HHsearch alignment for GI: 254780307 and conserved domain: cd05294
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=97.14 E-value=0.0031 Score=38.90 Aligned_cols=70 Identities=20% Similarity=0.418 Sum_probs=45.3
Q ss_pred EEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECCC----CCCEEEE------CCCCEEEEEEC-CHHHHCCCCEEEEC
Q ss_conf 1799981667789999999974499807899997476----5875600------27815899877-94363188478606
Q gi|254780307|r 3 FKVAVVGATGNVGREMLNIICERGFPISEVVALASER----SAGTKVP------FGKETIDVQDV-KSYDFSDTDICLMS 71 (335)
Q Consensus 3 ~kvaIiGatG~vG~el~~lL~~~~~p~~~l~~~~s~~----~~G~~i~------~~~~~~~~~~~-~~~~~~~~Divf~a 71 (335)
T Consensus 1 mKV~IiGAaG~VG~~~a~~l~~~~-~~~el~LiD~~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~d~~~~~daDivVit 79 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKED-VVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDLSDVAGSDIVIIT 79 (309)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CCCEEEEEECCCCCCCCCEEEHHHHCCCCCCCCCCEEEECCCHHHHCCCCEEEEC
T ss_conf 989999999769999999998379-9875999605564342311235545034336887679827988996899999987
Q ss_pred CC
Q ss_conf 87
Q gi|254780307|r 72 AG 73 (335)
Q Consensus 72 ~p 73 (335)
T Consensus 80 AG 81 (309)
T cd05294 80 AG 81 (309)
T ss_pred CC
T ss_conf 89