RPSBLAST alignment for GI: 254780306 and conserved domain: PRK07220
>gnl|CDD|180892 PRK07220, PRK07220, DNA topoisomerase I; Validated. Length = 740
Score = 219 bits (560), Expect = 2e-57
Identities = 178/594 (29%), Positives = 274/594 (46%), Gaps = 72/594 (12%)
Query: 70 KSSTILILATDPDREGEAISWHVLDVLRQKNLIEKTKIQRVSFNAITKQVVLNAMKSPRD 129
K + + +ATD DREGE I L+++++ N K RV ++AITK+ + A +P +
Sbjct: 96 KEADRVTIATDYDREGELIGVEALNIIKKVN--PDIKFDRVRYSAITKKEIERAFSNPVE 153
Query: 130 INLDLVNAYLARRALDYLVGFNLSPILWQKLPGAR------SAGRVQSVALRLICNRENQ 183
++ +L +A +R+ +D + G L+ + L R S GRVQS L LI +RE +
Sbjct: 154 VDFNLADAGHSRQVIDLVWGAALTR--YISLAAGRLGKMFLSVGRVQSPTLALIVDREKE 211
Query: 184 IESFVSEEYWSLSVLLETPRNDKFTAHLTDFNGQRIEKKSISNKKEADDLISFVKKATYS 243
E+FV YW + LE F A + + K+EAD + + K T
Sbjct: 212 REAFVPTPYWEIYATLENNGET-FVA--------QHSTRRFWEKEEADRVFEKLGK-TAE 261
Query: 244 VEKIENKPIKRNPWPAFTTSTLQQVASSRLGFSASHTMRIAQKLYEGIDVNGEIVGLITY 303
V ++E P F T+ A+S +GFSA++ MRIA+ LY NG I+Y
Sbjct: 262 VTEVEKGTKTDKPPTPFNTTEFISAANS-IGFSAANAMRIAESLY----TNG----YISY 312
Query: 304 MRTDGVHMSPDALEAVRRSI----TSHYGDH--YLPEKPRIYSSKSKNAQEAHEAIRPND 357
RTD + P++L+ +R I +G++ L EK + ++ K H I P
Sbjct: 313 PRTDNT-VYPESLD-LREQIEIFAEGPFGEYAQKLLEKGELVPTRGKKETTDHPPIYPAS 370
Query: 358 FDFLPSKMKQFLDSDQFQLYNLIWKRSVASQMASAKFERTTVNIIATYNDQIG--HLRTT 415
K L D++++Y L+ +R A+ A++E + IG R
Sbjct: 371 -----LAKKSELKEDEWKVYELVVRRFFATFAGPAEWETMKLRF------DIGGEEFRAN 419
Query: 416 GSLLCFDGFLKVWENQYDQEKNSEEDILLPYISANEQLIATETNASQHFTEPPPRYSESS 475
GS L G+ W Y N+ ED LLP +S E+L + T+PP RY +
Sbjct: 420 GSRLTEPGWR--WYYPY----NAPEDRLLPELSEGEELKVKKKEMLDKETQPPGRYGQGR 473
Query: 476 LIKKMEEIGIGRPSTYATILETLYKRKYVIAEKRKILPQNTGRIVTAFLENFFSQYVEYD 535
LIK ME++G+G +T I+ LY R Y+ I P NT V LE + + D
Sbjct: 474 LIKLMEDLGLGTKATRHEIISKLYSRAYI--HGNPIQPTNTAFAVVDALEKYAPTITKPD 531
Query: 536 FTADLEEKLDEISTGKLNWKEVLHEFWEEFIEKIDSIKKLRISNVLDILNDTLSSVIFPP 595
T+ LEE +D+I+ GK+ VL E E + D + K R + + L + L
Sbjct: 532 MTSRLEEDMDKIAEGKIKEDAVLEESREMLEQVFDELDKNR-EKIRESLREGL------- 583
Query: 596 KENNEDSR--TCPECHTHSLSLKLSSKYGAFVGCTNYPECKYTRQLTSNPQDIP 647
ED CP C + L ++ S + F+GC YPEC ++ L + Q I
Sbjct: 584 ---REDKIIGKCPLCGS-DLMVRRSKRGSRFIGCEGYPECTFSLPLPKSGQIIV 633