HHsearch alignment for GI: 254780307 and conserved domain: pfam02774
>pfam02774 Semialdhyde_dhC Semialdehyde dehydrogenase, dimerization domain. This Pfam entry contains the following members: N-acetyl-glutamine semialdehyde dehydrogenase (AgrC) Aspartate-semialdehyde dehydrogenase
Probab=100.00 E-value=1.3e-36 Score=241.27 Aligned_cols=162 Identities=46% Similarity=0.679 Sum_probs=140.7
Q ss_pred CCHHHHC-CCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCHHHHE
Q ss_conf 2001101-78741146521522112321100000000000012455444455101374042255323472--00001101
Q gi|254780307|r 139 LKPLHDL-AMIKRVVVTTYQSVSGAGKKGIDELLAQTKAFLAKKTIENRVFTKNIAFNVIPHIDVFMDGG--STKEEWKV 215 (335)
Q Consensus 139 L~PL~~~-~~i~~v~v~s~~g~SGaG~~~~~eL~~q~~~~~~~~~~~~~~~~~~la~n~iP~i~~~~~~g--~~~ee~k~ 215 (335)
T Consensus 1 L~PL~~~~~~i~~Iiv~t~qgvSGAG~~~-----------------~~~~~~~~i~~N~~py~~~~~h~h~~Ei~eel~~ 63 (167)
T pfam02774 1 LKPLRDALGGLERVIVDTYQAVSGAGKKA-----------------KPGVFGAPIADNLIPYIDGEEHNGTPETREELKM 63 (167)
T ss_pred CCCHHHHHCCCCEEEEEECCCCCCCCCCC-----------------CCCCCCHHHHCCEEEECCCHHHCCCHHHHHHHHH
T ss_conf 92044644899799999211025067887-----------------8678653432888942574030483068888777
Q ss_pred EEEEEEEECCCCCCCCCCEEEEEEECCEEEEEEEEC-CCCCHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHCC-CCCEE
Q ss_conf 121000102343221120011211021579876724-6587899987310069838810268899976154348-97326
Q gi|254780307|r 216 LVETQKILDPNIKVSCTAARVPVFIGHAESVNIEFE-KDISIKDAVAAINKSKGCIVVDKPDKNEYITPVESIR-RDLVF 293 (335)
Q Consensus 216 ~~E~~kil~~~~~v~~t~~~vPv~rG~~~ti~i~l~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~v~ 293 (335)
T Consensus 64 ~~e~~~~l~~~~~v~~T~~rVPv~rGh~~ti~v~~~~~~~~~~~~~~~~~~~~~~~v~v~~-~~~~P~~~~v~g~tn~v~ 142 (167)
T pfam02774 64 VNETKKILGFTPKVSATCVRVPVFRGHSETVTVKLKLKPIDVEEVYEAFYAAPGVFVVVRP-EEDYPTPRAVRGGTNFVY 142 (167)
T ss_pred HCCCCEEECCCCCCCCEEEECCEEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEECC-CCCCCCCHHHHCCCCCEE
T ss_conf 4178367438986332589814084689999999548816599999999738998899899-878874499917988589
Q ss_pred EEEEEECCCCCCEEEEEEEECCHHH
Q ss_conf 7527763668886999997013022
Q gi|254780307|r 294 VSRIRKDPTLKSGLNLWIVANNLRK 318 (335)
Q Consensus 294 Vgrvr~~~~~~~~~~~~~~~DNL~k 318 (335)
T Consensus 143 VGrir~d~~~~~~l~~~sviDNL~K 167 (167)
T pfam02774 143 VGRVRKDPDGDRGLKLVSVIDNLRK 167 (167)
T ss_pred EEEEEECCCCCCEEEEEEEECCCCC
T ss_conf 9998886899899999999725529