQIIV 633