HHsearch alignment for GI: 254780307 and conserved domain: PRK02006

>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=93.06  E-value=0.44  Score=25.82  Aligned_cols=86  Identities=13%  Similarity=0.129  Sum_probs=53.8

Q ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEE--EECCCCE--EEEEECCHHHHCCCCEEEECCCH----H
Q ss_conf             79998166778999999997449980789999747658756--0027815--89987794363188478606875----8
Q gi|254780307|r    4 KVAVVGATGNVGREMLNIICERGFPISEVVALASERSAGTK--VPFGKET--IDVQDVKSYDFSDTDICLMSAGH----A   75 (335)
Q Consensus         4 kvaIiGatG~vG~el~~lL~~~~~p~~~l~~~~s~~~~G~~--i~~~~~~--~~~~~~~~~~~~~~Divf~a~p~----~   75 (335)
T Consensus         9 ~vlV~Gl-G~sG~a~a~~L~~~G~---~V~~~D~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~d~vV~SPGI~p~~p   84 (501)
T PRK02006          9 MVLVLGL-GESGLAMARWCARHGC---RLRVADTREAPPNLAALQAEGIDAEFVGGAFDPALLDGVELVALSPGLSPLEP   84 (501)
T ss_pred             EEEEEEE-CHHHHHHHHHHHHCCC---EEEEEECCCCCCCHHHHHHCCCCCEEECCCCCHHHHCCCCEEEECCEECCCCC
T ss_conf             3999833-6889999999997898---49999899998619999860898189778898678468999998990088885


Q ss_pred             HHHHHHHHHCCCCEEEEE
Q ss_conf             999999750456517996
Q gi|254780307|r   76 VSSQMSPKIAANGCIVID   93 (335)
Q Consensus        76 ~s~~~~~~~~~~g~~VID   93 (335)
T Consensus        85 ~~~~~l~~A~~~gi~i~~  102 (501)
T PRK02006         85 ALAALLAAARERGIPVWG  102 (501)
T ss_pred             CHHHHHHHHHHCCCCEEE
T ss_conf             431999999987995876