HHsearch alignment for GI: 254780308 and conserved domain: COG2951
>COG2951 MltB Membrane-bound lytic murein transglycosylase B [Cell envelope biogenesis, outer membrane].
Probab=100.00 E-value=0 Score=582.41 Aligned_cols=243 Identities=35% Similarity=0.556 Sum_probs=234.0
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 20899999999999983999899999860877770233320256666777989998764001357999998532346999
Q gi|254780308|r 40 DRFGEWKSAARARAVREGMSPKTAKHLFADLEYLDTTIARDRKMVTSPPVSFKDYLDGLSSSEIIAQGIALKKANSRLLI 119 (288)
Q Consensus 40 ~~F~~wl~~l~~~A~~~Gis~~tl~~~f~~~~~~~~VI~~dr~Qp~ef~~t~~~Y~~~~vs~~Ri~~Gr~~~~~~~~~L~ 119 (288)
T Consensus 39 ~~f~~~~~~~~~~a~~~Gi~~~~~~~a~~~v~~~~~vi~~~r~q~-~f~~~~~~~~~~~i~~~rv~~G~~~~~~~~~~l~ 117 (343)
T COG2951 39 FAFNAWLQGFAPEAAAAGISAAVLDAAFAGVSYDPRVIARDRPQP-EFRQPVAEFSARRISEARVQQGRGFPAQYAAALA 117 (343)
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHCCCCCC-CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf 007999998899999809987677775178997344652568999-6657499998750336567778999999999999
Q ss_pred HHHHHHCCCHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHCCCCCHH-CCCCCCCCCC
Q ss_conf 99998389988944523100221010256418999987532-753156654789999998643877700-0367523578
Q gi|254780308|r 120 NLKKEYGVPPGILMALWGLETHFGETMGKTPLLSTLATLAY-DCRRAKFFTEQFFYALDLVKKGVISSH-ALGATFGEIG 197 (288)
Q Consensus 120 ~ie~~yGV~~~ii~AiwGiET~yG~~~G~~~vl~aLaTLA~-d~RR~~ff~~el~a~l~~~~~g~~~~~-~~GS~aGa~G 197 (288)
T Consensus 118 ~~e~~yGVp~~ii~aiWg~Et~fG~~~g~~~v~~ALaTLa~~~~rR~~~f~~eL~aaL~ii~~gdv~~~~~~GSwAGAmG 197 (343)
T COG2951 118 RAERRYGVPAPILVAIWGMETGFGRVMGKFRVLDALATLAFADPRRAGFFRDELIAALKIIQDGDVDPLALKGSWAGAMG 197 (343)
T ss_pred HHHHHHCCCCHHEEEEEHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCC
T ss_conf 99998389800325632221120310376506888775314554210111778999999876169873113411643147
Q ss_pred CCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC----------------------------
Q ss_conf 6665522444215367899987887898889999999999729888589764----------------------------
Q gi|254780308|r 198 QFQFLPVNVVKYAIDADEDGKIDLVKSNIDAIASAAKFLAKLGWTKCAGYQP---------------------------- 249 (288)
Q Consensus 198 ~~QFmPs~~~~yavD~dgdG~~dl~~~~~Da~aS~AnyL~~~GW~~g~~~~~---------------------------- 249 (288)
T Consensus 198 q~QFmPss~~~YaVD~DGDG~~Diw~s~~DAlaS~ANyL~~~GW~~g~pwg~ev~lp~~~~~~~~~~~k~~~~Wa~~gv~ 277 (343)
T COG2951 198 QTQFMPSSYLKYAVDGDGDGHRDIWNSVPDALASAANYLKSHGWDRGRPWGVEVALPAYNNSSLAGYAKTVADWAALGVT 277 (343)
T ss_pred CCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCCCHHHHHHHHCC
T ss_conf 76657188998610578987207766807699999999997599879953467633788613330256667899874001
Q ss_pred ------------------------------CCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCC
Q ss_conf ------------------------------5345899998526289999999999996899888
Q gi|254780308|r 250 ------------------------------GEKNFAILKHWNASLNYNKTIAYIAAHIDGVPIG 283 (288)
Q Consensus 250 ------------------------------~~~n~~~~~~~n~s~~y~~~v~~~a~~~~g~p~~ 283 (288)
T Consensus 278 ~~~g~p~~~~~~~~~a~ll~p~g~~G~~fl~~~Nf~~i~~yN~S~~Ya~ai~~la~~iag~~~~ 341 (343)
T COG2951 278 RAGGKPLPALGDTGKASLLLPAGRKGPAFLGLPNFYVILRYNRSDVYALAIGLLADRIAGAPGP 341 (343)
T ss_pred CCCCCCCCCCCCCCCCCEECCCCCCCCCEEECCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 3578889985545644222136888863221430799985050878999999999997458889