HHsearch alignment for GI: 254780307 and conserved domain: pfam01113

>pfam01113 DapB_N Dihydrodipicolinate reductase, N-terminus. Dihydrodipicolinate reductase (DapB) reduces the alpha,beta-unsaturated cyclic imine, dihydro-dipicolinate. This reaction is the second committed step in the biosynthesis of L-lysine and its precursor meso-diaminopimelate, which are critical for both protein and cell wall biosynthesis. The N-terminal domain of DapB binds the dinucleotide NADPH.
Probab=97.69  E-value=0.00036  Score=44.56  Aligned_cols=92  Identities=26%  Similarity=0.315  Sum_probs=61.8

Q ss_pred             EEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECCCC---CCEEEEC--CCCEEEEEECCHHHHCCCCEEEECCCHHHH
Q ss_conf             17999816677899999999744998078999974765---8756002--781589987794363188478606875899
Q gi|254780307|r    3 FKVAVVGATGNVGREMLNIICERGFPISEVVALASERS---AGTKVPF--GKETIDVQDVKSYDFSDTDICLMSAGHAVS   77 (335)
Q Consensus         3 ~kvaIiGatG~vG~el~~lL~~~~~p~~~l~~~~s~~~---~G~~i~~--~~~~~~~~~~~~~~~~~~Divf~a~p~~~s   77 (335)
T Consensus         1 ikV~i~Ga~GrMG~~i~~~i~~~--~~~~lv~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~DVvIDFS~p~~~   78 (122)
T pfam01113         1 IKVAVVGASGRMGRELIKAILEA--PDFELVAAVDRPGSSLLGSDAGELAGPLGVPVTDDLEEVLADADVLIDFTTPEAT   78 (122)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHC--CCCEEEEEEECCCCCCCCCCCCCCCCCCCCEECCCHHHHCCCCCEEEEECCHHHH
T ss_conf             98999889887899999999858--9968999994389612254310014678711124477751578889990687899


Q ss_pred             HHHHHHHCCCCEEEEECCC
Q ss_conf             9999750456517996145
Q gi|254780307|r   78 SQMSPKIAANGCIVIDNSS   96 (335)
Q Consensus        78 ~~~~~~~~~~g~~VIDlS~   96 (335)
T Consensus        79 ~~~~~~~~~~~~~~ViGTT   97 (122)
T pfam01113        79 LENLELALKHGKPLVIGTT   97 (122)
T ss_pred             HHHHHHHHHCCCCEEEECC
T ss_conf             9999999967998899899