HHsearch alignment for GI: 254780307 and conserved domain: KOG4039
>KOG4039 consensus.
Probab=98.07 E-value=4e-05 Score=50.35 Aligned_cols=71 Identities=23% Similarity=0.267 Sum_probs=43.0
Q ss_pred CC-EEEEEECCCCHHHHHHHHHHHHCCCCEEE-EEEEECCCCCCEEEECCCCEEEEEECC-----H--HHHCCCCEEEEC
Q ss_conf 96-17999816677899999999744998078-999974765875600278158998779-----4--363188478606
Q gi|254780307|r 1 MT-FKVAVVGATGNVGREMLNIICERGFPISE-VVALASERSAGTKVPFGKETIDVQDVK-----S--YDFSDTDICLMS 71 (335)
Q Consensus 1 M~-~kvaIiGatG~vG~el~~lL~~~~~p~~~-l~~~~s~~~~G~~i~~~~~~~~~~~~~-----~--~~~~~~Divf~a 71 (335)
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~--~~FSKV~~i~RR~~---~d~at~k~v~q~~vDf~Kl~~~a~~~qg~dV~Fca 90 (238)
T KOG4039 16 MQNMSGFVLGATGLCGGGLLKHAQEA--PQFSKVYAILRREL---PDPATDKVVAQVEVDFSKLSQLATNEQGPDVLFCA 90 (238)
T ss_pred HHCCCEEEEECCCCCCHHHHHHHHHC--CCCEEEEEEEECCC---CCCCCCCEEEEEEECHHHHHHHHHHHCCCCEEEEE
T ss_conf 33022478853553138999998856--56206999973157---98421364546783268888877650288568996
Q ss_pred CCHHH
Q ss_conf 87589
Q gi|254780307|r 72 AGHAV 76 (335)
Q Consensus 72 ~p~~~ 76 (335)
T Consensus 91 LgTTR 95 (238)
T KOG4039 91 LGTTR 95 (238)
T ss_pred ECCCC
T ss_conf 11355