RPSBLAST alignment for GI: 254780306 and conserved domain: PRK14973

>gnl|CDD|184936 PRK14973, PRK14973, DNA topoisomerase I; Provisional. Length = 936
 Score =  214 bits (546), Expect = 9e-56
 Identities = 170/595 (28%), Positives = 265/595 (44%), Gaps = 74/595 (12%)

Query: 58  SQKHLQNIIHAV-KSSTILILATDPDREGEAISWHVLDVLRQKNLIEKTKIQRVSFNAIT 116
           ++K +  +I  + K +  + +ATD D EGE I     +++R  N   K  I R  F+AIT
Sbjct: 82  TEKKIVGLIQKLAKKADRVTIATDFDTEGELIGKEAYELVRAVN--PKVPIDRARFSAIT 139

Query: 117 KQVVLNAMKSPRDINLDLVNAYLARRALDYLVGFNLSPILWQKLPGAR------SAGRVQ 170
           K+ ++ A   P D++  L  A  AR+ +D + G +L+  +   L   R      S GRVQ
Sbjct: 140 KEEIVTAFAEPTDLDFALAAAGEARQIIDLIWGASLTRFI--SLAAHRGGDNILSVGRVQ 197

Query: 171 SVALRLICNRENQIESFVSEEYWSLSVLLETPRNDKFTAHLTDFNGQRIEKKSI----SN 226
           S  L +I +RE +IE+FV E+YW LS+              T+ +G+ IE +      ++
Sbjct: 198 SPTLAMIVDREKEIEAFVPEKYWMLSLA-------------TEKDGEGIEARHTHGRFTD 244

Query: 227 KKEADDLISFVKKATYSVEKIENKPIKRNPWPAFTTSTLQQVASSRLGFSASHTMRIAQK 286
              A+      K+     E  E   + R P P  TT+ +  VA+SRLGFSA++ MRIA+ 
Sbjct: 245 SAAAEAAYDATKEPLVVTEVKEGHKVDRAPTPFDTTTFI--VAASRLGFSAANAMRIAED 302

Query: 287 LYEGIDVNGEIVGLITYMRTDGVHMSP-----DALEAVRRSITSHYGDHYLPEKPRIYSS 341
           LY        + G I+Y RTD             L  + +   S     ++ +  R   +
Sbjct: 303 LY--------MNGYISYPRTDNTIYPKSLDLNGVLATLAKGAFSKDVA-WVKDNRRPVPT 353

Query: 342 KSKNAQEAHEAIRPNDFDFLPSKMKQFLDSDQFQLYNLIWKRSVASQMASAKFERTTVNI 401
           + K +   H  I P          ++ L  D+++LY L+ +R +A+    A++    VN 
Sbjct: 354 RGKKSSTDHPPIHPTG-----VATREELGDDRWKLYELVVRRFLATLSPDAEWATMKVNF 408

Query: 402 IATYNDQIGHLRTTGSLLCFDGFLKVWENQYDQEKNSEEDILLPYISANEQLIATETNAS 461
            A           TG  L   G    W   Y   +  E   +LP  +  E+L     N  
Sbjct: 409 DAGGEPYT----ATGGRLLEAG----WRTVYPYSEAKEN--ILPAFALGEKLPILAVNLE 458

Query: 462 QHFTEPPPRYSESSLIKKMEEIGIGRPSTYATILETLYKRKYVIAEKRKILPQNTGRIVT 521
           +  T+PP RYS+S LI++MEE+G+G  ST   ++  L  RKY+  E   + P   GR VT
Sbjct: 459 EKETQPPARYSQSRLIQRMEELGLGTKSTRHEVIGKLVSRKYI--EGNPLRPTLVGRAVT 516

Query: 522 AFLENFFSQYVEYDFTADLEEKLDEISTGKLNWKEVLHEFWEEFIEKIDSIKKLRISNVL 581
             LE       E D T  LEE + +I   K    +V+ E  +      D ++        
Sbjct: 517 ESLEEHAGTITEPDMTQTLEEHMQQIKERKRTRDDVVTESRKMLHRAFDELEANEAVIGR 576

Query: 582 DILNDTLSSVIFPPKENNEDSRTCPEC-HTHSLSLKLSSKYGAFVGCTNYPECKY 635
           DI+  T   +   P         CP C     +    SS+   F+GC+ YP+C +
Sbjct: 577 DIMERTAEELTIGP---------CPVCGKDLRIKHIGSSQ---FIGCSGYPDCTF 619