RPSBLAST alignment for GI: 254780306 and conserved domain: PRK14973
>gnl|CDD|184936 PRK14973, PRK14973, DNA topoisomerase I; Provisional. Length = 936
Score = 214 bits (546), Expect = 9e-56
Identities = 170/595 (28%), Positives = 265/595 (44%), Gaps = 74/595 (12%)
Query: 58 SQKHLQNIIHAV-KSSTILILATDPDREGEAISWHVLDVLRQKNLIEKTKIQRVSFNAIT 116
++K + +I + K + + +ATD D EGE I +++R N K I R F+AIT
Sbjct: 82 TEKKIVGLIQKLAKKADRVTIATDFDTEGELIGKEAYELVRAVN--PKVPIDRARFSAIT 139
Query: 117 KQVVLNAMKSPRDINLDLVNAYLARRALDYLVGFNLSPILWQKLPGAR------SAGRVQ 170
K+ ++ A P D++ L A AR+ +D + G +L+ + L R S GRVQ
Sbjct: 140 KEEIVTAFAEPTDLDFALAAAGEARQIIDLIWGASLTRFI--SLAAHRGGDNILSVGRVQ 197
Query: 171 SVALRLICNRENQIESFVSEEYWSLSVLLETPRNDKFTAHLTDFNGQRIEKKSI----SN 226
S L +I +RE +IE+FV E+YW LS+ T+ +G+ IE + ++
Sbjct: 198 SPTLAMIVDREKEIEAFVPEKYWMLSLA-------------TEKDGEGIEARHTHGRFTD 244
Query: 227 KKEADDLISFVKKATYSVEKIENKPIKRNPWPAFTTSTLQQVASSRLGFSASHTMRIAQK 286
A+ K+ E E + R P P TT+ + VA+SRLGFSA++ MRIA+
Sbjct: 245 SAAAEAAYDATKEPLVVTEVKEGHKVDRAPTPFDTTTFI--VAASRLGFSAANAMRIAED 302
Query: 287 LYEGIDVNGEIVGLITYMRTDGVHMSP-----DALEAVRRSITSHYGDHYLPEKPRIYSS 341
LY + G I+Y RTD L + + S ++ + R +
Sbjct: 303 LY--------MNGYISYPRTDNTIYPKSLDLNGVLATLAKGAFSKDVA-WVKDNRRPVPT 353
Query: 342 KSKNAQEAHEAIRPNDFDFLPSKMKQFLDSDQFQLYNLIWKRSVASQMASAKFERTTVNI 401
+ K + H I P ++ L D+++LY L+ +R +A+ A++ VN
Sbjct: 354 RGKKSSTDHPPIHPTG-----VATREELGDDRWKLYELVVRRFLATLSPDAEWATMKVNF 408
Query: 402 IATYNDQIGHLRTTGSLLCFDGFLKVWENQYDQEKNSEEDILLPYISANEQLIATETNAS 461
A TG L G W Y + E +LP + E+L N
Sbjct: 409 DAGGEPYT----ATGGRLLEAG----WRTVYPYSEAKEN--ILPAFALGEKLPILAVNLE 458
Query: 462 QHFTEPPPRYSESSLIKKMEEIGIGRPSTYATILETLYKRKYVIAEKRKILPQNTGRIVT 521
+ T+PP RYS+S LI++MEE+G+G ST ++ L RKY+ E + P GR VT
Sbjct: 459 EKETQPPARYSQSRLIQRMEELGLGTKSTRHEVIGKLVSRKYI--EGNPLRPTLVGRAVT 516
Query: 522 AFLENFFSQYVEYDFTADLEEKLDEISTGKLNWKEVLHEFWEEFIEKIDSIKKLRISNVL 581
LE E D T LEE + +I K +V+ E + D ++
Sbjct: 517 ESLEEHAGTITEPDMTQTLEEHMQQIKERKRTRDDVVTESRKMLHRAFDELEANEAVIGR 576
Query: 582 DILNDTLSSVIFPPKENNEDSRTCPEC-HTHSLSLKLSSKYGAFVGCTNYPECKY 635
DI+ T + P CP C + SS+ F+GC+ YP+C +
Sbjct: 577 DIMERTAEELTIGP---------CPVCGKDLRIKHIGSSQ---FIGCSGYPDCTF 619