Query gi|254780309|ref|YP_003064722.1| comF family protein [Candidatus Liberibacter asiaticus str. psy62] Match_columns 59 No_of_seqs 104 out of 2972 Neff 6.1 Searched_HMMs 33803 Date Wed Jun 1 12:06:57 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780309.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 >2ji4_A Phosphoribosyl pyropho 99.3 7E-12 2.1E-16 85.3 7.0 52 7-58 87-138 (176) 2 >1vch_A Phosphoribosyltransfer 99.3 1.6E-11 4.6E-16 83.4 7.3 54 5-58 108-161 (175) 3 >1ao0_A Glutamine phosphoribos 99.1 6.4E-11 1.9E-15 80.1 5.2 48 11-58 91-138 (218) 4 >1tc1_A Protein (hypoxanthine 99.1 1.3E-10 3.9E-15 78.4 6.8 49 9-57 81-129 (146) 5 >2jbh_A HHGP; glycosyltransfer 99.1 3.2E-10 9.3E-15 76.3 7.6 50 7-56 124-173 (225) 6 >1pzm_A HGPRT, hypoxanthine-gu 99.1 2.3E-10 6.8E-15 77.1 6.6 48 10-57 81-128 (146) 7 >1w30_A PYRR bifunctional prot 99.1 2E-10 6E-15 77.4 6.1 48 11-58 106-153 (201) 8 >1hgx_A HGXPRTASE, hypoxanthin 99.1 3.9E-10 1.2E-14 75.8 7.0 51 8-58 69-119 (138) 9 >3hvu_A Hypoxanthine phosphori 99.1 4.6E-10 1.4E-14 75.4 7.2 51 6-56 68-118 (137) 10 >2geb_A Hypoxanthine-guanine p 99.0 5E-10 1.5E-14 75.3 6.7 50 7-56 69-118 (137) 11 >1g2q_A Adenine phosphoribosyl 99.0 7.7E-10 2.3E-14 74.2 7.7 47 10-56 115-161 (187) 12 >1zn8_A APRT, adenine phosphor 99.0 7.4E-10 2.2E-14 74.3 7.0 49 9-57 112-160 (180) 13 >1ecf_A Glutamine phosphoribos 99.0 3.5E-10 1E-14 76.1 5.0 46 12-57 97-142 (202) 14 >1a3c_A PYRR, pyrimidine opero 99.0 7.5E-10 2.2E-14 74.3 6.5 54 4-57 85-138 (181) 15 >1i5e_A Uracil phosphoribosylt 99.0 4.3E-10 1.3E-14 75.6 5.1 51 6-56 52-102 (148) 16 >1yfz_A Hypoxanthine-guanine p 99.0 9.6E-10 2.9E-14 73.7 6.7 50 8-57 71-120 (138) 17 >1z7g_A HGPRT, HGPRTASE, hypox 99.0 9.4E-10 2.8E-14 73.8 6.4 48 9-56 118-165 (217) 18 >1j7j_A HPRT, hypoxanthine pho 99.0 8E-10 2.4E-14 74.2 5.9 47 10-56 74-120 (139) 19 >1y0b_A Xanthine phosphoribosy 99.0 1.5E-09 4.5E-14 72.6 7.2 47 10-56 113-159 (197) 20 >1vdm_A Purine phosphoribosylt 99.0 1.2E-09 3.7E-14 73.1 6.6 48 9-56 75-122 (153) 21 >1cjb_A Protein (hypoxanthine- 99.0 1.5E-09 4.4E-14 72.7 6.8 49 9-57 129-177 (231) 22 >1o57_A PUR operon repressor; 98.9 1.6E-09 4.6E-14 72.6 6.2 47 10-56 113-159 (215) 23 >1wd5_A Hypothetical protein T 98.9 1.7E-09 5E-14 72.4 5.9 46 10-55 113-158 (208) 24 >2dy0_A APRT, adenine phosphor 98.9 3.8E-09 1.1E-13 70.5 7.2 47 10-56 119-165 (190) 25 >1l1q_A Adenine phosphoribosyl 98.9 1.2E-09 3.4E-14 73.3 4.4 44 12-55 112-155 (186) 26 >1qb7_A APRT, adenine phosphor 98.9 2.6E-09 7.7E-14 71.4 6.0 45 12-56 133-177 (215) 27 >1fsg_A HGPRTASE, hypoxanthine 98.9 5.5E-09 1.6E-13 69.6 7.6 48 9-56 134-181 (233) 28 >1ufr_A TT1027, PYR mRNA-bindi 98.9 3.2E-09 9.4E-14 70.9 6.4 45 10-54 79-123 (145) 29 >1lh0_A OMP synthase; loop clo 98.9 2.2E-09 6.6E-14 71.7 5.4 46 11-56 72-117 (145) 30 >2ps1_A Orotate phosphoribosyl 98.9 3.3E-09 9.8E-14 70.8 6.2 45 12-56 97-141 (184) 31 >2ywu_A Hypoxanthine-guanine p 98.9 3.7E-09 1.1E-13 70.6 6.1 47 10-56 88-134 (181) 32 >2wns_A Orotate phosphoribosyl 98.9 3.9E-09 1.1E-13 70.4 5.9 45 13-57 69-113 (133) 33 >2ehj_A Uracil phosphoribosylt 98.9 5E-09 1.5E-13 69.9 6.2 50 8-57 114-163 (208) 34 >2p1z_A Phosphoribosyltransfer 98.9 3.8E-09 1.1E-13 70.5 5.6 47 10-56 107-153 (180) 35 >2yzk_A OPRT, oprtase, orotate 98.8 7.4E-09 2.2E-13 68.9 6.9 48 10-57 75-122 (154) 36 >1o5o_A Uracil phosphoribosylt 98.8 4.6E-09 1.3E-13 70.1 5.0 50 8-57 127-176 (221) 37 >1u9y_A RPPK;, ribose-phosphat 98.8 7.4E-09 2.2E-13 68.9 5.8 45 11-55 57-101 (128) 38 >1v9s_A Uracil phosphoribosylt 98.8 3.8E-09 1.1E-13 70.5 4.3 46 11-56 117-162 (208) 39 >3dez_A OPRT, oprtase, orotate 98.8 9.1E-09 2.7E-13 68.4 5.5 40 12-51 45-84 (84) 40 >2h06_A Ribose-phosphate pyrop 98.8 1E-08 3E-13 68.2 5.2 46 12-57 61-106 (145) 41 >2jky_A Hypoxanthine-guanine p 98.7 2.4E-10 7E-15 77.0 -3.4 46 10-55 86-131 (176) 42 >2aee_A OPRT, oprtase, orotate 98.7 1.9E-08 5.5E-13 66.8 6.2 44 13-56 46-89 (107) 43 >2e55_A Uracil phosphoribosylt 98.7 2.1E-08 6.3E-13 66.5 6.0 46 10-55 114-159 (208) 44 >1xtt_A Probable uracil phosph 98.7 1.7E-08 5.2E-13 66.9 5.2 43 13-55 129-171 (216) 45 >1dqn_A Guanine phosphoribosyl 98.7 2.7E-09 7.9E-14 71.3 0.4 44 10-53 52-95 (116) 46 >1nul_A XPRT, xanthine-guanine 98.7 1.6E-09 4.9E-14 72.5 -0.7 48 12-59 68-115 (123) 47 >3dah_A Ribose-phosphate pyrop 98.7 4.8E-08 1.4E-12 64.6 6.7 47 12-58 59-105 (143) 48 >1bd3_D Uprtase, uracil phosph 98.7 1.5E-08 4.4E-13 67.3 3.4 49 8-56 147-195 (243) 49 >1dku_A Protein (phosphoribosy 98.7 3.1E-08 9.3E-13 65.5 5.1 43 13-55 60-102 (142) 50 >3dmp_A Uracil phosphoribosylt 98.6 1.1E-08 3.4E-13 67.9 2.7 48 9-56 121-168 (217) 51 >3fbt_A Chorismate mutase and 79.6 3.8 0.00011 21.8 4.9 34 15-52 1-34 (117) 52 >2vdc_G Glutamate synthase [NA 73.9 7.7 0.00023 20.2 5.6 36 14-53 45-80 (118) 53 >3don_A Shikimate dehydrogenas 63.0 8.9 0.00026 19.9 3.6 38 11-52 12-49 (151) 54 >1npy_A Hypothetical shikimate 61.1 14 0.00042 18.8 4.4 37 11-51 12-48 (152) 55 >2egg_A AROE, shikimate 5-dehy 59.2 16 0.00046 18.6 5.3 33 15-51 2-34 (125) 56 >1dcf_A ETR1 protein; beta-alp 53.9 19 0.00057 18.1 4.6 34 13-49 3-36 (136) 57 >3dah_A Ribose-phosphate pyrop 53.1 20 0.00059 18.0 5.1 42 11-52 48-93 (176) 58 >2o7s_A DHQ-SDH, bifunctional 49.5 19 0.00056 18.1 3.4 43 4-50 18-60 (190) 59 >3c97_A Signal transduction hi 46.2 26 0.00076 17.4 3.8 35 12-49 5-39 (65) 60 >2j48_A Two-component sensor k 43.4 29 0.00085 17.1 4.6 31 17-50 1-31 (119) 61 >1v7l_A 3-isopropylmalate dehy 42.8 5.9 0.00017 20.8 -0.0 48 8-55 42-89 (163) 62 >3h5i_A Response regulator/sen 42.5 30 0.00087 17.1 4.4 29 15-46 3-31 (140) 63 >2hcu_A 3-isopropylmalate dehy 39.9 14 0.00041 18.8 1.5 42 14-55 82-123 (213) 64 >3gge_A PDZ domain-containing 39.7 33 0.00097 16.8 4.8 42 16-57 49-90 (95) 65 >1nvt_A Shikimate 5'-dehydroge 38.2 33 0.00097 16.8 3.2 38 11-52 12-49 (160) 66 >2ji4_A Phosphoribosyl pyropho 36.1 38 0.0011 16.5 5.1 41 11-51 73-117 (203) 67 >1dku_A Protein (phosphoribosy 34.9 39 0.0012 16.4 5.3 42 11-52 50-95 (175) 68 >3i42_A Response regulator rec 34.8 18 0.00054 18.2 1.5 31 15-48 1-31 (127) 69 >2pkp_A 3-isopropylmalate dehy 32.8 20 0.0006 17.9 1.4 48 8-55 42-89 (170) 70 >2koj_A Partitioning defective 31.9 44 0.0013 16.1 4.9 44 15-58 58-102 (111) 71 >3ca8_A Protein YDCF; two doma 30.1 48 0.0014 15.9 3.2 39 14-52 80-120 (151) 72 >1tmy_A CHEY protein, TMY; che 28.4 51 0.0015 15.8 4.8 31 17-50 2-32 (120) 73 >1u9y_A RPPK;, ribose-phosphat 28.3 52 0.0015 15.8 4.4 42 11-52 41-85 (156) 74 >1s8n_A Putative antiterminato 28.3 52 0.0015 15.8 5.0 36 13-51 9-44 (143) 75 >3eod_A Protein HNR; response 27.8 38 0.0011 16.5 2.1 34 13-49 3-36 (130) 76 >1nh8_A ATP phosphoribosyltran 27.5 26 0.00076 17.4 1.2 20 23-49 66-85 (93) 77 >2h06_A Ribose-phosphate pyrop 26.5 56 0.0016 15.6 4.8 42 11-52 44-89 (181) 78 >1h3d_A ATP-phosphoribosyltran 26.1 28 0.00083 17.2 1.2 13 23-35 67-79 (93) 79 >1ys7_A Transcriptional regula 26.1 57 0.0017 15.5 4.5 33 13-48 3-35 (131) 80 >3kht_A Response regulator; PS 24.9 39 0.0012 16.4 1.7 30 14-46 2-31 (144) 81 >1k68_A Phytochrome response r 24.8 36 0.0011 16.6 1.6 32 16-50 1-33 (140) 82 >2yt7_A Amyloid beta A4 precur 24.8 60 0.0018 15.4 4.4 43 14-56 55-98 (101) 83 >1ve4_A ATP phosphoribosyltran 24.4 42 0.0012 16.2 1.8 22 23-51 60-81 (86) 84 >2ayx_A Sensor kinase protein 23.2 61 0.0018 15.4 2.5 35 12-49 7-41 (137) 85 >1c96_A Mitochondrial aconitas 23.1 20 0.00058 18.0 -0.0 42 14-55 90-131 (219) 86 >1z7m_E ATP phosphoribosyltran 23.0 28 0.00082 17.2 0.7 21 23-50 63-83 (87) 87 >1qys_A TOP7; alpha-beta, nove 22.0 47 0.0014 16.0 1.7 40 17-57 14-57 (106) 88 >1dbw_A Transcriptional regula 21.9 69 0.002 15.1 4.9 31 15-48 1-31 (126) 89 >2q9v_A Membrane-associated gu 21.8 50 0.0015 15.8 1.8 37 16-52 48-84 (90) 90 >2wbn_A G2P, terminase large s 21.3 71 0.0021 15.0 2.6 35 16-50 74-108 (212) 91 >2vd3_A ATP phosphoribosyltran 21.0 72 0.0021 15.0 2.7 32 27-58 45-76 (77) 92 >3g4d_A (+)-delta-cadinene syn 20.9 12 0.00036 19.1 -1.5 19 21-39 18-36 (150) 93 >2jba_A Phosphate regulon tran 20.7 59 0.0018 15.4 2.0 30 17-49 2-31 (127) 94 >2jvf_A De novo protein M7; te 20.5 52 0.0015 15.7 1.7 37 21-57 19-59 (96) 95 >2vd3_A ATP phosphoribosyltran 20.2 57 0.0017 15.5 1.8 13 23-35 68-80 (94) No 1 >>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A* (A:176-351) Probab=99.29 E-value=7e-12 Score=85.26 Aligned_cols=52 Identities=25% Similarity=0.312 Sum_probs=45.8 Q ss_pred ECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECC Q ss_conf 2510210028975999920045738899999999978997899999983068 Q gi|254780309|r 7 VPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLK 58 (59) Q Consensus 7 i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~~ 58 (59) ........++||+|+||||++|||+|+.++++.|+++||++|++++++.... T Consensus 87 ~~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~L~~~Ga~~V~~~~~~~~~~ 138 (176) T 2ji4_A 87 PPITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLS 138 (176) T ss_dssp -CCCEESCCTTSEEEEEEEEECSCHHHHHHHHHHHHTTCCEEEEEEEEECCC T ss_pred CCEEEEEECCCCEEEEECCHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCCC T ss_conf 2203565117978999664110278799999999865998379999798688 No 2 >>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} (A:) Probab=99.26 E-value=1.6e-11 Score=83.40 Aligned_cols=54 Identities=19% Similarity=0.305 Sum_probs=47.0 Q ss_pred EEECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECC Q ss_conf 882510210028975999920045738899999999978997899999983068 Q gi|254780309|r 5 FNVPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLK 58 (59) Q Consensus 5 f~i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~~ 58 (59) ..........++||+|||||||+|||.|+.++++.|+++||+.|++++++.... T Consensus 108 ~~~~~~~~~~~~gk~VliVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~ 161 (175) T 1vch_A 108 LWLDRRFAEKLLNQRVVLVSDVVASGETMRAMEKMVLRAGGHVVARLAVFRQGT 161 (175) T ss_dssp EEECHHHHHHHTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECSC T ss_pred EEEECCHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCEEEEEEEEEEECC T ss_conf 465211112138988999860786795099999999987997999999997378 No 3 >>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} (A:242-459) Probab=99.13 E-value=6.4e-11 Score=80.07 Aligned_cols=48 Identities=27% Similarity=0.430 Sum_probs=43.5 Q ss_pred HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECC Q ss_conf 210028975999920045738899999999978997899999983068 Q gi|254780309|r 11 VSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLK 58 (59) Q Consensus 11 ~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~~ 58 (59) ...+++||+|+||||+++||.|+.++++.|+++||++|++++++...+ T Consensus 91 ~~~~v~gk~vlIVDDii~TG~Tl~~~a~~Lk~~GA~~V~~~~~h~~~~ 138 (218) T 1ao0_A 91 VRGVVEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKISSPPIA 138 (218) T ss_dssp CHHHHTTCEEEEEESCCSSSHHHHHHHHHHHHTTCSEEEEEESSCCCC T ss_pred HHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC T ss_conf 243116860799822220225699999999857998899997889847 No 4 >>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} (A:15-160) Probab=99.12 E-value=1.3e-10 Score=78.36 Aligned_cols=49 Identities=10% Similarity=0.142 Sum_probs=44.0 Q ss_pred CHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEC Q ss_conf 1021002897599992004573889999999997899789999998306 Q gi|254780309|r 9 QYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSL 57 (59) Q Consensus 9 ~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~ 57 (59) ......++||+||||||++|||+|+.++++.|+++|+++|++++++... T Consensus 81 ~~~~~~~~gk~VliVDDvi~TG~T~~~~~~~L~~~G~~~v~~~vl~~~~ 129 (146) T 1tc1_A 81 LDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKR 129 (146) T ss_dssp ECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECT T ss_pred CCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEC T ss_conf 2474224796279982413589999999999970379815899999707 No 5 >>2jbh_A HHGP; glycosyltransferase, PRTFDC1, transferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens} (A:) Probab=99.09 E-value=3.2e-10 Score=76.33 Aligned_cols=50 Identities=20% Similarity=0.262 Sum_probs=44.7 Q ss_pred ECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE Q ss_conf 25102100289759999200457388999999999789978999999830 Q gi|254780309|r 7 VPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59) Q Consensus 7 i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59) .......+++||+|+||||+++||.|+.++++.|++.||++|++++++.- T Consensus 124 ~~~~~~~~v~Gk~ViIVDDiidtG~Tl~~~~~~l~~~Ga~~V~~~~~~~~ 173 (225) T 2jbh_A 124 IGGDDLSTLAGKNVLIVEDVVGTGRTMKALLSNIEKYKPNMIKVASLLVK 173 (225) T ss_dssp ESSSCGGGGTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEE T ss_pred EECCCHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEE T ss_conf 30465566346426875020417899999999997548421038999990 No 6 >>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} (A:31-176) Probab=99.09 E-value=2.3e-10 Score=77.08 Aligned_cols=48 Identities=13% Similarity=0.165 Sum_probs=43.1 Q ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEC Q ss_conf 021002897599992004573889999999997899789999998306 Q gi|254780309|r 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSL 57 (59) Q Consensus 10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~ 57 (59) .....++||+||||||++|||.|+.++.+.|+++|+++|+++++.... T Consensus 81 ~~~~~~~g~~VliVDDvi~TG~T~~~~~~~L~~~G~~~v~~~~l~~~~ 128 (146) T 1pzm_A 81 DVRDSVENRHIMLVEDIVDSAITLQYLMRFMLAKKPASLKTVVLLDKP 128 (146) T ss_dssp CCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECG T ss_pred CCHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEEEEEC T ss_conf 762345317458985024247799999999971099868999999807 No 7 >>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} (A:) Probab=99.08 E-value=2e-10 Score=77.37 Aligned_cols=48 Identities=21% Similarity=0.263 Sum_probs=43.5 Q ss_pred HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECC Q ss_conf 210028975999920045738899999999978997899999983068 Q gi|254780309|r 11 VSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLK 58 (59) Q Consensus 11 ~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~~ 58 (59) ...+++||+||||||+++||+|+.++++.|++.||++|++++++...+ T Consensus 106 ~~~~~~gk~VliVDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~~~~~~ 153 (201) T 1w30_A 106 PAGGIDDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQLAVLVDRG 153 (201) T ss_dssp CTTCSTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC T ss_pred CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCC T ss_conf 565547867999822003470399999999736998779999998289 No 8 >>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} (A:18-155) Probab=99.06 E-value=3.9e-10 Score=75.84 Aligned_cols=51 Identities=16% Similarity=0.245 Sum_probs=45.0 Q ss_pred CCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECC Q ss_conf 510210028975999920045738899999999978997899999983068 Q gi|254780309|r 8 PQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLK 58 (59) Q Consensus 8 ~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~~ 58 (59) .......++||+||||||+++||.|+..+++.|+++|++.|.++++....+ T Consensus 69 ~~~~~~~~~gk~VliVDDvi~tG~Tl~~~~~~l~~~ga~~v~~~~l~~~~~ 119 (138) T 1hgx_A 69 SKDLKTNIEGRHVLVVEDIIDTGLTMYQLLNNLQMRKPASLKVCTLCDKDI 119 (138) T ss_dssp EECCSSCCTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC T ss_pred CCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHCCCCCEEEEEEEEECCC T ss_conf 036874533361799853632107999999998068997999999998576 No 9 >>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxantine-guanine phosphoribosyltransferase, 2-(N- morpholino)ethanesulfonic acid (MES); HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A* (A:38-174) Probab=99.06 E-value=4.6e-10 Score=75.43 Aligned_cols=51 Identities=24% Similarity=0.339 Sum_probs=44.4 Q ss_pred EECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE Q ss_conf 825102100289759999200457388999999999789978999999830 Q gi|254780309|r 6 NVPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59) Q Consensus 6 ~i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59) .........++||+||||||+++||.|+.++.+.|++.|++.+.++++... T Consensus 68 ~~~~~~~~~~~gk~VliVDDii~TG~T~~~~~~~L~~~G~~~v~~~~l~~~ 118 (137) T 3hvu_A 68 KILKDLDTSVEGRDILIVEDIIDSGLTLSYLVDLFKYRKAKSVKIVTLLDK 118 (137) T ss_dssp EEEECCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEEC T ss_pred EEECCCCCCCCCCEEEEEECEECHHHHHHHHHHHHHHCCCCCEEEEEEEEE T ss_conf 781378867699989998132006599999999999619984189999982 No 10 >>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis} (A:20-156) Probab=99.04 E-value=5e-10 Score=75.28 Aligned_cols=50 Identities=16% Similarity=0.236 Sum_probs=43.9 Q ss_pred ECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE Q ss_conf 25102100289759999200457388999999999789978999999830 Q gi|254780309|r 7 VPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59) Q Consensus 7 i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59) ........++||+||||||+++||.|+.++.+.|+++|++.|+++++... T Consensus 69 ~~~~~~~~~~gk~vliVDDii~tG~T~~~~~~~l~~~G~~~v~~~~l~~~ 118 (137) T 2geb_A 69 IIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDK 118 (137) T ss_dssp EEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEEC T ss_pred EECCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC T ss_conf 82467527789989999503022299999999997212456289999871 No 11 >>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} (A:) Probab=99.04 E-value=7.7e-10 Score=74.24 Aligned_cols=47 Identities=19% Similarity=0.229 Sum_probs=42.5 Q ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE Q ss_conf 02100289759999200457388999999999789978999999830 Q gi|254780309|r 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59) Q Consensus 10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59) .....++|++|+||||++|||.|+.++++.|++.||+.|.++++.-. T Consensus 115 ~~~~~~~g~~VliVDDvitTG~Tl~~~~~~L~~~ga~~v~~~vl~~~ 161 (187) T 1g2q_A 115 QKNAIPAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLEYNFVMEL 161 (187) T ss_dssp ETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEC T ss_pred ECCCCCCCCEEEEEEHHHHHCHHHHHHHHHHHHCCCEEEEEEEEEEC T ss_conf 02543578638998535351759999999999879979999999982 No 12 >>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, polymorphism, purine salvage; HET: AMP; 1.76A {Homo sapiens} (A:) Probab=99.02 E-value=7.4e-10 Score=74.34 Aligned_cols=49 Identities=18% Similarity=0.262 Sum_probs=43.6 Q ss_pred CHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEC Q ss_conf 1021002897599992004573889999999997899789999998306 Q gi|254780309|r 9 QYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSL 57 (59) Q Consensus 9 ~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~ 57 (59) ......++||+|+|||||++||.|+.++++.|+++||+.|.++++.-.. T Consensus 112 ~~~~~~~~Gk~VliVDDvi~tG~Tl~~~~~~l~~~Ga~~v~~~~~~~~~ 160 (180) T 1zn8_A 112 IQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELT 160 (180) T ss_dssp EETTSSCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEEEG T ss_pred HCCCCCCCCCEEEEEHHHHHHCHHHHHHHHHHHHCCCEEEEEEEEEECC T ss_conf 0246323686499983775518189999999998799899999999867 No 13 >>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransferase; purine biosynthesis, glycosyltransferase, glutamine amidotransferase; HET: PIN; 2.00A {Escherichia coli} (A:258-459) Probab=99.01 E-value=3.5e-10 Score=76.09 Aligned_cols=46 Identities=22% Similarity=0.311 Sum_probs=42.1 Q ss_pred HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEC Q ss_conf 1002897599992004573889999999997899789999998306 Q gi|254780309|r 12 SKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSL 57 (59) Q Consensus 12 ~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~ 57 (59) ...++||+||||||++|||.|+.++++.|+++||+.|+++++++.. T Consensus 97 ~~~v~gk~vlIVDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~~~~~ 142 (202) T 1ecf_A 97 RAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEI 142 (202) T ss_dssp GGGTTTCCEEEEESCCSSSHHHHHHHHHHHHTTCSSEEEEESSCCC T ss_pred HHHCCCCCEECCCCCEEEECCHHHHHHHHHHCCCCEEEEEECCCCC T ss_conf 4633887134179861022169999999987799789999779973 No 14 >>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding protein, pyrimidine biosynthesis; 1.60A {Bacillus subtilis} (A:) Probab=99.01 E-value=7.5e-10 Score=74.30 Aligned_cols=54 Identities=22% Similarity=0.250 Sum_probs=45.5 Q ss_pred EEEECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEC Q ss_conf 088251021002897599992004573889999999997899789999998306 Q gi|254780309|r 4 AFNVPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSL 57 (59) Q Consensus 4 af~i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~ 57 (59) ...........++||+||||||+++||.|+.++++.|+++|++++..+++.... T Consensus 85 ~~~~~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~L~~~g~~~v~~~~~~~~~ 138 (181) T 1a3c_A 85 PLVKGADIPVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDR 138 (181) T ss_dssp CEEEEEECSSCCTTSEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEEC T ss_pred CEEECCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEECC T ss_conf 478614576213597899994223258479999999974289778999999818 No 15 >>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} (A:1-8,A:70-209) Probab=99.00 E-value=4.3e-10 Score=75.63 Aligned_cols=51 Identities=24% Similarity=0.336 Sum_probs=45.1 Q ss_pred EECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE Q ss_conf 825102100289759999200457388999999999789978999999830 Q gi|254780309|r 6 NVPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59) Q Consensus 6 ~i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59) .+......+++||+|+||||+++||.|+..+++.|+++||++|+++++... T Consensus 52 ~~~~~~~~~v~gk~ViivDDii~TG~Tl~~~~~~L~~~Ga~~I~~~~l~~~ 102 (148) T 1i5e_A 52 EYYVKLPSDVEERDFIIVDPMLATGGSAVAAIDALKKRGAKSIKFMCLIAA 102 (148) T ss_dssp EEEEECCTTTTTSEEEEECSEESSSHHHHHHHHHHHHTTCCCEEEECSEEC T ss_pred EEEEECCCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHCCCCEEEEEEEEEC T ss_conf 899852676666508987366523266999999999679970899998633 No 16 >>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis MB4} (A:39-176) Probab=99.00 E-value=9.6e-10 Score=73.71 Aligned_cols=50 Identities=16% Similarity=0.200 Sum_probs=43.9 Q ss_pred CCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEC Q ss_conf 51021002897599992004573889999999997899789999998306 Q gi|254780309|r 8 PQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSL 57 (59) Q Consensus 8 ~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~ 57 (59) .......+.||+||||||+++||.|+.++++.|++.|++.|+++++.... T Consensus 71 ~~~~~~~~~gk~VlivDDii~TG~Tl~~~~~~l~~~G~~~i~~~~l~~~~ 120 (138) T 1yfz_A 71 IKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKP 120 (138) T ss_dssp EECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECG T ss_pred ECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEC T ss_conf 24676477999799993104455999999999971084015799999847 No 17 >>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} (A:) Probab=98.99 E-value=9.4e-10 Score=73.77 Aligned_cols=48 Identities=15% Similarity=0.245 Sum_probs=43.1 Q ss_pred CHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE Q ss_conf 102100289759999200457388999999999789978999999830 Q gi|254780309|r 9 QYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59) Q Consensus 9 ~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59) ......++||+|+||||+++||.|+.++.+.|+++||++|++++++-- T Consensus 118 ~~~~~~v~Gk~VliVDDii~TG~Tl~~~~~~L~~~GA~~v~~~~~~~~ 165 (217) T 1z7g_A 118 GDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVK 165 (217) T ss_dssp SSCGGGGTTSEEEEEEEECCCHHHHHHHHHHHHTTCCSEEEEEEEEEE T ss_pred CCCHHHHHCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEC T ss_conf 688787741347887224668999999999984767873179999961 No 18 >>1j7j_A HPRT, hypoxanthine phosphoribosyltransferase; glycosyltransferase, nucleotide metabolism, purine salvage; 2.30A {Salmonella typhimurium} (A:12-150) Probab=98.98 E-value=8e-10 Score=74.15 Aligned_cols=47 Identities=17% Similarity=0.294 Sum_probs=42.1 Q ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE Q ss_conf 02100289759999200457388999999999789978999999830 Q gi|254780309|r 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59) Q Consensus 10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59) .....++||+||||||+++||.|+.++.+.|++.|+++|+++++... T Consensus 74 ~~~~~~~gk~VLiVDDvi~TG~T~~~~~~~l~~~g~~~v~~~vl~~~ 120 (139) T 1j7j_A 74 DLDEDIRGKDVLIVEDIIDSGNTLSKVREILGLREPKSLAICTLLDK 120 (139) T ss_dssp CCSSCCBTSEEEEEEEEESSCHHHHHHHHHHHTTCBSEEEEEEEEEC T ss_pred CCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHCCCCEEEEEEEEEE T ss_conf 88756589779999402025789999999986159996999999998 No 19 >>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, structural genomics, PSI, protein structure initative; HET: G4P; 1.80A {Bacillus subtilis} (A:) Probab=98.98 E-value=1.5e-09 Score=72.65 Aligned_cols=47 Identities=23% Similarity=0.231 Sum_probs=42.5 Q ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE Q ss_conf 02100289759999200457388999999999789978999999830 Q gi|254780309|r 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59) Q Consensus 10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59) .....++|++||||||+++||.|+.++.+.|+++||+.|.++++..- T Consensus 113 ~~~~~~~g~~VliVDDii~TG~T~~~~~~~l~~~Ga~~v~~~vl~~~ 159 (197) T 1y0b_A 113 SGTHLSDQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAGIGIVIEK 159 (197) T ss_dssp EGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEE T ss_pred HHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEC T ss_conf 34542479469980787634245999999999889989999999984 No 20 >>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} (A:) Probab=98.97 E-value=1.2e-09 Score=73.13 Aligned_cols=48 Identities=23% Similarity=0.351 Sum_probs=42.4 Q ss_pred CHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE Q ss_conf 102100289759999200457388999999999789978999999830 Q gi|254780309|r 9 QYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59) Q Consensus 9 ~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59) ......++||+||||||+++||.|+.++++.|+++||++++++++... T Consensus 75 ~~~~~~~~gk~vliVDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~l~~~ 122 (153) T 1vdm_A 75 IPIHGDLKDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIACLAMK 122 (153) T ss_dssp ECCCSCCBTCEEEEEEEEESSCHHHHHHHHHHHTTTBSEEEEEEEEEC T ss_pred CCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEEEEC T ss_conf 024323589989999610536874899998777409952789999987 No 21 >>1cjb_A Protein (hypoxanthine-guanine phosphoribosyltransferase); malaria, purine salvage, transition state inhibitor; HET: IRP; 2.00A {Plasmodium falciparum} (A:) Probab=98.97 E-value=1.5e-09 Score=72.68 Aligned_cols=49 Identities=24% Similarity=0.196 Sum_probs=43.4 Q ss_pred CHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEC Q ss_conf 1021002897599992004573889999999997899789999998306 Q gi|254780309|r 9 QYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSL 57 (59) Q Consensus 9 ~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~ 57 (59) .....+++||+|+||||+++||.|+.++++.|++.||++|++++++-.. T Consensus 129 ~~~~~~~~Gk~VlIVDDii~tG~Tl~~~~~~L~~~Ga~~v~~~~~~~~~ 177 (231) T 1cjb_A 129 SEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKR 177 (231) T ss_dssp ESCGGGGBTCEEEEEEEEESSSHHHHHHHHHHGGGCBSEEEEEEEEEEC T ss_pred CCCCHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC T ss_conf 3571342354169983003278999999999987667740188666504 No 22 >>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} (A:77-291) Probab=98.94 E-value=1.6e-09 Score=72.57 Aligned_cols=47 Identities=21% Similarity=0.225 Sum_probs=42.2 Q ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE Q ss_conf 02100289759999200457388999999999789978999999830 Q gi|254780309|r 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59) Q Consensus 10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59) .....++||+|+||||+++||.|+.++++.|+++||+.|.++++.-. T Consensus 113 ~~~~~~~Gk~VliVDDvi~TG~T~~~~~~~l~~~Ga~~v~v~~~~~~ 159 (215) T 1o57_A 113 AKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLVEA 159 (215) T ss_dssp EGGGSCTTCEEEEEEEEESSSHHHHHHHHHTGGGTCEEEEEEEEEEE T ss_pred ECCCCCCCCEEEEEEEEHHCCHHHHHHHHHHHHCCCEEEEEEEEEEC T ss_conf 02210469789999972302867999999999879979999999989 No 23 >>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} (A:) Probab=98.93 E-value=1.7e-09 Score=72.39 Aligned_cols=46 Identities=22% Similarity=0.244 Sum_probs=41.7 Q ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE Q ss_conf 0210028975999920045738899999999978997899999983 Q gi|254780309|r 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59) Q Consensus 10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59) ....+++||+|+|||||++||.|+.++++.|++.||++|+++++-. T Consensus 113 ~~~~~v~gk~viIvDDii~TG~Tl~~a~~~Lk~~Ga~~V~~~~~i~ 158 (208) T 1wd5_A 113 RPKAARKGRDVVLVDDGVATGASXEAALSVVFQEGPRRVVVAVPVA 158 (208) T ss_dssp SCCCCCTTSEEEEECSCBSSCHHHHHHHHHHHTTCCSEEEEEEEEB T ss_pred CCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCC T ss_conf 8962448988999942214346699999999836998899982248 No 24 >>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12} (A:) Probab=98.91 E-value=3.8e-09 Score=70.48 Aligned_cols=47 Identities=21% Similarity=0.311 Sum_probs=42.6 Q ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE Q ss_conf 02100289759999200457388999999999789978999999830 Q gi|254780309|r 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59) Q Consensus 10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59) +....++|++|+||||+++||.|+.++++.|+++||+.|+++++.-. T Consensus 119 ~~~~~~~G~~vliVDDvi~tG~T~~~~~~~L~~~GA~~v~v~~~~~~ 165 (190) T 2dy0_A 119 HVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINL 165 (190) T ss_dssp EGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEE T ss_pred CCCCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHCCCEEEEEEEEEEC T ss_conf 15765899989998377441768999999999869989999999985 No 25 >>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, catalytic loop; HET: 9DA; 1.85A {Giardia intestinalis} (A:) Probab=98.90 E-value=1.2e-09 Score=73.28 Aligned_cols=44 Identities=27% Similarity=0.171 Sum_probs=39.4 Q ss_pred HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE Q ss_conf 10028975999920045738899999999978997899999983 Q gi|254780309|r 12 SKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59) Q Consensus 12 ~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59) ...++||+|+||||+++||.|+.++++.|+++|++.|.+++++- T Consensus 112 ~~~~~Gk~VliVDDvi~TG~T~~~~~~~l~~~Ga~vv~v~v~~~ 155 (186) T 1l1q_A 112 RQLGPHDVVLLHDDVLATGGTLLAAIELCETAGVKPENIYINVL 155 (186) T ss_dssp GGCCTTCCEEEEEEEESSSHHHHHHHHHHHHTTCCGGGEEEEEE T ss_pred HHCCCCCEEEEEEECHHHCHHHHHHHHHHHHCCCCEEEEEEEEE T ss_conf 34178998999973033256999999999987994688999999 No 26 >>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} (A:1-215) Probab=98.90 E-value=2.6e-09 Score=71.40 Aligned_cols=45 Identities=27% Similarity=0.378 Sum_probs=41.2 Q ss_pred HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE Q ss_conf 100289759999200457388999999999789978999999830 Q gi|254780309|r 12 SKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59) Q Consensus 12 ~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59) ...++||+|+||||+++||.|+.++++.|+++||+.|+++++.-. T Consensus 133 ~~~~~G~~VlIVDDvi~tG~T~~~~~~~l~~~GA~~v~~~~~~~~ 177 (215) T 1qb7_A 133 GSIGKGSRVVLIDDVLATGGTALSGLQLVEASDAVVVEMVSILSI 177 (215) T ss_dssp TSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEC T ss_pred CCCCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEEEEC T ss_conf 866789769999600624669999999999879979999999986 No 27 >>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii RH} (A:) Probab=98.90 E-value=5.5e-09 Score=69.64 Aligned_cols=48 Identities=21% Similarity=0.231 Sum_probs=42.9 Q ss_pred CHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE Q ss_conf 102100289759999200457388999999999789978999999830 Q gi|254780309|r 9 QYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59) Q Consensus 9 ~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59) .....+++||+|+||||+++||.|+..+.+.|++.||+++.++++.-. T Consensus 134 ~~~~~~i~gk~ViIvDdii~TG~Tl~~~~~~L~~~Ga~~v~i~~~~~~ 181 (233) T 1fsg_A 134 SDDLSIFRDKHVLIVEDIVDTGFTLTEFGERLKAVGPKSMRIATLVEK 181 (233) T ss_dssp CSCGGGGTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEE T ss_pred CCCCHHHCCCCEEEEECEECCCHHHHHHHHHHHCCCCCEEEEEEEEEE T ss_conf 677312117818998123244578999999997259987999999980 No 28 >>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} (A:11-155) Probab=98.90 E-value=3.2e-09 Score=70.92 Aligned_cols=45 Identities=33% Similarity=0.358 Sum_probs=38.0 Q ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEE Q ss_conf 021002897599992004573889999999997899789999998 Q gi|254780309|r 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFS 54 (59) Q Consensus 10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~la 54 (59) .....++||+||||||+++||.|+.++++.|+++|+.++..++.. T Consensus 79 ~~~~~~~gk~VliVDDii~TG~T~~~~~~~l~~~g~~~v~~~~v~ 123 (145) T 1ufr_A 79 RIPFDLTGKAIVLVDDVLYTGRTARAALDALIDLGRPRRIYLAVL 123 (145) T ss_dssp EECSCCTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEE T ss_pred CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEE T ss_conf 576665687599995244667059999999852289968999999 No 29 >>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} (A:40-184) Probab=98.89 E-value=2.2e-09 Score=71.74 Aligned_cols=46 Identities=20% Similarity=0.286 Sum_probs=41.9 Q ss_pred HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE Q ss_conf 2100289759999200457388999999999789978999999830 Q gi|254780309|r 11 VSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59) Q Consensus 11 ~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59) ....++||+|+||||+++||.|+.++.+.|+++|+++|.++++... T Consensus 72 ~~~~~~gk~VliVDDvi~TG~T~~~~~~~L~~~ga~~v~~a~l~~~ 117 (145) T 1lh0_A 72 LVGSALQGRVMLVDDVITAGTAIRESMEIIQAHGATLAGVLISLDR 117 (145) T ss_dssp EEESCCCSEEEEECSCCSSSCHHHHHHHHHHHTTCEEEEEEEEEEC T ss_pred CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEEEEE T ss_conf 1367777609999731243664899999999879969999999861 No 30 >>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A* (A:1-20,A:44-207) Probab=98.89 E-value=3.3e-09 Score=70.81 Aligned_cols=45 Identities=24% Similarity=0.285 Sum_probs=41.2 Q ss_pred HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE Q ss_conf 100289759999200457388999999999789978999999830 Q gi|254780309|r 12 SKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59) Q Consensus 12 ~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59) ...++||+|+||||+++||.|+.++++.|+++|+++|.++++.-. T Consensus 97 ~~~~~gk~VllVDDii~TG~Tl~~~~~~L~~~Ga~~V~~~~l~~~ 141 (184) T 2ps1_A 97 GSALENKRILIIDDVMTAGTAINEAFEIISNAKGQVVGSIIALDR 141 (184) T ss_dssp ESCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEEC T ss_pred CCCCCCCCEEEEEHHHCCCCCHHHHHHHHHHHCCCCCEEEEEEEC T ss_conf 874544433552201201622388999987606766479999960 No 31 >>2ywu_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 2ywt_A* 2yws_A* (A:) Probab=98.88 E-value=3.7e-09 Score=70.57 Aligned_cols=47 Identities=15% Similarity=0.237 Sum_probs=41.9 Q ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE Q ss_conf 02100289759999200457388999999999789978999999830 Q gi|254780309|r 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59) Q Consensus 10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59) ....+++||+|+||||+++||.|+.++++.|++.|++++.++++.-. T Consensus 88 ~~~~~~~gk~VliVDDvi~TG~Tl~~~~~~l~~~G~~~v~~~~~~~~ 134 (181) T 2ywu_A 88 DLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSK 134 (181) T ss_dssp CCCSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEC T ss_pred CCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEEEEC T ss_conf 67544456526999888616478999999998629965999999983 No 32 >>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens} (A:39-171) Probab=98.86 E-value=3.9e-09 Score=70.45 Aligned_cols=45 Identities=22% Similarity=0.279 Sum_probs=41.6 Q ss_pred HCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEC Q ss_conf 002897599992004573889999999997899789999998306 Q gi|254780309|r 13 KHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSL 57 (59) Q Consensus 13 ~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~ 57 (59) ..++||+|+||||+++||.|+.++.+.|+++|++.|.++++..-. T Consensus 69 ~~~~G~~VliVDDii~tG~T~~~~~~~l~~~ga~~v~~~vl~~~~ 113 (133) T 2wns_A 69 TINPGETCLIIEDVVTSGSSVLETVEVLQKEGLKVTDAIVLLDRE 113 (133) T ss_dssp CCCTTCBEEEEEEEESSSHHHHHHHHHHHHTTCBCCEEEEEEECC T ss_pred CCCCCCEEEEEEEEEHHCHHHHHHHHHHHHCCCEEEEEEEEEECC T ss_conf 778999999998650125679999999998799799999999788 No 33 >>2ehj_A Uracil phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Escherichia coli} (A:) Probab=98.86 E-value=5e-09 Score=69.86 Aligned_cols=50 Identities=22% Similarity=0.311 Sum_probs=44.6 Q ss_pred CCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEC Q ss_conf 51021002897599992004573889999999997899789999998306 Q gi|254780309|r 8 PQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSL 57 (59) Q Consensus 8 ~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~ 57 (59) ......+++||+|+|+||+++||.|+..+++.|++.||++|++++..-+. T Consensus 114 ~~~~~~~v~g~~viivDdii~TG~T~~~a~~~L~~~Ga~~I~~~~~h~~~ 163 (208) T 2ehj_A 114 FQKLVSNIDERMALIVDPMLATGGSVIATIDLLKKAGCSSIKVLVLVAAP 163 (208) T ss_dssp EEECCSCGGGCEEEEEEEEESSCHHHHHHHHHHHHTTCCEEEEEEEEECH T ss_pred EEEEECCCCCCEEEEECHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEECH T ss_conf 88760345664599972254166569999999984799857999996157 No 34 >>2p1z_A Phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 2.44A {Corynebacterium diphtheriae NCTC13129} (A:) Probab=98.85 E-value=3.8e-09 Score=70.47 Aligned_cols=47 Identities=34% Similarity=0.453 Sum_probs=42.0 Q ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE Q ss_conf 02100289759999200457388999999999789978999999830 Q gi|254780309|r 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59) Q Consensus 10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59) .....++||+|+||||+++||.|+.++++.|++.||+.|.++++.-. T Consensus 107 ~~~~~~~G~~vliVDDii~tG~T~~~~~~~l~~~Ga~~v~~~~~~~~ 153 (180) T 2p1z_A 107 IEGPDVVGKKVLVVEDTTTTGNSPLTAVKALREAGAEVVGVATVVDR 153 (180) T ss_dssp EESSCCTTCEEEEEEEECSSSHHHHHHHHHHHHHTCEEEEEEEEEC- T ss_pred CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEC T ss_conf 00132455324334878776565999999999879979999999988 No 35 >>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix} (A:1-10,A:35-178) Probab=98.85 E-value=7.4e-09 Score=68.94 Aligned_cols=48 Identities=21% Similarity=0.227 Sum_probs=43.1 Q ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEC Q ss_conf 021002897599992004573889999999997899789999998306 Q gi|254780309|r 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSL 57 (59) Q Consensus 10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~ 57 (59) .....++||+|+||||+++||.|+.++.+.|+++|++.++++++.... T Consensus 75 ~~~~~~~g~~VlivDDii~tG~T~~~~~~~l~~~ga~~v~~~vl~~~~ 122 (154) T 2yzk_A 75 QVEGDPPKGRVVVVDDVATTGTSIAKSIEVLRSNGYTVGTALVLVDRG 122 (154) T ss_dssp CCBTCCCSSEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECC T ss_pred CCCCCCCCCEEEEEEHHHHCCCCHHHHHHHHHHCCCEEEEEEEEEECC T ss_conf 223555785699986021036577899999987899799999999887 No 36 >>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomics, JCSG, PSI, protein structure initiative; HET: U5P; 2.30A {Thermotoga maritima} (A:) Probab=98.82 E-value=4.6e-09 Score=70.07 Aligned_cols=50 Identities=18% Similarity=0.256 Sum_probs=44.1 Q ss_pred CCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEC Q ss_conf 51021002897599992004573889999999997899789999998306 Q gi|254780309|r 8 PQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSL 57 (59) Q Consensus 8 ~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~ 57 (59) ......+++||+|+|+||+++||.|+..+++.|++.||++|++++..-.. T Consensus 127 ~~~l~~dv~g~~viivDdii~TG~T~~~a~~~Lk~~Ga~~I~~~~~h~~~ 176 (221) T 1o5o_A 127 YAKLPPLNDDKEVFLLDPMLATGVSSIKAIEILKENGAKKITLVALIAAP 176 (221) T ss_dssp EEECCCCCTTCEEEEECSEESSSHHHHHHHHHHHHTTCCEEEEECSEECH T ss_pred EEECCCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEECH T ss_conf 45468665687499887886377249999999986699838999987468 No 37 >>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} (A:143-270) Probab=98.81 E-value=7.4e-09 Score=68.93 Aligned_cols=45 Identities=22% Similarity=0.327 Sum_probs=41.0 Q ss_pred HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE Q ss_conf 210028975999920045738899999999978997899999983 Q gi|254780309|r 11 VSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59) Q Consensus 11 ~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59) ....++||+|+||||+++||.|+.++++.|+++||+++++++++- T Consensus 57 ~~~~~~gk~vlIvDDii~tG~Tl~~~~~~l~~~ga~~v~~~v~~~ 101 (128) T 1u9y_A 57 KTLDAKDRDVFIVDDIISTGGTMATAVKLLKEQGAKKIIAACVHP 101 (128) T ss_dssp SSCCCTTCCEEEEEEECSSSHHHHHHHHHHHHTTCCSEEEEEEEC T ss_pred CCCCCCCCEEEEECHHHHCCHHHHHHHHHHHHCCCCEEEEEEECC T ss_conf 124566866999841541334079999999866998699999897 No 38 >>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics; 2.10A {Thermus thermophilus HB8} (A:) Probab=98.81 E-value=3.8e-09 Score=70.51 Aligned_cols=46 Identities=26% Similarity=0.374 Sum_probs=42.0 Q ss_pred HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE Q ss_conf 2100289759999200457388999999999789978999999830 Q gi|254780309|r 11 VSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59) Q Consensus 11 ~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59) ...+++||+|+||||+++||.|+.++++.|++.||++|++++..-+ T Consensus 117 ~~~dv~g~~viivDdii~TG~T~~~a~~~Lk~~Ga~~I~~~~~h~~ 162 (208) T 1v9s_A 117 LPPDIAERRAFLLDPXLATGGSASLALSLLKERGATGVKLXAILAA 162 (208) T ss_dssp CCSCGGGSCEEEECSEESSSHHHHHHHHHHHHTTCCSCEEEEEEEC T ss_pred CCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEC T ss_conf 5865345669997806642477999999998659984699999854 No 39 >>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, magnesium, pyrimidine biosynthesis; 2.40A {Streptococcus mutans} (A:100-183) Probab=98.78 E-value=9.1e-09 Score=68.44 Aligned_cols=40 Identities=25% Similarity=0.468 Sum_probs=36.6 Q ss_pred HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 1002897599992004573889999999997899789999 Q gi|254780309|r 12 SKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSIL 51 (59) Q Consensus 12 ~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~ 51 (59) ....+||+|+||||+++||.|+.++++.|+++|++.|+++ T Consensus 45 ~~~~~Gk~vliVDDiv~tG~Tl~~~~~~l~~~Ga~~v~a~ 84 (84) T 3dez_A 45 GRVTKGQKMVIIEDLISTGGSVLDAVAAAQREGADVLGVV 84 (84) T ss_dssp SCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEE T ss_pred EECCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCEEEEEE T ss_conf 2138999799996304577556899999998799799999 No 40 >>2h06_A Ribose-phosphate pyrophosphokinase I; PRS1, PRPP synthetase 1, phosphoribosyl pyrophosphate synthetase 1, transferase; 2.20A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h07_A 2h08_A (A:148-292) Probab=98.76 E-value=1e-08 Score=68.19 Aligned_cols=46 Identities=28% Similarity=0.192 Sum_probs=41.9 Q ss_pred HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEC Q ss_conf 1002897599992004573889999999997899789999998306 Q gi|254780309|r 12 SKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSL 57 (59) Q Consensus 12 ~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~ 57 (59) ...++||+|+||||+++||.|+.++++.|+++|+++|++++++.-. T Consensus 61 ~~~~~gk~vliVDD~i~tG~T~~~~~~~l~~~ga~~v~~~~~~~~~ 106 (145) T 2h06_A 61 VGDVKDRVAILVDDMADTCGTICHAADKLLSAGATRVYAILTHGIF 106 (145) T ss_dssp ESCCTTEEEEEEEEEESSCHHHHHHHHHHHHTTEEEEEEEEEEECC T ss_pred ECCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCC T ss_conf 0233353289976630453427777788861698348997434302 No 41 >>2jky_A Hypoxanthine-guanine phosphoribosyltransferase; nucleus, cytoplasm, magnesium, GMP complex, FLIP peptide-plane, glycosyltransferase; HET: 5GP; 2.3A {Saccharomyces cerevisiae} PDB: 2jkz_A* (A:10-185) Probab=98.75 E-value=2.4e-10 Score=77.00 Aligned_cols=46 Identities=22% Similarity=0.250 Sum_probs=40.3 Q ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE Q ss_conf 0210028975999920045738899999999978997899999983 Q gi|254780309|r 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59) Q Consensus 10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59) ....+++||+|+||||+++||.|+.++++.|++.||++|.++++.. T Consensus 86 ~~~~~~~g~~VlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~~~ 131 (176) T 2jky_A 86 QCKLDLVGKNVLIVDEVDDTRTTLHYALSELEKDAAEQAKAKGIDT 131 (176) T ss_dssp CCCCCCTTCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTCCT T ss_pred CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHC T ss_conf 7654568987999815358518999999999860807764455530 No 42 >>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, protein structure initiative; 1.95A {Streptococcus pyogenes} (A:68-174) Probab=98.75 E-value=1.9e-08 Score=66.78 Aligned_cols=44 Identities=25% Similarity=0.419 Sum_probs=40.5 Q ss_pred HCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE Q ss_conf 00289759999200457388999999999789978999999830 Q gi|254780309|r 13 KHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59) Q Consensus 13 ~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59) ...+|++|+||||+++||.|+.++++.|+++||+.+.++++.-- T Consensus 46 ~~~~g~~vliVDDii~tG~T~~~~~~~l~~~Ga~~v~~~v~~~~ 89 (107) T 2aee_A 46 RVLKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTY 89 (107) T ss_dssp CCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEC T ss_pred CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEC T ss_conf 14799879884898887777887755688739857689999733 No 43 >>2e55_A Uracil phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.15A {Aquifex aeolicus} (A:) Probab=98.73 E-value=2.1e-08 Score=66.45 Aligned_cols=46 Identities=17% Similarity=0.222 Sum_probs=41.3 Q ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE Q ss_conf 0210028975999920045738899999999978997899999983 Q gi|254780309|r 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59) Q Consensus 10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59) ....+++||+|+|+||+++||.|+..+++.|++.||++|++...-- T Consensus 114 ~~~~d~~g~~viivDdii~TG~T~~~a~~~L~~~Ga~~I~~~h~i~ 159 (208) T 2e55_A 114 SRLPELKGKIVVILDPMLATGGTLEVALREILKHSPLKVKSVHAIA 159 (208) T ss_dssp EECCCCBTSEEEEECSEESSSHHHHHHHHHHHTTCBSEEEEEEEEE T ss_pred HHHHHCCCCCEEEECHHHCCCHHHHHHHHHHHHCCCCCEEEEEEEE T ss_conf 2244305770798616763773799999998625886179999986 No 44 >>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} (A:) Probab=98.71 E-value=1.7e-08 Score=66.91 Aligned_cols=43 Identities=14% Similarity=0.115 Sum_probs=39.6 Q ss_pred HCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE Q ss_conf 0028975999920045738899999999978997899999983 Q gi|254780309|r 13 KHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59) Q Consensus 13 ~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59) .+++||+|+|+||+++||.|+..+++.|++.||++|++++..- T Consensus 129 ~~v~gk~viIvDdii~tG~T~~~a~~~L~~~Ga~~I~~~~~~~ 171 (216) T 1xtt_A 129 IRAKVDNVIIADPMIATASTMLKVLEEVVKANPKRIYIVSIIS 171 (216) T ss_dssp CCTTTCEEEEECSEESSSHHHHHHHHHHGGGCCSEEEEECSEE T ss_pred CCCCCCEEEEECHHHHCCHHHHHHHHHHHHCCCCEEEEEEEEE T ss_conf 4344633787281674307699999998515997699999986 No 45 >>1dqn_A Guanine phosphoribosyltransferase; protein-inhibitor complex, Mg IONS, pyrophosphate, transition state analogue; HET: IMU; 1.75A {Giardia lamblia} (A:60-175) Probab=98.69 E-value=2.7e-09 Score=71.31 Aligned_cols=44 Identities=16% Similarity=0.160 Sum_probs=39.5 Q ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEE Q ss_conf 02100289759999200457388999999999789978999999 Q gi|254780309|r 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTF 53 (59) Q Consensus 10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~l 53 (59) .....++||+||||||+++||.|+.++++.|+++|++.+.+++. T Consensus 52 ~~~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~~ 95 (116) T 1dqn_A 52 DLKQLKEKREVVLIDEYVDSGHTIFSIQEQIKHAKICSCFVKDV 95 (116) T ss_dssp HHHHHHHCSSEEEEEEEESSSHHHHHHHHHSTTCEEEEEEESCH T ss_pred CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEE T ss_conf 23312378737997311235689999999865459966999753 No 46 >>1nul_A XPRT, xanthine-guanine phosphoribosyltransferase; purine salvage enzyme; 1.80A {Escherichia coli} (A:9-131) Probab=98.69 E-value=1.6e-09 Score=72.45 Aligned_cols=48 Identities=29% Similarity=0.281 Sum_probs=41.6 Q ss_pred HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECCC Q ss_conf 100289759999200457388999999999789978999999830689 Q gi|254780309|r 12 SKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLKD 59 (59) Q Consensus 12 ~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~~~ 59 (59) ..+++||+|+||||+++||.|+.++++.|++.|+..|+..+-++..+| T Consensus 68 ~~~~~g~~VliVDDii~tG~Tl~~~~~~l~~~ga~~v~~~~~~~~~~d 115 (123) T 1nul_A 68 RAEGDGEGFIVIDDLVDTGGTAVAIREMYPKAHFVTIFAKPAGRPLVD 115 (123) T ss_dssp CCSSCCTTEEEEEEEECTTSSHHHHHHHCTTSEEEEEEECGGGGGGCS T ss_pred CCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCC T ss_conf 257789827999704365399999998667764999998068884798 No 47 >>3dah_A Ribose-phosphate pyrophosphokinase; seattle structural genomics center for infectious disease, ssgcid, cytoplasm, magnesium; HET: AMP; 2.30A {Burkholderia pseudomallei 1710B} (A:153-295) Probab=98.68 E-value=4.8e-08 Score=64.55 Aligned_cols=47 Identities=30% Similarity=0.279 Sum_probs=42.2 Q ss_pred HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECC Q ss_conf 10028975999920045738899999999978997899999983068 Q gi|254780309|r 12 SKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLK 58 (59) Q Consensus 12 ~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~~ 58 (59) ....+|++|+||||+++||.|+..+++.|++.||+.+++.+++-..+ T Consensus 59 ~~~~~g~~viivDDii~tG~T~~~~~~~l~~~ga~~v~~~~~~~~~~ 105 (143) T 3dah_A 59 IGEVEGRTCVIMDDMVDTAGTLCKAAQVLKERGAKQVFAYATHPVLS 105 (143) T ss_dssp ----CCSEEEEEEEEESSCHHHHHHHHHHHHTTCSCEEEEEEEECCC T ss_pred CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCC T ss_conf 55668988999788656668899999999976998799976667648 No 48 >>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} (D:) Probab=98.66 E-value=1.5e-08 Score=67.31 Aligned_cols=49 Identities=14% Similarity=0.133 Sum_probs=42.7 Q ss_pred CCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE Q ss_conf 5102100289759999200457388999999999789978999999830 Q gi|254780309|r 8 PQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59) Q Consensus 8 ~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59) ......+++||+|+|+||+++||.|+.++++.|++.||+++++.+.+-. T Consensus 147 ~~~~~~dv~gr~vIIvDdii~TG~T~~~a~~~Lk~~Ga~~i~~~~th~i 195 (243) T 1bd3_D 147 YEKLPADIRERWVMLLDPMCATAGSVCKAIEVLLRLGVKEERIIFVNIL 195 (243) T ss_dssp EEECCTTGGGSEEEEECSEESSCHHHHHHHHHHHHHTCCGGGEEEEEEE T ss_pred HHHCCCCCCCCEEEEECHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEEE T ss_conf 8458765345648985746605377999999999739974217999998 No 49 >>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} (A:154-295) Probab=98.65 E-value=3.1e-08 Score=65.53 Aligned_cols=43 Identities=33% Similarity=0.342 Sum_probs=40.1 Q ss_pred HCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE Q ss_conf 0028975999920045738899999999978997899999983 Q gi|254780309|r 13 KHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59) Q Consensus 13 ~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59) ..++||+|+||||+++||.|+.++++.|++.||+.+.+++++- T Consensus 60 ~~~~G~~VliVDDvi~tG~T~~~~~~~l~~~Ga~~v~~~~~~~ 102 (142) T 1dku_A 60 GNIEGKTAILIDDIIDTAGTITLAANALVENGAKEVYACCTHP 102 (142) T ss_dssp SCCTTCEEEEECSEESSCHHHHHHHHHHHHTTCSEEEEECSEE T ss_pred CCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEECC T ss_conf 3547968998776112478899999999976995489998435 No 50 >>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} (A:) Probab=98.65 E-value=1.1e-08 Score=67.93 Aligned_cols=48 Identities=19% Similarity=0.162 Sum_probs=42.4 Q ss_pred CHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE Q ss_conf 102100289759999200457388999999999789978999999830 Q gi|254780309|r 9 QYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59) Q Consensus 9 ~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59) ..+..+++||+++|+||++.||.|+..+++.|++.||+++++++.+-. T Consensus 121 ~~l~~dv~~k~viIvDdmi~TG~T~i~a~~~Lk~~Ga~~v~i~~th~i 168 (217) T 3dmp_A 121 LVRLPDLEDRIFILCDPMVATGYSAAHAIDVLKRRGVPGERLMFLALV 168 (217) T ss_dssp EEECCCCTTCEEEEECSEESSSHHHHHHHHHHHTTTCCGGGEEEECSE T ss_pred EECCCCHHHCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEE T ss_conf 662897343579998043367088999999999869995179999999 No 51 >>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} (A:120-236) Probab=79.58 E-value=3.8 Score=21.85 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=30.3 Q ss_pred CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEE Q ss_conf 28975999920045738899999999978997899999 Q gi|254780309|r 15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILT 52 (59) Q Consensus 15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~ 52 (59) ++||+|+|+ =+|.+-..++..|.+.|+++|+++. T Consensus 1 l~~k~vli~----GaGg~a~ai~~~L~~~g~~~i~I~~ 34 (117) T 3fbt_A 1 IKNNICVVL----GSGGAARAVLQYLKDNFAKDIYVVT 34 (117) T ss_dssp CTTSEEEEE----CSSTTHHHHHHHHHHTTCSEEEEEE T ss_pred CCCCEEEEE----CCCCHHHHHHHHHHHCCCCEEEEEE T ss_conf 566523554----2563222233334415552699874 No 52 >>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, FMN, FAD, iron, 3Fe-4S, 4Fe-4S, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense} (G:217-322,G:368-379) Probab=73.88 E-value=7.7 Score=20.23 Aligned_cols=36 Identities=25% Similarity=0.297 Sum_probs=31.4 Q ss_pred CCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEE Q ss_conf 0289759999200457388999999999789978999999 Q gi|254780309|r 14 HVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTF 53 (59) Q Consensus 14 ~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~l 53 (59) ...||+|++| =.|.|...++..+...||++|+++.. T Consensus 45 ~~~gK~VvVI----GgG~~A~D~A~~~~r~Ga~~Vtvv~R 80 (118) T 2vdc_G 45 NAAGKHVVVL----GGGDTAMDCVRTAIRQGATSVKCLYR 80 (118) T ss_dssp CCCCSEEEEE----CSSHHHHHHHHHHHHTTCSEEEEECS T ss_pred CCCCCEEEEE----CCCHHHHHHHHHHHHCCCCEEEEEEE T ss_conf 4578869998----99717899999998614880899751 No 53 >>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, aromatic amino acid biosynthesis, NADP; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* (A:100-250) Probab=62.95 E-value=8.9 Score=19.88 Aligned_cols=38 Identities=21% Similarity=0.256 Sum_probs=32.4 Q ss_pred HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEE Q ss_conf 210028975999920045738899999999978997899999 Q gi|254780309|r 11 VSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILT 52 (59) Q Consensus 11 ~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~ 52 (59) ...++++|+++|+ =.|.+-..+++.|.+.|++++.++. T Consensus 12 ~~~~~~~k~vlvi----GaG~~g~~va~~L~~~g~~~i~i~~ 49 (151) T 3don_A 12 IYEGIEDAYILIL----GAGGASKGIANELYKIVRPTLTVAN 49 (151) T ss_dssp HSTTGGGCCEEEE----CCSHHHHHHHHHHHTTCCSCCEEEC T ss_pred CCCCCCCCEEEEC----CCCCCHHHHHHHHHHHCCCHHHHHH T ss_conf 2356555324411----3444203344566641110134444 No 54 >>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} (A:102-253) Probab=61.07 E-value=14 Score=18.75 Aligned_cols=37 Identities=22% Similarity=0.277 Sum_probs=32.0 Q ss_pred HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 21002897599992004573889999999997899789999 Q gi|254780309|r 11 VSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSIL 51 (59) Q Consensus 11 ~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~ 51 (59) ....++||+++|+ =.|.+...++..|.+.|++++.++ T Consensus 12 ~~~~~~~k~vlIi----GaGg~a~av~~~l~~~g~~~i~I~ 48 (152) T 1npy_A 12 KYHLNKNAKVIVH----GSGGMAKAVVAAFKNSGFEKLKIY 48 (152) T ss_dssp HTTCCTTSCEEEE----CSSTTHHHHHHHHHHTTCCCEEEE T ss_pred HHCCCCCCCEEEE----CCHHHHHHHHHHHHHCCCCEEEEE T ss_conf 2002578718998----561788887988866487464200 No 55 >>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} (A:138-262) Probab=59.23 E-value=16 Score=18.57 Aligned_cols=33 Identities=24% Similarity=0.389 Sum_probs=29.8 Q ss_pred CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 2897599992004573889999999997899789999 Q gi|254780309|r 15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSIL 51 (59) Q Consensus 15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~ 51 (59) ++|++|+|+ =.|.+-+++++.|...|++++.++ T Consensus 2 l~~~~vlii----GaGg~g~~v~~~L~~~Gv~~i~i~ 34 (125) T 2egg_A 2 LDGKRILVI----GAGGGARGIYFSLLSTAAERIDMA 34 (125) T ss_dssp CTTCEEEEE----CCSHHHHHHHHHHHTTTCSEEEEE T ss_pred CCCCEEEEE----CCCCHHHHHHHHHHHCCCCCCCCC T ss_conf 678769997----676136888999997499621120 No 56 >>1dcf_A ETR1 protein; beta-alpha five sandwich; 2.50A {Arabidopsis thaliana} (A:) Probab=53.87 E-value=19 Score=18.07 Aligned_cols=34 Identities=21% Similarity=0.303 Sum_probs=23.5 Q ss_pred HCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEE Q ss_conf 0028975999920045738899999999978997899 Q gi|254780309|r 13 KHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVS 49 (59) Q Consensus 13 ~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~ 49 (59) +.++|++||+|||-- .......+.|...|..... T Consensus 3 ~~~~~~riLvVdd~~---~~~~~~~~~L~~~G~~v~~ 36 (136) T 1dcf_A 3 SNFTGLKVLVMDENG---VSRMVTKGLLVHLGCEVTT 36 (136) T ss_dssp CCCTTCEEEEECSCH---HHHHHHHHHHHHTTCEEEE T ss_pred CCCCCCEEEEEECCH---HHHHHHHHHHHHCCCEEEE T ss_conf 989999999995999---9999999999987999999 No 57 >>3dah_A Ribose-phosphate pyrophosphokinase; seattle structural genomics center for infectious disease, ssgcid, cytoplasm, magnesium; HET: AMP; 2.30A {Burkholderia pseudomallei 1710B} (A:1-152,A:296-319) Probab=53.09 E-value=20 Score=17.99 Aligned_cols=42 Identities=17% Similarity=0.248 Sum_probs=32.1 Q ss_pred HHHCCCCCEEEEEEECCCCCH----HHHHHHHHHHHCCCCEEEEEE Q ss_conf 210028975999920045738----899999999978997899999 Q gi|254780309|r 11 VSKHVAGLKILLIDDVYTTGA----TAKCAAIALKKAGAMTVSILT 52 (59) Q Consensus 11 ~~~~i~gk~vliVDDiitTG~----T~~~~~~~L~~~ga~~V~~~~ 52 (59) ....++|++|+||-+....-. -+--.+..+++.||++|.++. T Consensus 48 i~~~vrg~dV~iiqs~~~~~nd~lmeLlll~dAlr~~gA~rItlVi 93 (176) T 3dah_A 48 IQENVRGKDVFVLQSTCAPTNDNLMELMIMVDALKRASAGRITAAI 93 (176) T ss_dssp ECSCCBTCEEEEECCCCSSHHHHHHHHHHHHHHHHHTTBSEEEEEE T ss_pred ECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE T ss_conf 6897469869999279998506799999999999873897699996 No 58 >>2o7s_A DHQ-SDH, bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase; NADPH, dehydroshikimate, bifunctional enzyme, oxidoreductase; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* (A:334-523) Probab=49.52 E-value=19 Score=18.09 Aligned_cols=43 Identities=23% Similarity=0.227 Sum_probs=33.7 Q ss_pred EEEECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEE Q ss_conf 08825102100289759999200457388999999999789978999 Q gi|254780309|r 4 AFNVPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSI 50 (59) Q Consensus 4 af~i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~ 50 (59) ..+.-+....++++|+++|+ =+|.+-..++..|.+.|++.+.+ T Consensus 18 ~~~~l~~~~~~~~~k~vlvi----GaG~~~~~~~~~L~~~g~~~~i~ 60 (190) T 2o7s_A 18 DPSSVPSSSSPLASKTVVVI----GAGGAGKALAYGAKEKGAKVVIA 60 (190) T ss_dssp ---------------CEEEE----CCSHHHHHHHHHHHHHCC-CEEE T ss_pred CCHHHCCCCCHHHHHHHHHH----HCCCCCHHHHHHHHHCCCEEEEE T ss_conf 30121035414777899986----32661020021255358458850 No 59 >>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40} (A:1-65) Probab=46.20 E-value=26 Score=17.38 Aligned_cols=35 Identities=23% Similarity=0.214 Sum_probs=23.7 Q ss_pred HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEE Q ss_conf 10028975999920045738899999999978997899 Q gi|254780309|r 12 SKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVS 49 (59) Q Consensus 12 ~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~ 49 (59) ....++.+||+|||--+. ...+...|++.|..... T Consensus 5 ~~~~~~~~iLiVDD~~~~---~~~~~~~L~~~G~~v~~ 39 (65) T 3c97_A 5 PSQIMPLSVLIAEDNDIC---RLVAAKALEKCTNDITV 39 (65) T ss_dssp -----CCEEEEECCCHHH---HHHHHHHHTTTCSEEEE T ss_pred CCCCCCCEEEEEECCHHH---HHHHHHHHHHCCCEEEE T ss_conf 999999989999598999---99999999987999999 No 60 >>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus} (A:) Probab=43.36 E-value=29 Score=17.13 Aligned_cols=31 Identities=23% Similarity=0.260 Sum_probs=19.7 Q ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEE Q ss_conf 9759999200457388999999999789978999 Q gi|254780309|r 17 GLKILLIDDVYTTGATAKCAAIALKKAGAMTVSI 50 (59) Q Consensus 17 gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~ 50 (59) |++||||||--+ ......+.|...|...+.+ T Consensus 1 g~rILiVdDd~~---~~~~l~~~L~~~G~~v~~a 31 (119) T 2j48_A 1 AGHILLLEEEDE---AATVVCEMLTAAGFKVIWL 31 (119) T ss_dssp CCEEEEECCCHH---HHHHHHHHHHHTTCEEEEE T ss_pred CCEEEEEECCHH---HHHHHHHHHHHCCCCEEEE T ss_conf 999999987899---9999999999769976997 No 61 >>1v7l_A 3-isopropylmalate dehydratase small subunit; beta barrel, lyase; 1.98A {Pyrococcus horikoshii OT3} (A:) Probab=42.76 E-value=5.9 Score=20.85 Aligned_cols=48 Identities=23% Similarity=0.330 Sum_probs=41.4 Q ss_pred CCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE Q ss_conf 510210028975999920045738899999999978997899999983 Q gi|254780309|r 8 PQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59) Q Consensus 8 ~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59) .++.....++-+|++..+-+=+|++=.+++..++..|.+.|..-.+|| T Consensus 42 ~~~~~~~~k~~~iiVaG~nfG~GSSRE~A~~al~~~G~~aVIA~SFar 89 (163) T 1v7l_A 42 RPDFARNVRPGDVVVAGKNFGIGSSRESAALALKALGIAGVIAESFGR 89 (163) T ss_dssp CTTHHHHCCTTCEEECCSSBTBSCCCTHHHHHHHHHTCCEEEESCBCH T ss_pred CCHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHCCEEEEHHHHHHH T ss_conf 941454144567799744445686650488998753351222667889 No 62 >>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901} (A:) Probab=42.49 E-value=30 Score=17.06 Aligned_cols=29 Identities=34% Similarity=0.360 Sum_probs=12.8 Q ss_pred CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCC Q ss_conf 28975999920045738899999999978997 Q gi|254780309|r 15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAM 46 (59) Q Consensus 15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~ 46 (59) ++|++||||||-- .........|...|.. T Consensus 3 ~~~~riLiVDD~~---~~~~~l~~~L~~~g~~ 31 (140) T 3h5i_A 3 LKDKKILIVEDSK---FQAKTIANILNKYGYT 31 (140) T ss_dssp ---CEEEEECSCH---HHHHHHHHHHHHTTCE T ss_pred CCCCEEEEEECCH---HHHHHHHHHHHCCCEE T ss_conf 8999999996999---9999999998508869 No 63 >>2hcu_A 3-isopropylmalate dehydratase small subunit; beta barrel, lyase; 2.10A {Streptococcus mutans} (A:) Probab=39.93 E-value=14 Score=18.82 Aligned_cols=42 Identities=24% Similarity=0.306 Sum_probs=37.1 Q ss_pred CCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE Q ss_conf 028975999920045738899999999978997899999983 Q gi|254780309|r 14 HVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59) Q Consensus 14 ~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59) .-++.+|++..+-+-+|++=.+++..++..|.+-|..-.++| T Consensus 82 ~~~~~~IlVaG~nfG~GSSREhAa~al~~~Gi~aVIA~SFa~ 123 (213) T 2hcu_A 82 EYREASILITGDNFGAGSSREHAAWALADYGFKVIVAGSFGD 123 (213) T ss_dssp GGTTCCEEEECSSBTCSSCCHHHHHHHHHHTCCEEEESCBCH T ss_pred CCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECHHH T ss_conf 356774897156100464257786768758604898600778 No 64 >>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consortium, SGC, cytoplasm, polymorphism, protein binding; 2.60A {Homo sapiens} (A:) Probab=39.67 E-value=33 Score=16.81 Aligned_cols=42 Identities=17% Similarity=0.044 Sum_probs=33.9 Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEC Q ss_conf 897599992004573889999999997899789999998306 Q gi|254780309|r 16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSL 57 (59) Q Consensus 16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~ 57 (59) .|-.|+=|++.-.+|.|..++.+.|+.........+...|.. T Consensus 49 ~GD~Il~INg~~v~~~~~~~v~~~lk~~~~~~~i~l~v~r~~ 90 (95) T 3gge_A 49 VGDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIEPK 90 (95) T ss_dssp TTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEEEEEEEEEC T ss_pred CCCEEEEECCCEECCCCHHHHHHHHHCCCCCCEEEEEEECCC T ss_conf 688998999907549758999999963999978999995688 No 65 >>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} (A:111-270) Probab=38.23 E-value=33 Score=16.81 Aligned_cols=38 Identities=21% Similarity=0.282 Sum_probs=31.9 Q ss_pred HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEE Q ss_conf 210028975999920045738899999999978997899999 Q gi|254780309|r 11 VSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILT 52 (59) Q Consensus 11 ~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~ 52 (59) ...++++|++||+ =+|.+-..++..|.+.|+..|.... T Consensus 12 ~~~~~~~k~vLVi----GaGg~~~~v~~~L~~~g~~~I~~r~ 49 (160) T 1nvt_A 12 EIGRVKDKNIVIY----GAGGAARAVAFELAKDNNIIIANRT 49 (160) T ss_dssp HHCCCCSCEEEEE----CCSHHHHHHHHHHTSSSEEEEECSS T ss_pred CCCCCCCCEEEEE----CCHHHHHHHHHHHHCCCEEEEEECC T ss_conf 0355678759997----5238899999998508869999388 No 66 >>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A* (A:1-175,A:352-379) Probab=36.06 E-value=38 Score=16.49 Aligned_cols=41 Identities=17% Similarity=0.177 Sum_probs=31.9 Q ss_pred HHHCCCCCEEEEEEECCCCCH----HHHHHHHHHHHCCCCEEEEE Q ss_conf 210028975999920045738----89999999997899789999 Q gi|254780309|r 11 VSKHVAGLKILLIDDVYTTGA----TAKCAAIALKKAGAMTVSIL 51 (59) Q Consensus 11 ~~~~i~gk~vliVDDiitTG~----T~~~~~~~L~~~ga~~V~~~ 51 (59) ....+.|++|+||......-. -+--.+..++++||++|.++ T Consensus 73 i~e~vrg~dV~IIqs~~~~~nd~lmELlllidAlr~~gA~~ItlV 117 (203) T 2ji4_A 73 IQESVRGKDVFIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGV 117 (203) T ss_dssp ECSCCTTCEEEEECCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEE T ss_pred ECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEE T ss_conf 688768996899927999813789999999999987377525897 No 67 >>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} (A:1-153,A:296-317) Probab=34.88 E-value=39 Score=16.38 Aligned_cols=42 Identities=21% Similarity=0.264 Sum_probs=32.2 Q ss_pred HHHCCCCCEEEEEEECCCCCH----HHHHHHHHHHHCCCCEEEEEE Q ss_conf 210028975999920045738----899999999978997899999 Q gi|254780309|r 11 VSKHVAGLKILLIDDVYTTGA----TAKCAAIALKKAGAMTVSILT 52 (59) Q Consensus 11 ~~~~i~gk~vliVDDiitTG~----T~~~~~~~L~~~ga~~V~~~~ 52 (59) ...+++|++|+||-.....-. -+--.+..+++.||++|..+. T Consensus 50 i~~~vrg~dV~iiqs~~~~~nd~lmELll~idAlr~~gA~rItlVi 95 (175) T 1dku_A 50 IEESIRGCDCYIIQSTSDPVNEHIMELLIMVDALKRASAKTINIVI 95 (175) T ss_dssp ECSCCTTCEEEEECCCCSSHHHHHHHHHHHHHHHHHTTCSEEEEEE T ss_pred ECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEC T ss_conf 6787789859999678998015499999888777634553478833 No 68 >>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} (A:) Probab=34.78 E-value=18 Score=18.18 Aligned_cols=31 Identities=16% Similarity=0.143 Sum_probs=17.8 Q ss_pred CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEE Q ss_conf 2897599992004573889999999997899789 Q gi|254780309|r 15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTV 48 (59) Q Consensus 15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V 48 (59) +++|+||||||--..... +.+.|.+.|.... T Consensus 1 l~~~rvLiVdD~~~~~~~---l~~~L~~~G~~v~ 31 (127) T 3i42_A 1 MSLQQALIVEDYQAAAET---FKELLEMLGFQAD 31 (127) T ss_dssp -CCEEEEEECSCHHHHHH---HHHHHHHTTEEEE T ss_pred CCCCEEEEEECCHHHHHH---HHHHHHHCCCEEE T ss_conf 998889999578999999---9999998799999 No 69 >>2pkp_A 3-isopropylmalate dehydratase small subunit 1; beta barrel, amino-acid biosynthesis, leucine biosynthesis; 2.10A {Methanocaldococcus jannaschii DSM2661} (A:) Probab=32.75 E-value=20 Score=17.93 Aligned_cols=48 Identities=23% Similarity=0.362 Sum_probs=40.7 Q ss_pred CCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE Q ss_conf 510210028975999920045738899999999978997899999983 Q gi|254780309|r 8 PQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59) Q Consensus 8 ~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59) .++.....++-+|++..+-+=+|++=.+++..++..|.+.|..-.++| T Consensus 42 ~~~~~~~~~~~~iiVaG~nfG~GSSRE~A~~al~~~Gi~aVIA~sFa~ 89 (170) T 2pkp_A 42 DENFPKKVKEGDVIVAGENFGCGSSREQAVIAIKYCGIKAVIAKSFAR 89 (170) T ss_dssp CTTHHHHCCTTCEEEECTTBTBSSCCHHHHHHHHTTTCCEEEESCBCH T ss_pred CCCCCHHCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEEHHH T ss_conf 731100023456798413224688764899999961256899833567 No 70 >>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A (A:) Probab=31.95 E-value=44 Score=16.11 Aligned_cols=44 Identities=16% Similarity=0.180 Sum_probs=36.4 Q ss_pred C-CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECC Q ss_conf 2-8975999920045738899999999978997899999983068 Q gi|254780309|r 15 V-AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLK 58 (59) Q Consensus 15 i-~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~~ 58 (59) | .|-.|+=|++.-..|.|..++.+.|++........+.+.|..+ T Consensus 58 l~~GD~Il~INg~~~~~~~~~~~~~~l~~~~~~~~v~l~v~r~~~ 102 (111) T 2koj_A 58 LKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKMEGTVSLLVFRQEE 102 (111) T ss_dssp SCTTCEEEEETTEECTTSCHHHHHHHHHHCCCSSEEEEEEEECCC T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHCCCCCCEEEEEEEECCC T ss_conf 877889999999995699899999999729999989999983898 No 71 >>3ca8_A Protein YDCF; two domains, alpha/beta fold, helix bundle, structural genomics, structure 2 function project, S2F, unknown function; 1.80A {Escherichia coli K12} (A:32-182) Probab=30.14 E-value=48 Score=15.93 Aligned_cols=39 Identities=23% Similarity=0.313 Sum_probs=33.6 Q ss_pred CCCCCEEEEEEECCCCCHHHHHHHHHHHHC--CCCEEEEEE Q ss_conf 028975999920045738899999999978--997899999 Q gi|254780309|r 14 HVAGLKILLIDDVYTTGATAKCAAIALKKA--GAMTVSILT 52 (59) Q Consensus 14 ~i~gk~vliVDDiitTG~T~~~~~~~L~~~--ga~~V~~~~ 52 (59) .+....|++-+...+|...+..+.+.|++. +.+++.+++ T Consensus 80 Gvp~~~I~~e~~s~~T~eNa~~~~~~l~~~~~~~~~iilVT 120 (151) T 3ca8_A 80 HIPHEKIWIEDQSTNCGENARFSIALLNQAVERVHTAIVVQ 120 (151) T ss_dssp CCCGGGEEEECCCCSHHHHHHHHHHHHHTCSSCCSCEEEEC T ss_pred CCCHHHEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEC T ss_conf 99899955278877889999999999996399988799989 No 72 >>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} (A:) Probab=28.41 E-value=51 Score=15.76 Aligned_cols=31 Identities=23% Similarity=0.263 Sum_probs=19.7 Q ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEE Q ss_conf 9759999200457388999999999789978999 Q gi|254780309|r 17 GLKILLIDDVYTTGATAKCAAIALKKAGAMTVSI 50 (59) Q Consensus 17 gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~ 50 (59) |++||+|||--. ....+...|.+.|...+.. T Consensus 2 ~~riLiVDD~~~---~~~~l~~~L~~~g~~v~~~ 32 (120) T 1tmy_A 2 GKRVLIVDDAAF---MRMMLKDIITKAGYEVAGE 32 (120) T ss_dssp CCEEEEECSCHH---HHHHHHHHHHHTTCEEEEE T ss_pred CCCEEEEECCHH---HHHHHHHHHHHCCCEEEEE T ss_conf 986999939999---9999999999879989999 No 73 >>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} (A:1-142,A:271-284) Probab=28.32 E-value=52 Score=15.75 Aligned_cols=42 Identities=10% Similarity=0.204 Sum_probs=32.1 Q ss_pred HHHCCCCCEEEEEEECCCCCHHHHH---HHHHHHHCCCCEEEEEE Q ss_conf 2100289759999200457388999---99999978997899999 Q gi|254780309|r 11 VSKHVAGLKILLIDDVYTTGATAKC---AAIALKKAGAMTVSILT 52 (59) Q Consensus 11 ~~~~i~gk~vliVDDiitTG~T~~~---~~~~L~~~ga~~V~~~~ 52 (59) ....+.|++++++--....--++.+ .+..++++||+++.... T Consensus 41 i~~~v~g~~V~ii~s~~~~~d~l~eLlll~~alr~~ga~~i~lVi 85 (156) T 1u9y_A 41 IVDEINDDEAVIINTQKNQNDAIVETILLCDALRDEGVKKITLVA 85 (156) T ss_dssp ECSCCCSSEEEEECCCSSHHHHHHHHHHHHHHHHTTTCCEEEEEC T ss_pred ECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEE T ss_conf 577778997999907887542378899999999985646632112 No 74 >>1s8n_A Putative antiterminator; structural genomics, transcriptional antiterminator, two component system, PSI; 1.48A {Mycobacterium tuberculosis H37RV} (A:1-143) Probab=28.29 E-value=52 Score=15.75 Aligned_cols=36 Identities=17% Similarity=0.109 Sum_probs=25.0 Q ss_pred HCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 002897599992004573889999999997899789999 Q gi|254780309|r 13 KHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSIL 51 (59) Q Consensus 13 ~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~ 51 (59) ....+++||||||--. ......+.|.+.|...+..+ T Consensus 9 ~~~~~~~VLIVDD~~~---~r~~l~~~L~~~g~~vv~~a 44 (143) T 1s8n_A 9 DAAVPRRVLIAEDEAL---IRMDLAEMLREEGYEIVGEA 44 (143) T ss_dssp --CCCCEEEEECSSHH---HHHHHHHHHHHTTCEEEEEE T ss_pred CCCCCCEEEEECCCHH---HHHHHHHHHHHCCCEEEEEE T ss_conf 8887888999829899---99999999998699799998 No 75 >>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12} (A:) Probab=27.81 E-value=38 Score=16.46 Aligned_cols=34 Identities=24% Similarity=0.283 Sum_probs=23.1 Q ss_pred HCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEE Q ss_conf 0028975999920045738899999999978997899 Q gi|254780309|r 13 KHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVS 49 (59) Q Consensus 13 ~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~ 49 (59) ..++|++||+|||--..-. ...+.|.+.|..... T Consensus 3 ~~l~~~~vLiVdd~~~~~~---~~~~~L~~~g~~v~~ 36 (130) T 3eod_A 3 QPLVGKQILIVEDEQVFRS---LLDSWFSSLGATTVL 36 (130) T ss_dssp CTTTTCEEEEECSCHHHHH---HHHHHHHHTTCEEEE T ss_pred CCCCCCEEEEEECCHHHHH---HHHHHHHHCCCEEEE T ss_conf 9888998999949899999---999999987999999 No 76 >>1nh8_A ATP phosphoribosyltransferase; prtase, de novo His biosynthesis, PRPP, structural genomics, PSI, protein structure initiative; HET: AMP HIS; 1.80A {Mycobacterium tuberculosis H37RV} (A:107-199) Probab=27.47 E-value=26 Score=17.39 Aligned_cols=20 Identities=25% Similarity=0.348 Sum_probs=13.8 Q ss_pred EEECCCCCHHHHHHHHHHHHCCCCEEE Q ss_conf 920045738899999999978997899 Q gi|254780309|r 23 IDDVYTTGATAKCAAIALKKAGAMTVS 49 (59) Q Consensus 23 VDDiitTG~T~~~~~~~L~~~ga~~V~ 49 (59) |=|++.||+||. ++|-+.+. T Consensus 66 IvDiv~TG~TLr-------~NgL~~i~ 85 (93) T 1nh8_A 66 IADVVGSGRTLS-------QHDLVAFG 85 (93) T ss_dssp EEEEESSSHHHH-------HTTEEEEE T ss_pred EEEEECCHHHHH-------HCCCEECC T ss_conf 888737778999-------87998875 No 77 >>2h06_A Ribose-phosphate pyrophosphokinase I; PRS1, PRPP synthetase 1, phosphoribosyl pyrophosphate synthetase 1, transferase; 2.20A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h07_A 2h08_A (A:1-147,A:293-326) Probab=26.50 E-value=56 Score=15.57 Aligned_cols=42 Identities=17% Similarity=0.116 Sum_probs=32.4 Q ss_pred HHHCCCCCEEEEEEECCCCCH----HHHHHHHHHHHCCCCEEEEEE Q ss_conf 210028975999920045738----899999999978997899999 Q gi|254780309|r 11 VSKHVAGLKILLIDDVYTTGA----TAKCAAIALKKAGAMTVSILT 52 (59) Q Consensus 11 ~~~~i~gk~vliVDDiitTG~----T~~~~~~~L~~~ga~~V~~~~ 52 (59) ....+.|++|++|-+....=. -+--.+..+++.|+++|.++. T Consensus 44 i~~~vrg~dV~iiqs~~~~~nd~lmELlllidAlr~~gA~~ItlVi 89 (181) T 2h06_A 44 IGESVRGEDVYIVQSGCGEINDNLMELLIMINACKIASASRVTAVI 89 (181) T ss_dssp ECSCCBTCEEEEECCCCSCHHHHHHHHHHHHHHHHTTTBSEEEEEE T ss_pred ECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEC T ss_conf 7887789958999589998306799999999998760665404741 No 78 >>1h3d_A ATP-phosphoribosyltransferase; hisitidine biosynthesis, glycosyltransferase; HET: AMP TLA; 2.7A {Escherichia coli} (A:101-193) Probab=26.14 E-value=28 Score=17.18 Aligned_cols=13 Identities=46% Similarity=0.570 Sum_probs=10.1 Q ss_pred EEECCCCCHHHHH Q ss_conf 9200457388999 Q gi|254780309|r 23 IDDVYTTGATAKC 35 (59) Q Consensus 23 VDDiitTG~T~~~ 35 (59) |=|+..||+||.+ T Consensus 67 IvDiv~TGtTLr~ 79 (93) T 1h3d_A 67 ICDLVSTGATLEA 79 (93) T ss_dssp EEEEESSCHHHHH T ss_pred EEEECCCHHHHHH T ss_conf 2631356789998 No 79 >>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} (A:1-131) Probab=26.12 E-value=57 Score=15.53 Aligned_cols=33 Identities=18% Similarity=0.237 Sum_probs=22.6 Q ss_pred HCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEE Q ss_conf 002897599992004573889999999997899789 Q gi|254780309|r 13 KHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTV 48 (59) Q Consensus 13 ~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V 48 (59) ..+.+++||||||-- .......+.|.+.|.... T Consensus 3 ~~~~~~~ILiVdDd~---~~~~~l~~~L~~~g~~v~ 35 (131) T 1ys7_A 3 TGVTSPRVLVVDDDS---DVLASLERGLRLSGFEVA 35 (131) T ss_dssp ----CCEEEEECSCH---HHHHHHHHHHHHTTCEEE T ss_pred CCCCCCEEEEEECCH---HHHHHHHHHHHHCCCEEE T ss_conf 899998799997999---999999999997899999 No 80 >>3kht_A Response regulator; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.10A {Hahella chejuensis kctc 2396} (A:) Probab=24.94 E-value=39 Score=16.42 Aligned_cols=30 Identities=10% Similarity=0.122 Sum_probs=20.6 Q ss_pred CCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCC Q ss_conf 028975999920045738899999999978997 Q gi|254780309|r 14 HVAGLKILLIDDVYTTGATAKCAAIALKKAGAM 46 (59) Q Consensus 14 ~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~ 46 (59) .+++++||||||--+.. ....+.|++.|.. T Consensus 2 sl~~~~iLiVdD~~~~~---~~l~~~L~~~g~~ 31 (144) T 3kht_A 2 SLRSKRVLVVEDNPDDI---ALIRRVLDRKDIH 31 (144) T ss_dssp ---CEEEEEECCCHHHH---HHHHHHHHHTTCC T ss_pred CCCCCEEEEEECCHHHH---HHHHHHHHHCCCC T ss_conf 98898999995899999---9999999968998 No 81 >>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} (A:) Probab=24.84 E-value=36 Score=16.59 Aligned_cols=32 Identities=25% Similarity=0.229 Sum_probs=19.2 Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHCCCC-EEEE Q ss_conf 8975999920045738899999999978997-8999 Q gi|254780309|r 16 AGLKILLIDDVYTTGATAKCAAIALKKAGAM-TVSI 50 (59) Q Consensus 16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~-~V~~ 50 (59) .||.||||||--. ......+.|.+.|.. .|.. T Consensus 1 a~~~ILiVddd~~---~~~~l~~~L~~~g~~~~v~~ 33 (140) T 1k68_A 1 AHKKIFLVEDNKA---DIRLIQEALANSTVPHEVVT 33 (140) T ss_dssp CCCEEEEECCCHH---HHHHHHHHHHTCSSCCEEEE T ss_pred CCCCEEEEECCHH---HHHHHHHHHHHCCCCCEEEE T ss_conf 9982999979999---99999999996799818999 No 82 >>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens} (A:) Probab=24.77 E-value=60 Score=15.39 Aligned_cols=43 Identities=14% Similarity=0.208 Sum_probs=34.2 Q ss_pred CC-CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE Q ss_conf 02-89759999200457388999999999789978999999830 Q gi|254780309|r 14 HV-AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59) Q Consensus 14 ~i-~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59) .+ .|-.|+=|++.-.+|.++.++.+.|++........+.+.|- T Consensus 55 ~L~~GD~Il~Vng~~v~~~~~~ev~~~l~~~~~~~~i~l~v~r~ 98 (101) T 2yt7_A 55 ALSIGDRLTAINGTSLVGLPLAACQAAVRETKSQTSVTLSIVHC 98 (101) T ss_dssp SCCTTCEEEEESSCBCTTSCHHHHHHHHHHTTTSSEEEEEECCC T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCCCEEEEEEECC T ss_conf 99644684889999889998999999997699998899999828 No 83 >>1ve4_A ATP phosphoribosyltransferase; riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.20A {Thermus thermophilus} (A:92-177) Probab=24.41 E-value=42 Score=16.22 Aligned_cols=22 Identities=45% Similarity=0.641 Sum_probs=14.4 Q ss_pred EEECCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 92004573889999999997899789999 Q gi|254780309|r 23 IDDVYTTGATAKCAAIALKKAGAMTVSIL 51 (59) Q Consensus 23 VDDiitTG~T~~~~~~~L~~~ga~~V~~~ 51 (59) |=|+..||.||. ++|-+.+..+ T Consensus 60 IvDiv~TG~TLr-------~NgL~~i~~I 81 (86) T 1ve4_A 60 VVDVVQTGATLR-------AAGLVEVEVL 81 (86) T ss_dssp EEEEESSSHHHH-------HTTCEEEEEE T ss_pred EEEEECCHHHHH-------HCCCEEEEEE T ss_conf 665302688999-------8699643378 No 84 >>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} (A:118-254) Probab=23.21 E-value=61 Score=15.36 Aligned_cols=35 Identities=20% Similarity=0.172 Sum_probs=23.2 Q ss_pred HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEE Q ss_conf 10028975999920045738899999999978997899 Q gi|254780309|r 12 SKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVS 49 (59) Q Consensus 12 ~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~ 49 (59) .+..+++.||||||--. ......+.|...|..... T Consensus 7 ~~~~~~~~iLiVdd~~~---~~~~l~~~L~~~g~~v~~ 41 (137) T 2ayx_A 7 VSDNDDMMILVVDDHPI---NRRLLADQLGSLGYQCKT 41 (137) T ss_dssp CCCCCCCEEEEEESSHH---HHHHHHHHHHHHTSEEEE T ss_pred CCCCCCCEEEEECCCHH---HHHHHHHHHHHCCCEEEE T ss_conf 67899988999919899---999999999987999999 No 85 >>1c96_A Mitochondrial aconitase; lyase, tricarboxylic acid cycle, iron-sulfur, mitochondrion, transit peptide, 4Fe-4S, 3D-structure; HET: FLC; 1.81A {Bos taurus} (A:535-753) Probab=23.14 E-value=20 Score=18.01 Aligned_cols=42 Identities=19% Similarity=0.313 Sum_probs=36.6 Q ss_pred CCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE Q ss_conf 028975999920045738899999999978997899999983 Q gi|254780309|r 14 HVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59) Q Consensus 14 ~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59) +.++..||+..+-+=+|++=.+++..++..|.+.|..-.+|| T Consensus 90 ~~~~~~IiVaG~NfG~GSSRE~Aa~al~~~Gi~aVIA~SFar 131 (219) T 1c96_A 90 QHGIRWVVIGDENYGEGASREHSALEPRHLGGRAIITKSFAR 131 (219) T ss_dssp HHTCCEEEECCSSBTBSCCCTHHHHHHHHTTEEEEEESCBCH T ss_pred HCCCCEEEEECCCCCCCCHHHHHHHHHHHHCEEEEEEHHHHH T ss_conf 759987999378679855599999878873889999846999 No 86 >>1z7m_E ATP phosphoribosyltransferase; ATP-PRT, histidine biosynthesis, hiszg, allosteric, evolution; 2.90A {Lactococcus lactis} (E:91-177) Probab=23.02 E-value=28 Score=17.21 Aligned_cols=21 Identities=29% Similarity=0.347 Sum_probs=13.3 Q ss_pred EEECCCCCHHHHHHHHHHHHCCCCEEEE Q ss_conf 9200457388999999999789978999 Q gi|254780309|r 23 IDDVYTTGATAKCAAIALKKAGAMTVSI 50 (59) Q Consensus 23 VDDiitTG~T~~~~~~~L~~~ga~~V~~ 50 (59) |=|+..||.||. ++|-+.+.. T Consensus 63 IvDiv~TG~TLk-------~NgL~~i~~ 83 (87) T 1z7m_E 63 IVDIVETGNTLS-------ANGLEVIEK 83 (87) T ss_dssp EEEEESSSHHHH-------TTTCEEEEE T ss_pred EEEECCCHHHHH-------HCCCEECCE T ss_conf 386504689999-------878998513 No 87 >>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} (A:) Probab=22.01 E-value=47 Score=15.97 Aligned_cols=40 Identities=25% Similarity=0.143 Sum_probs=28.3 Q ss_pred CCEEEEEEECCCCCHHHH----HHHHHHHHCCCCEEEEEEEEEEC Q ss_conf 975999920045738899----99999997899789999998306 Q gi|254780309|r 17 GLKILLIDDVYTTGATAK----CAAIALKKAGAMTVSILTFSRSL 57 (59) Q Consensus 17 gk~vliVDDiitTG~T~~----~~~~~L~~~ga~~V~~~~lar~~ 57 (59) |+.+ =+|=-++||.-+. +.-++++.+||+.|.+---|++- T Consensus 14 Gq~~-e~~~~VsT~~ELer~L~ELe~~l~r~GAr~V~ItIsA~~~ 57 (106) T 1qys_A 14 GKNF-DYTYTVTTESELQKVLNELXDYIKKQGAKRVRISITARTK 57 (106) T ss_dssp SCEE-EEEEEESSSSHHHHHHHHHHHHHHHHCCSEEEEEEECSSH T ss_pred CCEE-EEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCH T ss_conf 8188-8999980548999999999999987176458999996667 No 88 >>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixation regulation; HET: 15P; 1.60A {Rhizobium meliloti} (A:) Probab=21.95 E-value=69 Score=15.08 Aligned_cols=31 Identities=19% Similarity=0.241 Sum_probs=19.3 Q ss_pred CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEE Q ss_conf 2897599992004573889999999997899789 Q gi|254780309|r 15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTV 48 (59) Q Consensus 15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V 48 (59) +++++||||||-- .........|...|.... T Consensus 1 m~~~~ILiVDD~~---~~~~~l~~~L~~~g~~v~ 31 (126) T 1dbw_A 1 MQDYTVHIVDDEE---PVRKSLAFMLTMNGFAVK 31 (126) T ss_dssp CCCCEEEEEESSH---HHHHHHHHHHHHTTCEEE T ss_pred CCCCEEEEEECCH---HHHHHHHHHHHHCCCEEE T ss_conf 9989899997999---999999999998799999 No 89 >>2q9v_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; Cys Ser mutant, structural genomics consortium, SGC, transferase; 2.00A {Homo sapiens} (A:) Probab=21.81 E-value=50 Score=15.80 Aligned_cols=37 Identities=16% Similarity=0.214 Sum_probs=29.5 Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEE Q ss_conf 8975999920045738899999999978997899999 Q gi|254780309|r 16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILT 52 (59) Q Consensus 16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~ 52 (59) .|-.++=|+++-..|.|..++.+.|++........+. T Consensus 48 ~GD~Il~VNg~~v~~~t~~ev~~~l~~~~~~~~~~l~ 84 (90) T 2q9v_A 48 SGDELISVDGTPVIGKSHQLVVQLMQQAAKQGHVNLT 84 (90) T ss_dssp TTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEE T ss_pred CCCEEEEECCEECCCCCHHHHHHHHHHCCCCCEEEEE T ss_conf 5679999999998899899999999848999889999 No 90 >>2wbn_A G2P, terminase large subunit; large terminase, nuclease, viral protein, DNA packaging; 1.90A {Bacillus phage SPP1} PDB: 2wc9_A (A:) Probab=21.31 E-value=71 Score=15.00 Aligned_cols=35 Identities=20% Similarity=0.167 Sum_probs=29.1 Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEE Q ss_conf 89759999200457388999999999789978999 Q gi|254780309|r 16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSI 50 (59) Q Consensus 16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~ 50 (59) .++.+.++|.++.+|.|..+.++.|++.+.....+ T Consensus 74 ~~~~~~i~~e~~~~~~~~~~~a~~l~~~~~~~~~~ 108 (212) T 2wbn_A 74 RKNRIYAIDELVDHKVSLKRTADFVRKNKYESARI 108 (212) T ss_dssp TTTEEEEEEEEEESSCCHHHHHHHHHHTTCTTSCE T ss_pred CCCEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCC T ss_conf 89989999860215889999999999745687753 No 91 >>2vd3_A ATP phosphoribosyltransferase; metal-binding, glycosyltransferase, HISG, cytoplasm, histidine, magnesium; HET: HIS; 2.45A {Methanobacterium thermoautotrophicum} (A:214-290) Probab=21.02 E-value=72 Score=14.97 Aligned_cols=32 Identities=16% Similarity=0.145 Sum_probs=25.9 Q ss_pred CCCCHHHHHHHHHHHHCCCCEEEEEEEEEECC Q ss_conf 45738899999999978997899999983068 Q gi|254780309|r 27 YTTGATAKCAAIALKKAGAMTVSILTFSRSLK 58 (59) Q Consensus 27 itTG~T~~~~~~~L~~~ga~~V~~~~lar~~~ 58 (59) +-....+......|++.||+.|.+.-+-|.+| T Consensus 45 vV~~~~v~~~i~~Lk~~GA~~Ilv~~Iek~ip 76 (77) T 2vd3_A 45 VVDEKEVFNLINRLKAVGARDILVVPIERIIP 76 (77) T ss_dssp EEETTTHHHHHHHHHTTTCEEEEEEECSCCCC T ss_pred EECHHHHHHHHHHHHHCCCCEEEEECCEECCC T ss_conf 97599999999999984998589964500279 No 92 >>3g4d_A (+)-delta-cadinene synthase isozyme XC1; cyclase, lyase, magnesium, metal-binding; 2.40A {Gossypium arboreum} PDB: 3g4f_A* (A:287-436) Probab=20.91 E-value=12 Score=19.11 Aligned_cols=19 Identities=26% Similarity=0.223 Sum_probs=15.8 Q ss_pred EEEEECCCCCHHHHHHHHH Q ss_conf 9992004573889999999 Q gi|254780309|r 21 LLIDDVYTTGATAKCAAIA 39 (59) Q Consensus 21 liVDDiitTG~T~~~~~~~ 39 (59) -++||++|+.+|+.++... T Consensus 18 t~lDD~yD~ygT~eEl~~f 36 (150) T 3g4d_A 18 SIVDDTYDSYATYEELIPY 36 (150) T ss_dssp HHHHHHHTSSCCHHHHHHH T ss_pred HHHHHHHCCCCCHHHHHHH T ss_conf 9998874255779999999 No 93 >>2jba_A Phosphate regulon transcriptional regulatory protein PHOB; transcription factor, sensory transduction, phosphate regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A (A:) Probab=20.70 E-value=59 Score=15.43 Aligned_cols=30 Identities=20% Similarity=0.334 Sum_probs=18.5 Q ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEE Q ss_conf 975999920045738899999999978997899 Q gi|254780309|r 17 GLKILLIDDVYTTGATAKCAAIALKKAGAMTVS 49 (59) Q Consensus 17 gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~ 49 (59) +|+||||||--.... ...+.|.+.|..... T Consensus 2 ~~rILiVdD~~~~~~---~l~~~L~~~g~~v~~ 31 (127) T 2jba_A 2 ARRILVVEDEAPIRE---MVCFVLEQNGFQPVE 31 (127) T ss_dssp CCEEEEECSCHHHHH---HHHHHHHHTTCEEEE T ss_pred CCCEEEEECCHHHHH---HHHHHHHHCCCEEEE T ss_conf 998999979999999---999999987999999 No 94 >>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} (A:) Probab=20.53 E-value=52 Score=15.73 Aligned_cols=37 Identities=30% Similarity=0.234 Sum_probs=27.0 Q ss_pred EEEEECCCCCHHHH----HHHHHHHHCCCCEEEEEEEEEEC Q ss_conf 99920045738899----99999997899789999998306 Q gi|254780309|r 21 LLIDDVYTTGATAK----CAAIALKKAGAMTVSILTFSRSL 57 (59) Q Consensus 21 liVDDiitTG~T~~----~~~~~L~~~ga~~V~~~~lar~~ 57 (59) +=+|=-++||.-+. +.-++++.+||+.|.+---|++- T Consensus 19 ~e~~~~VsT~~ELer~L~EL~~~l~r~GAr~V~ItIsA~~~ 59 (96) T 2jvf_A 19 IEIDIRVSTGKELERALQELEKALARAGARNVQITISAEND 59 (96) T ss_dssp EEEEEECCSSSHHHHHHHHHHHHHHHHTCSEEEEEEECSSH T ss_pred EEEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCH T ss_conf 88999981438999999999999986176448999996566 No 95 >>2vd3_A ATP phosphoribosyltransferase; metal-binding, glycosyltransferase, HISG, cytoplasm, histidine, magnesium; HET: HIS; 2.45A {Methanobacterium thermoautotrophicum} (A:91-184) Probab=20.24 E-value=57 Score=15.50 Aligned_cols=13 Identities=38% Similarity=0.588 Sum_probs=10.1 Q ss_pred EEECCCCCHHHHH Q ss_conf 9200457388999 Q gi|254780309|r 23 IDDVYTTGATAKC 35 (59) Q Consensus 23 VDDiitTG~T~~~ 35 (59) |=|+..||+|+.+ T Consensus 68 IvDiv~TG~TLr~ 80 (94) T 2vd3_A 68 ITDLSSTGTTLRM 80 (94) T ss_dssp EEEEESSTHHHHH T ss_pred EEEEECCHHHHHH T ss_conf 8988457088997 Done!