HHsearch alignment for GI: 254780308 and conserved domain: PRK11619
>PRK11619 lytic murein transglycosylase; Provisional.
Probab=97.95 E-value=3.8e-05 Score=51.78 Aligned_cols=49 Identities=14% Similarity=0.169 Sum_probs=35.2
Q ss_pred CCCCCCCCCCCCCHHHHHHCCCCCCCC---CCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 675235786665522444215367899---98788789888999999999972
Q gi|254780308|r 190 GATFGEIGQFQFLPVNVVKYAIDADED---GKIDLVKSNIDAIASAAKFLAKL 239 (288)
Q Consensus 190 GS~aGa~G~~QFmPs~~~~yavD~dgd---G~~dl~~~~~Da~aS~AnyL~~~ 239 (288)
T Consensus 513 ~S~~gA~GlmQ~mP~Ta~~~a~~~~~~~~~~~~~l~-~~~~ni~~G~~yl~~l 564 (645)
T PRK11619 513 KSPVGASGLMQIMPGTATHTVKMFSIPGYSSPSQLL-DPETNINIGTSYLQYV 564 (645)
T ss_pred CCCCCCCCCHHHCHHHHHHHHHHCCCCCCCCHHHCC-CHHHHHHHHHHHHHHH
T ss_conf 767787313631779999999983997778866606-9999999999999999