RPSBLAST alignment for GI: 254780306 and conserved domain: PRK08173
>gnl|CDD|181267 PRK08173, PRK08173, DNA topoisomerase III; Validated. Length = 862
Score = 150 bits (381), Expect = 1e-36
Identities = 162/643 (25%), Positives = 270/643 (41%), Gaps = 138/643 (21%)
Query: 4 IIVESPAKAKTISKYLG----------SNYKVLSS-FGHIRDLPA------KKGS----- 41
II E P+ A I++ LG S+ VLSS GH+ ++ A K+G
Sbjct: 6 IIAEKPSVANDIARALGGFTKHDEYFESDEYVLSSAVGHLLEIAAPEEYEVKRGKWSFAH 65
Query: 42 --VLPEKEFEMIWNIDPSSQKHLQNIIHAVKSS--TILILATDPDREGEAISWHVLDVLR 97
V+P F++ N ++ L+ + +K T LI A D REGE I +
Sbjct: 66 LPVIPPH-FDL--NPIAKTESRLKVLTKLIKRKDVTRLINACDAGREGELIFRLIA---- 118
Query: 98 QKNLIEKTKIQRVSFNAITKQVVLNAMKSPRDIN--LDLVNAYLARRALDYLVGFNLSPI 155
++ K ++R+ ++T Q + + + R L +A R D+LVG N
Sbjct: 119 -QHAKAKKPVKRLWLQSMTPQAIRDGFANLRSDEDMQPLADAARCRSEADWLVGIN---- 173
Query: 156 LWQKLPGARS---------------AGRVQSVALRLICNRENQIESFVSEEYWSLSVLLE 200
G R+ GRVQ+ L ++ RE +I FV +YW +
Sbjct: 174 ------GTRAMTAFNSKGGGFFLTTVGRVQTPTLSIVVEREEKIRRFVPRDYWEVRAEFV 227
Query: 201 TPR--------NDKFTAHLTDFNGQRIEKKSISNKKEADDLISFVKKATYSVEKIENKPI 252
+ KF +F+ ++ + + ++ A+ +++ + +V + E+KP
Sbjct: 228 AAAGFYEGRWFDPKFKK--DEFDPEKRASR-LWSEAAAEAIVAACRGKPGTVTE-ESKPS 283
Query: 253 KRNPWPAFTTSTLQQVASSRLGFSASHTMRIAQKLYEGIDVNGEIVGLITYMRTDGVHMS 312
+ F ++LQ+ A+ R GFSA +T+ +AQ LYE V +TY RTD +
Sbjct: 284 TQLSPLLFDLTSLQREANGRFGFSAKNTLGLAQALYEKHKV-------LTYPRTDSRALP 336
Query: 313 PDALEAVRRSITSHYGD-HYLPEKPRIYSSKSKNAQEAHEAIRPNDFDFLPSKMKQFLDS 371
D L V++++ +YLP +I ++PN F SK+ S
Sbjct: 337 EDYLGTVKQTLEMLKESNNYLPHAKQILDKG---------WVKPNKRIFDNSKI-----S 382
Query: 372 DQF-----------------QLYNLIWKRSVASQMASAKFERTTVNIIATYNDQIGHLRT 414
D F +LY+L+ KR +A +A+F TT I H +T
Sbjct: 383 DHFAIIPTLQAPKSLSEPEQKLYDLVVKRFLAVFFPAAEFLVTTR--ITEVAGH--HFKT 438
Query: 415 TGSLLCFDGFLKVWENQYDQEKNSEEDILLPYISANEQLIATETNASQHFTEPPPRYSES 474
G +L G+L V Y +E + L+P + E++ + A T+PP RY+E+
Sbjct: 439 EGKVLVNPGWLAV----YGKEAQGADANLVP-VQKGEKVKTDKIEAVALTTKPPARYNEA 493
Query: 475 SLIKKME----------------EIGIGRPSTYATILETLYKRKYVIAEKRKILPQNTGR 518
+L+ ME E G+G P+T A I+E L KY++ E R+++P
Sbjct: 494 TLLSAMEGAGKLVEDDELREAMAEKGLGTPATRAAIIEGLLGEKYLVREGRELIPTAKAF 553
Query: 519 IVTAFLENF-FSQYVEYDFTADLEEKLDEISTGKLNWKEVLHE 560
+ L + + T + E KL +I GKL+ + E
Sbjct: 554 QLMTLLRGLGVEELTSPELTGEWEYKLSQIERGKLSRDAFMQE 596