HHsearch alignment for GI: 254780307 and conserved domain: PRK01390

>PRK01390 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=92.09  E-value=0.18  Score=28.14  Aligned_cols=84  Identities=23%  Similarity=0.267  Sum_probs=50.8

Q ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECCCCEEEEEECCHHHHCCCCEEEECCCHH----HHHH
Q ss_conf             799981667789999999974499807899997476587560027815899877943631884786068758----9999
Q gi|254780307|r    4 KVAVVGATGNVGREMLNIICERGFPISEVVALASERSAGTKVPFGKETIDVQDVKSYDFSDTDICLMSAGHA----VSSQ   79 (335)
Q Consensus         4 kvaIiGatG~vG~el~~lL~~~~~p~~~l~~~~s~~~~G~~i~~~~~~~~~~~~~~~~~~~~Divf~a~p~~----~s~~   79 (335)
T Consensus        11 ~v~v~Gl-G~sG~s~a~~L~~~G~---~V~~~D~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~iV~SPGIp~~~p~~~~   84 (457)
T PRK01390         11 TVALFGL-GGSGLATARALKAGGA---EVIAWDDNPDS--VAKAAAAGIATADLRTADWSQFAALVLSPGVPLTHPKPHW   84 (457)
T ss_pred             EEEEEEE-CHHHHHHHHHHHHCCC---EEEEEECCCHH--HHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHH
T ss_conf             8999943-6999999999997899---79999399206--6899875983145541232038789999988865667319


Q ss_pred             HHHHHCCCCEEEEE
Q ss_conf             99750456517996
Q gi|254780307|r   80 MSPKIAANGCIVID   93 (335)
Q Consensus        80 ~~~~~~~~g~~VID   93 (335)
T Consensus        85 ~v~~a~~~gi~v~s   98 (457)
T PRK01390         85 TVDLARAAGVEVIG   98 (457)
T ss_pred             HHHHHHHCCCEEEE
T ss_conf             99999985991860