HHsearch alignment for GI: 254780307 and conserved domain: cd05290
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=93.80 E-value=0.17 Score=28.37 Aligned_cols=68 Identities=31% Similarity=0.517 Sum_probs=43.1
Q ss_pred EEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECCC--CCCEEEECC-------CCEEEEEECCHHHHCCCCEEEECCC
Q ss_conf 799981667789999999974499807899997476--587560027-------8158998779436318847860687
Q gi|254780307|r 4 KVAVVGATGNVGREMLNIICERGFPISEVVALASER--SAGTKVPFG-------KETIDVQDVKSYDFSDTDICLMSAG 73 (335)
Q Consensus 4 kvaIiGatG~vG~el~~lL~~~~~p~~~l~~~~s~~--~~G~~i~~~-------~~~~~~~~~~~~~~~~~Divf~a~p 73 (335)
T Consensus 1 KI~IIGa-G~VG~~~A~~l~~~~-~~~elvL~Di~~~~a~g~a~Dl~h~~~~~~~~~~~~~~~~y~~~~~aDiVVitaG 77 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALG-LFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGDYDDCADADIIVITAG 77 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHHCC-CCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEECCCCHHHHCCCCEEEECCC
T ss_conf 9899996-989999999998569-9887999928898237999987612035899865866799899469999998677