HHsearch alignment for GI: 254780307 and conserved domain: TIGR01546
>TIGR01546 GAPDH-II_archae glyceraldehyde-3-phosphate dehydrogenase, type II; InterPro: IPR006436 This family describes the type II glyceraldehyde-3-phosphate dehydrogenases which are limited to archaea. These enzymes catalyze the interconversion of 1,3-diphosphoglycerate and glyceraldehyde-3-phosphate, a central step in glycolysis and gluconeogenesis. In archaea, either NAD or NADP may be utilised as the cofactor.; GO: 0008943 glyceraldehyde-3-phosphate dehydrogenase activity, 0050661 NADP binding, 0051287 NAD binding, 0006096 glycolysis, 0005737 cytoplasm.
Probab=97.33 E-value=0.0015 Score=40.75 Aligned_cols=222 Identities=17% Similarity=0.304 Sum_probs=137.0
Q ss_pred EEEECCCCHHHHHHHHHHHHCCCCEEEEEEEE--CCCC-------CCEEEE---------CCCCEEEEEECCHHHHCCCC
Q ss_conf 99981667789999999974499807899997--4765-------875600---------27815899877943631884
Q gi|254780307|r 5 VAVVGATGNVGREMLNIICERGFPISEVVALA--SERS-------AGTKVP---------FGKETIDVQDVKSYDFSDTD 66 (335)
Q Consensus 5 vaIiGatG~vG~el~~lL~~~~~p~~~l~~~~--s~~~-------~G~~i~---------~~~~~~~~~~~~~~~~~~~D 66 (335)
T Consensus 1 VgiNGY-GTIGKRVAdAv~kQ--dDMklvGVtKtsPdfEA~~A~e~Gi~~Y~~~~e~~~~FEeaGi~V~GT~edL~ek~D 77 (335)
T TIGR01546 1 VGINGY-GTIGKRVADAVIKQ--DDMKLVGVTKTSPDFEAFIAKEKGIDIYVAAEEFLKKFEEAGIKVAGTVEDLLEKVD 77 (335)
T ss_pred CCCCCC-CCCCHHHHHHHCCC--CCCEEEEECCCCCCHHHHHHHHCCCEEEECCHHHHHHHHHCCCEEECCHHHHHHHCC
T ss_conf 923453-56222444441369--982377411689838888887679326426704431254368704425787310428
Q ss_pred EEEECCCHHHHHHHHH-HHCCCCE----------EEEECCC-CHHCCCCCCCCCCCHHHHHHCCCCCCCEECCCCCCCCC
Q ss_conf 7860687589999997-5045651----------7996145-10011211123641011111033343121267643222
Q gi|254780307|r 67 ICLMSAGHAVSSQMSP-KIAANGC----------IVIDNSS-AWRYDSDVPLIVPEVNPQTISLASRKNIIANPNCSTIQ 134 (335)
Q Consensus 67 ivf~a~p~~~s~~~~~-~~~~~g~----------~VIDlS~-~~R~~~d~p~~lPein~~~i~~~~~~~~VanPgC~at~ 134 (335)
T Consensus 78 IvVD~TP~G~GaknK~G~Yek~g~kAiFQGGEKaeva~~SF~a~~NY-----------~~al----GKdY~RVVSCNTTg 142 (335)
T TIGR01546 78 IVVDATPEGVGAKNKEGIYEKLGLKAIFQGGEKAEVADISFSALANY-----------EEAL----GKDYVRVVSCNTTG 142 (335)
T ss_pred EEEECCCCCCCCCCCCHHHHHHCCEEEEECCCCHHHHHHHHHHHHHH-----------HHHH----CCCEEEEEEECHHH
T ss_conf 88856878744323110366507613643783012442125555106-----------7631----78638998416267
Q ss_pred CCCCCCHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 11122001101787411465215221123211000000000000124554444551013740422553234720000110
Q gi|254780307|r 135 LVVALKPLHDLAMIKRVVVTTYQSVSGAGKKGIDELLAQTKAFLAKKTIENRVFTKNIAFNVIPHIDVFMDGGSTKEEWK 214 (335)
Q Consensus 135 ~~l~L~PL~~~~~i~~v~v~s~~g~SGaG~~~~~eL~~q~~~~~~~~~~~~~~~~~~la~n~iP~i~~~~~~g~~~ee~k 214 (335)
T Consensus 143 L~RTln~ind~~~v~kVrAv~vR--RaADp~~vK--kGP----IN------aivP~P---~TvP-------SHHgp---- 194 (335)
T TIGR01546 143 LVRTLNAINDLSKVEKVRAVMVR--RAADPKEVK--KGP----IN------AIVPDP---ATVP-------SHHGP---- 194 (335)
T ss_pred HHHHHHHHHHHCCCCEEEEEEEE--CCCCHHHCC--CCC----CC------CCCCCC---CCCC-------CCCCC----
T ss_conf 88766433233061058999985--378933426--187----36------537831---7879-------88776----
Q ss_pred EEEEEEEEECCCCCCCCCCEEEEEEECCEEEEEEEECCCCCHHHHHHHHHHCCCCEEECCCC
Q ss_conf 11210001023432211200112110215798767246587899987310069838810268
Q gi|254780307|r 215 VLVETQKILDPNIKVSCTAARVPVFIGHAESVNIEFEKDISIKDAVAAINKSKGCIVVDKPD 276 (335)
Q Consensus 215 ~~~E~~kil~~~~~v~~t~~~vPv~rG~~~ti~i~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 276 (335)
T Consensus 195 ---DV~tVi-~~lnI~TmA~~vPTTlMH~H~i~veLk~~v~~~Di~d~lenTpRvlL~~~k~ 252 (335)
T TIGR01546 195 ---DVQTVI-RDLNIATMALIVPTTLMHVHSIMVELKDKVEKEDILDVLENTPRVLLLESKK 252 (335)
T ss_pred ---CHHHHH-CCCCCCEEEEECCCHHCCCCEEEEEECCCCCHHHHHHHHCCCCEEEEEECCC
T ss_conf ---424341-2358001234314012141014677357656456876532886089873157