HHsearch alignment for GI: 254780307 and conserved domain: cd01483
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=94.46 E-value=0.29 Score=26.96 Aligned_cols=92 Identities=14% Similarity=0.194 Sum_probs=56.7
Q ss_pred EEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEEC----CCCCCEEEEC-------------------CCCEEEEE----E
Q ss_conf 7999816677899999999744998078999974----7658756002-------------------78158998----7
Q gi|254780307|r 4 KVAVVGATGNVGREMLNIICERGFPISEVVALAS----ERSAGTKVPF-------------------GKETIDVQ----D 56 (335)
Q Consensus 4 kvaIiGatG~vG~el~~lL~~~~~p~~~l~~~~s----~~~~G~~i~~-------------------~~~~~~~~----~ 56 (335)
T Consensus 1 kVlivG~-GglG~~va~~L~~~Gv--~~i~ivD~D~v~~~Nl~Rq~~~~~~dvG~~Ka~~a~~~l~~~np~v~i~~~~~~ 77 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGV--GKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEG 77 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHHCC--CCEEEEECCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCEEEEEECC
T ss_conf 9999997-9899999999999379--719999789875001464225898894922489999999856898389999456
Q ss_pred CCH----HHHCCCCEEEECCCHHHHHHHHHHH-CCCCEEEEECCCCH
Q ss_conf 794----3631884786068758999999750-45651799614510
Q gi|254780307|r 57 VKS----YDFSDTDICLMSAGHAVSSQMSPKI-AANGCIVIDNSSAW 98 (335)
Q Consensus 57 ~~~----~~~~~~Divf~a~p~~~s~~~~~~~-~~~g~~VIDlS~~~ 98 (335)
T Consensus 78 ~~~~~~~~~~~~~dvvi~~~D~~~~r~~l~~~~~~~~ip~i~~~~~g 124 (143)
T cd01483 78 ISEDNLDDFLDGVDLVIDAIDNIAVRRALNRACKELGIPVIDAGGLG 124 (143)
T ss_pred CCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 89646999975999999877999999999999998699889963667