HHsearch alignment for GI: 254780307 and conserved domain: PRK04690
>PRK04690 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=94.03 E-value=0.17 Score=28.35 Aligned_cols=87 Identities=15% Similarity=0.119 Sum_probs=54.8
Q ss_pred EEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECCC-C-EEEEEECCHHHHCCCCEEEECCCHHHHHHHH
Q ss_conf 7999816677899999999744998078999974765875600278-1-5899877943631884786068758999999
Q gi|254780307|r 4 KVAVVGATGNVGREMLNIICERGFPISEVVALASERSAGTKVPFGK-E-TIDVQDVKSYDFSDTDICLMSAGHAVSSQMS 81 (335)
Q Consensus 4 kvaIiGatG~vG~el~~lL~~~~~p~~~l~~~~s~~~~G~~i~~~~-~-~~~~~~~~~~~~~~~Divf~a~p~~~s~~~~ 81 (335)
T Consensus 10 kv~V~Gl-G~sG~aaa~~L~~~g~-~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~vv~SPGi~~~~p~~ 86 (468)
T PRK04690 10 RVALWGW-GREGRAAYRALRAQLP-AQ-PLTVFCNAEEVREVGALADAALLVETEASAQRLAAFEVVVKSPGISPYRPEA 86 (468)
T ss_pred EEEEEEE-CHHHHHHHHHHHHCCC-EE-EEEECCCCCCCHHHHHHCCCCCEEECCCCHHHHHCCCEEEECCCCCCCCHHH
T ss_conf 7999834-7879999999996699-04-9997288324646676204575674677855761488999899579868999
Q ss_pred HHHCCCCEEEEE
Q ss_conf 750456517996
Q gi|254780307|r 82 PKIAANGCIVID 93 (335)
Q Consensus 82 ~~~~~~g~~VID 93 (335)
T Consensus 87 ~~a~~~~i~i~~ 98 (468)
T PRK04690 87 LAAAAQGTPFIG 98 (468)
T ss_pred HHHHHCCCCEEE
T ss_conf 999987994886