Query gi|254780309|ref|YP_003064722.1| comF family protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 59
No_of_seqs 104 out of 2972
Neff 6.1
Searched_HMMs 33803
Date Wed Jun 1 12:06:57 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780309.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >2ji4_A Phosphoribosyl pyropho 99.3 7E-12 2.1E-16 85.3 7.0 52 7-58 87-138 (176)
2 >1vch_A Phosphoribosyltransfer 99.3 1.6E-11 4.6E-16 83.4 7.3 54 5-58 108-161 (175)
3 >1ao0_A Glutamine phosphoribos 99.1 6.4E-11 1.9E-15 80.1 5.2 48 11-58 91-138 (218)
4 >1tc1_A Protein (hypoxanthine 99.1 1.3E-10 3.9E-15 78.4 6.8 49 9-57 81-129 (146)
5 >2jbh_A HHGP; glycosyltransfer 99.1 3.2E-10 9.3E-15 76.3 7.6 50 7-56 124-173 (225)
6 >1pzm_A HGPRT, hypoxanthine-gu 99.1 2.3E-10 6.8E-15 77.1 6.6 48 10-57 81-128 (146)
7 >1w30_A PYRR bifunctional prot 99.1 2E-10 6E-15 77.4 6.1 48 11-58 106-153 (201)
8 >1hgx_A HGXPRTASE, hypoxanthin 99.1 3.9E-10 1.2E-14 75.8 7.0 51 8-58 69-119 (138)
9 >3hvu_A Hypoxanthine phosphori 99.1 4.6E-10 1.4E-14 75.4 7.2 51 6-56 68-118 (137)
10 >2geb_A Hypoxanthine-guanine p 99.0 5E-10 1.5E-14 75.3 6.7 50 7-56 69-118 (137)
11 >1g2q_A Adenine phosphoribosyl 99.0 7.7E-10 2.3E-14 74.2 7.7 47 10-56 115-161 (187)
12 >1zn8_A APRT, adenine phosphor 99.0 7.4E-10 2.2E-14 74.3 7.0 49 9-57 112-160 (180)
13 >1ecf_A Glutamine phosphoribos 99.0 3.5E-10 1E-14 76.1 5.0 46 12-57 97-142 (202)
14 >1a3c_A PYRR, pyrimidine opero 99.0 7.5E-10 2.2E-14 74.3 6.5 54 4-57 85-138 (181)
15 >1i5e_A Uracil phosphoribosylt 99.0 4.3E-10 1.3E-14 75.6 5.1 51 6-56 52-102 (148)
16 >1yfz_A Hypoxanthine-guanine p 99.0 9.6E-10 2.9E-14 73.7 6.7 50 8-57 71-120 (138)
17 >1z7g_A HGPRT, HGPRTASE, hypox 99.0 9.4E-10 2.8E-14 73.8 6.4 48 9-56 118-165 (217)
18 >1j7j_A HPRT, hypoxanthine pho 99.0 8E-10 2.4E-14 74.2 5.9 47 10-56 74-120 (139)
19 >1y0b_A Xanthine phosphoribosy 99.0 1.5E-09 4.5E-14 72.6 7.2 47 10-56 113-159 (197)
20 >1vdm_A Purine phosphoribosylt 99.0 1.2E-09 3.7E-14 73.1 6.6 48 9-56 75-122 (153)
21 >1cjb_A Protein (hypoxanthine- 99.0 1.5E-09 4.4E-14 72.7 6.8 49 9-57 129-177 (231)
22 >1o57_A PUR operon repressor; 98.9 1.6E-09 4.6E-14 72.6 6.2 47 10-56 113-159 (215)
23 >1wd5_A Hypothetical protein T 98.9 1.7E-09 5E-14 72.4 5.9 46 10-55 113-158 (208)
24 >2dy0_A APRT, adenine phosphor 98.9 3.8E-09 1.1E-13 70.5 7.2 47 10-56 119-165 (190)
25 >1l1q_A Adenine phosphoribosyl 98.9 1.2E-09 3.4E-14 73.3 4.4 44 12-55 112-155 (186)
26 >1qb7_A APRT, adenine phosphor 98.9 2.6E-09 7.7E-14 71.4 6.0 45 12-56 133-177 (215)
27 >1fsg_A HGPRTASE, hypoxanthine 98.9 5.5E-09 1.6E-13 69.6 7.6 48 9-56 134-181 (233)
28 >1ufr_A TT1027, PYR mRNA-bindi 98.9 3.2E-09 9.4E-14 70.9 6.4 45 10-54 79-123 (145)
29 >1lh0_A OMP synthase; loop clo 98.9 2.2E-09 6.6E-14 71.7 5.4 46 11-56 72-117 (145)
30 >2ps1_A Orotate phosphoribosyl 98.9 3.3E-09 9.8E-14 70.8 6.2 45 12-56 97-141 (184)
31 >2ywu_A Hypoxanthine-guanine p 98.9 3.7E-09 1.1E-13 70.6 6.1 47 10-56 88-134 (181)
32 >2wns_A Orotate phosphoribosyl 98.9 3.9E-09 1.1E-13 70.4 5.9 45 13-57 69-113 (133)
33 >2ehj_A Uracil phosphoribosylt 98.9 5E-09 1.5E-13 69.9 6.2 50 8-57 114-163 (208)
34 >2p1z_A Phosphoribosyltransfer 98.9 3.8E-09 1.1E-13 70.5 5.6 47 10-56 107-153 (180)
35 >2yzk_A OPRT, oprtase, orotate 98.8 7.4E-09 2.2E-13 68.9 6.9 48 10-57 75-122 (154)
36 >1o5o_A Uracil phosphoribosylt 98.8 4.6E-09 1.3E-13 70.1 5.0 50 8-57 127-176 (221)
37 >1u9y_A RPPK;, ribose-phosphat 98.8 7.4E-09 2.2E-13 68.9 5.8 45 11-55 57-101 (128)
38 >1v9s_A Uracil phosphoribosylt 98.8 3.8E-09 1.1E-13 70.5 4.3 46 11-56 117-162 (208)
39 >3dez_A OPRT, oprtase, orotate 98.8 9.1E-09 2.7E-13 68.4 5.5 40 12-51 45-84 (84)
40 >2h06_A Ribose-phosphate pyrop 98.8 1E-08 3E-13 68.2 5.2 46 12-57 61-106 (145)
41 >2jky_A Hypoxanthine-guanine p 98.7 2.4E-10 7E-15 77.0 -3.4 46 10-55 86-131 (176)
42 >2aee_A OPRT, oprtase, orotate 98.7 1.9E-08 5.5E-13 66.8 6.2 44 13-56 46-89 (107)
43 >2e55_A Uracil phosphoribosylt 98.7 2.1E-08 6.3E-13 66.5 6.0 46 10-55 114-159 (208)
44 >1xtt_A Probable uracil phosph 98.7 1.7E-08 5.2E-13 66.9 5.2 43 13-55 129-171 (216)
45 >1dqn_A Guanine phosphoribosyl 98.7 2.7E-09 7.9E-14 71.3 0.4 44 10-53 52-95 (116)
46 >1nul_A XPRT, xanthine-guanine 98.7 1.6E-09 4.9E-14 72.5 -0.7 48 12-59 68-115 (123)
47 >3dah_A Ribose-phosphate pyrop 98.7 4.8E-08 1.4E-12 64.6 6.7 47 12-58 59-105 (143)
48 >1bd3_D Uprtase, uracil phosph 98.7 1.5E-08 4.4E-13 67.3 3.4 49 8-56 147-195 (243)
49 >1dku_A Protein (phosphoribosy 98.7 3.1E-08 9.3E-13 65.5 5.1 43 13-55 60-102 (142)
50 >3dmp_A Uracil phosphoribosylt 98.6 1.1E-08 3.4E-13 67.9 2.7 48 9-56 121-168 (217)
51 >3fbt_A Chorismate mutase and 79.6 3.8 0.00011 21.8 4.9 34 15-52 1-34 (117)
52 >2vdc_G Glutamate synthase [NA 73.9 7.7 0.00023 20.2 5.6 36 14-53 45-80 (118)
53 >3don_A Shikimate dehydrogenas 63.0 8.9 0.00026 19.9 3.6 38 11-52 12-49 (151)
54 >1npy_A Hypothetical shikimate 61.1 14 0.00042 18.8 4.4 37 11-51 12-48 (152)
55 >2egg_A AROE, shikimate 5-dehy 59.2 16 0.00046 18.6 5.3 33 15-51 2-34 (125)
56 >1dcf_A ETR1 protein; beta-alp 53.9 19 0.00057 18.1 4.6 34 13-49 3-36 (136)
57 >3dah_A Ribose-phosphate pyrop 53.1 20 0.00059 18.0 5.1 42 11-52 48-93 (176)
58 >2o7s_A DHQ-SDH, bifunctional 49.5 19 0.00056 18.1 3.4 43 4-50 18-60 (190)
59 >3c97_A Signal transduction hi 46.2 26 0.00076 17.4 3.8 35 12-49 5-39 (65)
60 >2j48_A Two-component sensor k 43.4 29 0.00085 17.1 4.6 31 17-50 1-31 (119)
61 >1v7l_A 3-isopropylmalate dehy 42.8 5.9 0.00017 20.8 -0.0 48 8-55 42-89 (163)
62 >3h5i_A Response regulator/sen 42.5 30 0.00087 17.1 4.4 29 15-46 3-31 (140)
63 >2hcu_A 3-isopropylmalate dehy 39.9 14 0.00041 18.8 1.5 42 14-55 82-123 (213)
64 >3gge_A PDZ domain-containing 39.7 33 0.00097 16.8 4.8 42 16-57 49-90 (95)
65 >1nvt_A Shikimate 5'-dehydroge 38.2 33 0.00097 16.8 3.2 38 11-52 12-49 (160)
66 >2ji4_A Phosphoribosyl pyropho 36.1 38 0.0011 16.5 5.1 41 11-51 73-117 (203)
67 >1dku_A Protein (phosphoribosy 34.9 39 0.0012 16.4 5.3 42 11-52 50-95 (175)
68 >3i42_A Response regulator rec 34.8 18 0.00054 18.2 1.5 31 15-48 1-31 (127)
69 >2pkp_A 3-isopropylmalate dehy 32.8 20 0.0006 17.9 1.4 48 8-55 42-89 (170)
70 >2koj_A Partitioning defective 31.9 44 0.0013 16.1 4.9 44 15-58 58-102 (111)
71 >3ca8_A Protein YDCF; two doma 30.1 48 0.0014 15.9 3.2 39 14-52 80-120 (151)
72 >1tmy_A CHEY protein, TMY; che 28.4 51 0.0015 15.8 4.8 31 17-50 2-32 (120)
73 >1u9y_A RPPK;, ribose-phosphat 28.3 52 0.0015 15.8 4.4 42 11-52 41-85 (156)
74 >1s8n_A Putative antiterminato 28.3 52 0.0015 15.8 5.0 36 13-51 9-44 (143)
75 >3eod_A Protein HNR; response 27.8 38 0.0011 16.5 2.1 34 13-49 3-36 (130)
76 >1nh8_A ATP phosphoribosyltran 27.5 26 0.00076 17.4 1.2 20 23-49 66-85 (93)
77 >2h06_A Ribose-phosphate pyrop 26.5 56 0.0016 15.6 4.8 42 11-52 44-89 (181)
78 >1h3d_A ATP-phosphoribosyltran 26.1 28 0.00083 17.2 1.2 13 23-35 67-79 (93)
79 >1ys7_A Transcriptional regula 26.1 57 0.0017 15.5 4.5 33 13-48 3-35 (131)
80 >3kht_A Response regulator; PS 24.9 39 0.0012 16.4 1.7 30 14-46 2-31 (144)
81 >1k68_A Phytochrome response r 24.8 36 0.0011 16.6 1.6 32 16-50 1-33 (140)
82 >2yt7_A Amyloid beta A4 precur 24.8 60 0.0018 15.4 4.4 43 14-56 55-98 (101)
83 >1ve4_A ATP phosphoribosyltran 24.4 42 0.0012 16.2 1.8 22 23-51 60-81 (86)
84 >2ayx_A Sensor kinase protein 23.2 61 0.0018 15.4 2.5 35 12-49 7-41 (137)
85 >1c96_A Mitochondrial aconitas 23.1 20 0.00058 18.0 -0.0 42 14-55 90-131 (219)
86 >1z7m_E ATP phosphoribosyltran 23.0 28 0.00082 17.2 0.7 21 23-50 63-83 (87)
87 >1qys_A TOP7; alpha-beta, nove 22.0 47 0.0014 16.0 1.7 40 17-57 14-57 (106)
88 >1dbw_A Transcriptional regula 21.9 69 0.002 15.1 4.9 31 15-48 1-31 (126)
89 >2q9v_A Membrane-associated gu 21.8 50 0.0015 15.8 1.8 37 16-52 48-84 (90)
90 >2wbn_A G2P, terminase large s 21.3 71 0.0021 15.0 2.6 35 16-50 74-108 (212)
91 >2vd3_A ATP phosphoribosyltran 21.0 72 0.0021 15.0 2.7 32 27-58 45-76 (77)
92 >3g4d_A (+)-delta-cadinene syn 20.9 12 0.00036 19.1 -1.5 19 21-39 18-36 (150)
93 >2jba_A Phosphate regulon tran 20.7 59 0.0018 15.4 2.0 30 17-49 2-31 (127)
94 >2jvf_A De novo protein M7; te 20.5 52 0.0015 15.7 1.7 37 21-57 19-59 (96)
95 >2vd3_A ATP phosphoribosyltran 20.2 57 0.0017 15.5 1.8 13 23-35 68-80 (94)
No 1
>>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A* (A:176-351)
Probab=99.29 E-value=7e-12 Score=85.26 Aligned_cols=52 Identities=25% Similarity=0.312 Sum_probs=45.8
Q ss_pred ECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECC
Q ss_conf 2510210028975999920045738899999999978997899999983068
Q gi|254780309|r 7 VPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLK 58 (59)
Q Consensus 7 i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~~ 58 (59)
........++||+|+||||++|||+|+.++++.|+++||++|++++++....
T Consensus 87 ~~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~L~~~Ga~~V~~~~~~~~~~ 138 (176)
T 2ji4_A 87 PPITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLS 138 (176)
T ss_dssp -CCCEESCCTTSEEEEEEEEECSCHHHHHHHHHHHHTTCCEEEEEEEEECCC
T ss_pred CCEEEEEECCCCEEEEECCHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCCC
T ss_conf 2203565117978999664110278799999999865998379999798688
No 2
>>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} (A:)
Probab=99.26 E-value=1.6e-11 Score=83.40 Aligned_cols=54 Identities=19% Similarity=0.305 Sum_probs=47.0
Q ss_pred EEECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECC
Q ss_conf 882510210028975999920045738899999999978997899999983068
Q gi|254780309|r 5 FNVPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLK 58 (59)
Q Consensus 5 f~i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~~ 58 (59)
..........++||+|||||||+|||.|+.++++.|+++||+.|++++++....
T Consensus 108 ~~~~~~~~~~~~gk~VliVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~ 161 (175)
T 1vch_A 108 LWLDRRFAEKLLNQRVVLVSDVVASGETMRAMEKMVLRAGGHVVARLAVFRQGT 161 (175)
T ss_dssp EEECHHHHHHHTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECSC
T ss_pred EEEECCHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCEEEEEEEEEEECC
T ss_conf 465211112138988999860786795099999999987997999999997378
No 3
>>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} (A:242-459)
Probab=99.13 E-value=6.4e-11 Score=80.07 Aligned_cols=48 Identities=27% Similarity=0.430 Sum_probs=43.5
Q ss_pred HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECC
Q ss_conf 210028975999920045738899999999978997899999983068
Q gi|254780309|r 11 VSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLK 58 (59)
Q Consensus 11 ~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~~ 58 (59)
...+++||+|+||||+++||.|+.++++.|+++||++|++++++...+
T Consensus 91 ~~~~v~gk~vlIVDDii~TG~Tl~~~a~~Lk~~GA~~V~~~~~h~~~~ 138 (218)
T 1ao0_A 91 VRGVVEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKISSPPIA 138 (218)
T ss_dssp CHHHHTTCEEEEEESCCSSSHHHHHHHHHHHHTTCSEEEEEESSCCCC
T ss_pred HHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf 243116860799822220225699999999857998899997889847
No 4
>>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} (A:15-160)
Probab=99.12 E-value=1.3e-10 Score=78.36 Aligned_cols=49 Identities=10% Similarity=0.142 Sum_probs=44.0
Q ss_pred CHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEC
Q ss_conf 1021002897599992004573889999999997899789999998306
Q gi|254780309|r 9 QYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSL 57 (59)
Q Consensus 9 ~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~ 57 (59)
......++||+||||||++|||+|+.++++.|+++|+++|++++++...
T Consensus 81 ~~~~~~~~gk~VliVDDvi~TG~T~~~~~~~L~~~G~~~v~~~vl~~~~ 129 (146)
T 1tc1_A 81 LDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKR 129 (146)
T ss_dssp ECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECT
T ss_pred CCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEC
T ss_conf 2474224796279982413589999999999970379815899999707
No 5
>>2jbh_A HHGP; glycosyltransferase, PRTFDC1, transferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens} (A:)
Probab=99.09 E-value=3.2e-10 Score=76.33 Aligned_cols=50 Identities=20% Similarity=0.262 Sum_probs=44.7
Q ss_pred ECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf 25102100289759999200457388999999999789978999999830
Q gi|254780309|r 7 VPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59)
Q Consensus 7 i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59)
.......+++||+|+||||+++||.|+.++++.|++.||++|++++++.-
T Consensus 124 ~~~~~~~~v~Gk~ViIVDDiidtG~Tl~~~~~~l~~~Ga~~V~~~~~~~~ 173 (225)
T 2jbh_A 124 IGGDDLSTLAGKNVLIVEDVVGTGRTMKALLSNIEKYKPNMIKVASLLVK 173 (225)
T ss_dssp ESSSCGGGGTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEE
T ss_pred EECCCHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEE
T ss_conf 30465566346426875020417899999999997548421038999990
No 6
>>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} (A:31-176)
Probab=99.09 E-value=2.3e-10 Score=77.08 Aligned_cols=48 Identities=13% Similarity=0.165 Sum_probs=43.1
Q ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEC
Q ss_conf 021002897599992004573889999999997899789999998306
Q gi|254780309|r 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSL 57 (59)
Q Consensus 10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~ 57 (59)
.....++||+||||||++|||.|+.++.+.|+++|+++|+++++....
T Consensus 81 ~~~~~~~g~~VliVDDvi~TG~T~~~~~~~L~~~G~~~v~~~~l~~~~ 128 (146)
T 1pzm_A 81 DVRDSVENRHIMLVEDIVDSAITLQYLMRFMLAKKPASLKTVVLLDKP 128 (146)
T ss_dssp CCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECG
T ss_pred CCHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEEEEEC
T ss_conf 762345317458985024247799999999971099868999999807
No 7
>>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} (A:)
Probab=99.08 E-value=2e-10 Score=77.37 Aligned_cols=48 Identities=21% Similarity=0.263 Sum_probs=43.5
Q ss_pred HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECC
Q ss_conf 210028975999920045738899999999978997899999983068
Q gi|254780309|r 11 VSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLK 58 (59)
Q Consensus 11 ~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~~ 58 (59)
...+++||+||||||+++||+|+.++++.|++.||++|++++++...+
T Consensus 106 ~~~~~~gk~VliVDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~~~~~~ 153 (201)
T 1w30_A 106 PAGGIDDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQLAVLVDRG 153 (201)
T ss_dssp CTTCSTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCC
T ss_conf 565547867999822003470399999999736998779999998289
No 8
>>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} (A:18-155)
Probab=99.06 E-value=3.9e-10 Score=75.84 Aligned_cols=51 Identities=16% Similarity=0.245 Sum_probs=45.0
Q ss_pred CCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECC
Q ss_conf 510210028975999920045738899999999978997899999983068
Q gi|254780309|r 8 PQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLK 58 (59)
Q Consensus 8 ~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~~ 58 (59)
.......++||+||||||+++||.|+..+++.|+++|++.|.++++....+
T Consensus 69 ~~~~~~~~~gk~VliVDDvi~tG~Tl~~~~~~l~~~ga~~v~~~~l~~~~~ 119 (138)
T 1hgx_A 69 SKDLKTNIEGRHVLVVEDIIDTGLTMYQLLNNLQMRKPASLKVCTLCDKDI 119 (138)
T ss_dssp EECCSSCCTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred CCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHCCCCCEEEEEEEEECCC
T ss_conf 036874533361799853632107999999998068997999999998576
No 9
>>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxantine-guanine phosphoribosyltransferase, 2-(N- morpholino)ethanesulfonic acid (MES); HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A* (A:38-174)
Probab=99.06 E-value=4.6e-10 Score=75.43 Aligned_cols=51 Identities=24% Similarity=0.339 Sum_probs=44.4
Q ss_pred EECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf 825102100289759999200457388999999999789978999999830
Q gi|254780309|r 6 NVPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59)
Q Consensus 6 ~i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59)
.........++||+||||||+++||.|+.++.+.|++.|++.+.++++...
T Consensus 68 ~~~~~~~~~~~gk~VliVDDii~TG~T~~~~~~~L~~~G~~~v~~~~l~~~ 118 (137)
T 3hvu_A 68 KILKDLDTSVEGRDILIVEDIIDSGLTLSYLVDLFKYRKAKSVKIVTLLDK 118 (137)
T ss_dssp EEEECCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEEC
T ss_pred EEECCCCCCCCCCEEEEEECEECHHHHHHHHHHHHHHCCCCCEEEEEEEEE
T ss_conf 781378867699989998132006599999999999619984189999982
No 10
>>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis} (A:20-156)
Probab=99.04 E-value=5e-10 Score=75.28 Aligned_cols=50 Identities=16% Similarity=0.236 Sum_probs=43.9
Q ss_pred ECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf 25102100289759999200457388999999999789978999999830
Q gi|254780309|r 7 VPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59)
Q Consensus 7 i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59)
........++||+||||||+++||.|+.++.+.|+++|++.|+++++...
T Consensus 69 ~~~~~~~~~~gk~vliVDDii~tG~T~~~~~~~l~~~G~~~v~~~~l~~~ 118 (137)
T 2geb_A 69 IIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDK 118 (137)
T ss_dssp EEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEEC
T ss_pred EECCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC
T ss_conf 82467527789989999503022299999999997212456289999871
No 11
>>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} (A:)
Probab=99.04 E-value=7.7e-10 Score=74.24 Aligned_cols=47 Identities=19% Similarity=0.229 Sum_probs=42.5
Q ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf 02100289759999200457388999999999789978999999830
Q gi|254780309|r 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59)
Q Consensus 10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59)
.....++|++|+||||++|||.|+.++++.|++.||+.|.++++.-.
T Consensus 115 ~~~~~~~g~~VliVDDvitTG~Tl~~~~~~L~~~ga~~v~~~vl~~~ 161 (187)
T 1g2q_A 115 QKNAIPAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLEYNFVMEL 161 (187)
T ss_dssp ETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEC
T ss_pred ECCCCCCCCEEEEEEHHHHHCHHHHHHHHHHHHCCCEEEEEEEEEEC
T ss_conf 02543578638998535351759999999999879979999999982
No 12
>>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, polymorphism, purine salvage; HET: AMP; 1.76A {Homo sapiens} (A:)
Probab=99.02 E-value=7.4e-10 Score=74.34 Aligned_cols=49 Identities=18% Similarity=0.262 Sum_probs=43.6
Q ss_pred CHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEC
Q ss_conf 1021002897599992004573889999999997899789999998306
Q gi|254780309|r 9 QYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSL 57 (59)
Q Consensus 9 ~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~ 57 (59)
......++||+|+|||||++||.|+.++++.|+++||+.|.++++.-..
T Consensus 112 ~~~~~~~~Gk~VliVDDvi~tG~Tl~~~~~~l~~~Ga~~v~~~~~~~~~ 160 (180)
T 1zn8_A 112 IQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELT 160 (180)
T ss_dssp EETTSSCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEEEG
T ss_pred HCCCCCCCCCEEEEEHHHHHHCHHHHHHHHHHHHCCCEEEEEEEEEECC
T ss_conf 0246323686499983775518189999999998799899999999867
No 13
>>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransferase; purine biosynthesis, glycosyltransferase, glutamine amidotransferase; HET: PIN; 2.00A {Escherichia coli} (A:258-459)
Probab=99.01 E-value=3.5e-10 Score=76.09 Aligned_cols=46 Identities=22% Similarity=0.311 Sum_probs=42.1
Q ss_pred HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEC
Q ss_conf 1002897599992004573889999999997899789999998306
Q gi|254780309|r 12 SKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSL 57 (59)
Q Consensus 12 ~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~ 57 (59)
...++||+||||||++|||.|+.++++.|+++||+.|+++++++..
T Consensus 97 ~~~v~gk~vlIVDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~~~~~ 142 (202)
T 1ecf_A 97 RAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEI 142 (202)
T ss_dssp GGGTTTCCEEEEESCCSSSHHHHHHHHHHHHTTCSSEEEEESSCCC
T ss_pred HHHCCCCCEECCCCCEEEECCHHHHHHHHHHCCCCEEEEEECCCCC
T ss_conf 4633887134179861022169999999987799789999779973
No 14
>>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding protein, pyrimidine biosynthesis; 1.60A {Bacillus subtilis} (A:)
Probab=99.01 E-value=7.5e-10 Score=74.30 Aligned_cols=54 Identities=22% Similarity=0.250 Sum_probs=45.5
Q ss_pred EEEECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEC
Q ss_conf 088251021002897599992004573889999999997899789999998306
Q gi|254780309|r 4 AFNVPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSL 57 (59)
Q Consensus 4 af~i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~ 57 (59)
...........++||+||||||+++||.|+.++++.|+++|++++..+++....
T Consensus 85 ~~~~~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~L~~~g~~~v~~~~~~~~~ 138 (181)
T 1a3c_A 85 PLVKGADIPVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDR 138 (181)
T ss_dssp CEEEEEECSSCCTTSEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEEC
T ss_pred CEEECCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEECC
T ss_conf 478614576213597899994223258479999999974289778999999818
No 15
>>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} (A:1-8,A:70-209)
Probab=99.00 E-value=4.3e-10 Score=75.63 Aligned_cols=51 Identities=24% Similarity=0.336 Sum_probs=45.1
Q ss_pred EECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf 825102100289759999200457388999999999789978999999830
Q gi|254780309|r 6 NVPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59)
Q Consensus 6 ~i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59)
.+......+++||+|+||||+++||.|+..+++.|+++||++|+++++...
T Consensus 52 ~~~~~~~~~v~gk~ViivDDii~TG~Tl~~~~~~L~~~Ga~~I~~~~l~~~ 102 (148)
T 1i5e_A 52 EYYVKLPSDVEERDFIIVDPMLATGGSAVAAIDALKKRGAKSIKFMCLIAA 102 (148)
T ss_dssp EEEEECCTTTTTSEEEEECSEESSSHHHHHHHHHHHHTTCCCEEEECSEEC
T ss_pred EEEEECCCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHCCCCEEEEEEEEEC
T ss_conf 899852676666508987366523266999999999679970899998633
No 16
>>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis MB4} (A:39-176)
Probab=99.00 E-value=9.6e-10 Score=73.71 Aligned_cols=50 Identities=16% Similarity=0.200 Sum_probs=43.9
Q ss_pred CCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEC
Q ss_conf 51021002897599992004573889999999997899789999998306
Q gi|254780309|r 8 PQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSL 57 (59)
Q Consensus 8 ~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~ 57 (59)
.......+.||+||||||+++||.|+.++++.|++.|++.|+++++....
T Consensus 71 ~~~~~~~~~gk~VlivDDii~TG~Tl~~~~~~l~~~G~~~i~~~~l~~~~ 120 (138)
T 1yfz_A 71 IKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKP 120 (138)
T ss_dssp EECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECG
T ss_pred ECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEC
T ss_conf 24676477999799993104455999999999971084015799999847
No 17
>>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} (A:)
Probab=98.99 E-value=9.4e-10 Score=73.77 Aligned_cols=48 Identities=15% Similarity=0.245 Sum_probs=43.1
Q ss_pred CHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf 102100289759999200457388999999999789978999999830
Q gi|254780309|r 9 QYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59)
Q Consensus 9 ~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59)
......++||+|+||||+++||.|+.++.+.|+++||++|++++++--
T Consensus 118 ~~~~~~v~Gk~VliVDDii~TG~Tl~~~~~~L~~~GA~~v~~~~~~~~ 165 (217)
T 1z7g_A 118 GDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVK 165 (217)
T ss_dssp SSCGGGGTTSEEEEEEEECCCHHHHHHHHHHHHTTCCSEEEEEEEEEE
T ss_pred CCCHHHHHCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEC
T ss_conf 688787741347887224668999999999984767873179999961
No 18
>>1j7j_A HPRT, hypoxanthine phosphoribosyltransferase; glycosyltransferase, nucleotide metabolism, purine salvage; 2.30A {Salmonella typhimurium} (A:12-150)
Probab=98.98 E-value=8e-10 Score=74.15 Aligned_cols=47 Identities=17% Similarity=0.294 Sum_probs=42.1
Q ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf 02100289759999200457388999999999789978999999830
Q gi|254780309|r 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59)
Q Consensus 10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59)
.....++||+||||||+++||.|+.++.+.|++.|+++|+++++...
T Consensus 74 ~~~~~~~gk~VLiVDDvi~TG~T~~~~~~~l~~~g~~~v~~~vl~~~ 120 (139)
T 1j7j_A 74 DLDEDIRGKDVLIVEDIIDSGNTLSKVREILGLREPKSLAICTLLDK 120 (139)
T ss_dssp CCSSCCBTSEEEEEEEEESSCHHHHHHHHHHHTTCBSEEEEEEEEEC
T ss_pred CCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHCCCCEEEEEEEEEE
T ss_conf 88756589779999402025789999999986159996999999998
No 19
>>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, structural genomics, PSI, protein structure initative; HET: G4P; 1.80A {Bacillus subtilis} (A:)
Probab=98.98 E-value=1.5e-09 Score=72.65 Aligned_cols=47 Identities=23% Similarity=0.231 Sum_probs=42.5
Q ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf 02100289759999200457388999999999789978999999830
Q gi|254780309|r 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59)
Q Consensus 10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59)
.....++|++||||||+++||.|+.++.+.|+++||+.|.++++..-
T Consensus 113 ~~~~~~~g~~VliVDDii~TG~T~~~~~~~l~~~Ga~~v~~~vl~~~ 159 (197)
T 1y0b_A 113 SGTHLSDQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAGIGIVIEK 159 (197)
T ss_dssp EGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred HHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEC
T ss_conf 34542479469980787634245999999999889989999999984
No 20
>>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} (A:)
Probab=98.97 E-value=1.2e-09 Score=73.13 Aligned_cols=48 Identities=23% Similarity=0.351 Sum_probs=42.4
Q ss_pred CHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf 102100289759999200457388999999999789978999999830
Q gi|254780309|r 9 QYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59)
Q Consensus 9 ~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59)
......++||+||||||+++||.|+.++++.|+++||++++++++...
T Consensus 75 ~~~~~~~~gk~vliVDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~l~~~ 122 (153)
T 1vdm_A 75 IPIHGDLKDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIACLAMK 122 (153)
T ss_dssp ECCCSCCBTCEEEEEEEEESSCHHHHHHHHHHHTTTBSEEEEEEEEEC
T ss_pred CCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEEEEC
T ss_conf 024323589989999610536874899998777409952789999987
No 21
>>1cjb_A Protein (hypoxanthine-guanine phosphoribosyltransferase); malaria, purine salvage, transition state inhibitor; HET: IRP; 2.00A {Plasmodium falciparum} (A:)
Probab=98.97 E-value=1.5e-09 Score=72.68 Aligned_cols=49 Identities=24% Similarity=0.196 Sum_probs=43.4
Q ss_pred CHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEC
Q ss_conf 1021002897599992004573889999999997899789999998306
Q gi|254780309|r 9 QYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSL 57 (59)
Q Consensus 9 ~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~ 57 (59)
.....+++||+|+||||+++||.|+.++++.|++.||++|++++++-..
T Consensus 129 ~~~~~~~~Gk~VlIVDDii~tG~Tl~~~~~~L~~~Ga~~v~~~~~~~~~ 177 (231)
T 1cjb_A 129 SEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKR 177 (231)
T ss_dssp ESCGGGGBTCEEEEEEEEESSSHHHHHHHHHHGGGCBSEEEEEEEEEEC
T ss_pred CCCCHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC
T ss_conf 3571342354169983003278999999999987667740188666504
No 22
>>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} (A:77-291)
Probab=98.94 E-value=1.6e-09 Score=72.57 Aligned_cols=47 Identities=21% Similarity=0.225 Sum_probs=42.2
Q ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf 02100289759999200457388999999999789978999999830
Q gi|254780309|r 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59)
Q Consensus 10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59)
.....++||+|+||||+++||.|+.++++.|+++||+.|.++++.-.
T Consensus 113 ~~~~~~~Gk~VliVDDvi~TG~T~~~~~~~l~~~Ga~~v~v~~~~~~ 159 (215)
T 1o57_A 113 AKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLVEA 159 (215)
T ss_dssp EGGGSCTTCEEEEEEEEESSSHHHHHHHHHTGGGTCEEEEEEEEEEE
T ss_pred ECCCCCCCCEEEEEEEEHHCCHHHHHHHHHHHHCCCEEEEEEEEEEC
T ss_conf 02210469789999972302867999999999879979999999989
No 23
>>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} (A:)
Probab=98.93 E-value=1.7e-09 Score=72.39 Aligned_cols=46 Identities=22% Similarity=0.244 Sum_probs=41.7
Q ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf 0210028975999920045738899999999978997899999983
Q gi|254780309|r 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59)
Q Consensus 10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59)
....+++||+|+|||||++||.|+.++++.|++.||++|+++++-.
T Consensus 113 ~~~~~v~gk~viIvDDii~TG~Tl~~a~~~Lk~~Ga~~V~~~~~i~ 158 (208)
T 1wd5_A 113 RPKAARKGRDVVLVDDGVATGASXEAALSVVFQEGPRRVVVAVPVA 158 (208)
T ss_dssp SCCCCCTTSEEEEECSCBSSCHHHHHHHHHHHTTCCSEEEEEEEEB
T ss_pred CCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf 8962448988999942214346699999999836998899982248
No 24
>>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12} (A:)
Probab=98.91 E-value=3.8e-09 Score=70.48 Aligned_cols=47 Identities=21% Similarity=0.311 Sum_probs=42.6
Q ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf 02100289759999200457388999999999789978999999830
Q gi|254780309|r 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59)
Q Consensus 10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59)
+....++|++|+||||+++||.|+.++++.|+++||+.|+++++.-.
T Consensus 119 ~~~~~~~G~~vliVDDvi~tG~T~~~~~~~L~~~GA~~v~v~~~~~~ 165 (190)
T 2dy0_A 119 HVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINL 165 (190)
T ss_dssp EGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred CCCCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHCCCEEEEEEEEEEC
T ss_conf 15765899989998377441768999999999869989999999985
No 25
>>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, catalytic loop; HET: 9DA; 1.85A {Giardia intestinalis} (A:)
Probab=98.90 E-value=1.2e-09 Score=73.28 Aligned_cols=44 Identities=27% Similarity=0.171 Sum_probs=39.4
Q ss_pred HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf 10028975999920045738899999999978997899999983
Q gi|254780309|r 12 SKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59)
Q Consensus 12 ~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59)
...++||+|+||||+++||.|+.++++.|+++|++.|.+++++-
T Consensus 112 ~~~~~Gk~VliVDDvi~TG~T~~~~~~~l~~~Ga~vv~v~v~~~ 155 (186)
T 1l1q_A 112 RQLGPHDVVLLHDDVLATGGTLLAAIELCETAGVKPENIYINVL 155 (186)
T ss_dssp GGCCTTCCEEEEEEEESSSHHHHHHHHHHHHTTCCGGGEEEEEE
T ss_pred HHCCCCCEEEEEEECHHHCHHHHHHHHHHHHCCCCEEEEEEEEE
T ss_conf 34178998999973033256999999999987994688999999
No 26
>>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} (A:1-215)
Probab=98.90 E-value=2.6e-09 Score=71.40 Aligned_cols=45 Identities=27% Similarity=0.378 Sum_probs=41.2
Q ss_pred HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf 100289759999200457388999999999789978999999830
Q gi|254780309|r 12 SKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59)
Q Consensus 12 ~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59)
...++||+|+||||+++||.|+.++++.|+++||+.|+++++.-.
T Consensus 133 ~~~~~G~~VlIVDDvi~tG~T~~~~~~~l~~~GA~~v~~~~~~~~ 177 (215)
T 1qb7_A 133 GSIGKGSRVVLIDDVLATGGTALSGLQLVEASDAVVVEMVSILSI 177 (215)
T ss_dssp TSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEC
T ss_pred CCCCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEEEEC
T ss_conf 866789769999600624669999999999879979999999986
No 27
>>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii RH} (A:)
Probab=98.90 E-value=5.5e-09 Score=69.64 Aligned_cols=48 Identities=21% Similarity=0.231 Sum_probs=42.9
Q ss_pred CHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf 102100289759999200457388999999999789978999999830
Q gi|254780309|r 9 QYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59)
Q Consensus 9 ~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59)
.....+++||+|+||||+++||.|+..+.+.|++.||+++.++++.-.
T Consensus 134 ~~~~~~i~gk~ViIvDdii~TG~Tl~~~~~~L~~~Ga~~v~i~~~~~~ 181 (233)
T 1fsg_A 134 SDDLSIFRDKHVLIVEDIVDTGFTLTEFGERLKAVGPKSMRIATLVEK 181 (233)
T ss_dssp CSCGGGGTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEE
T ss_pred CCCCHHHCCCCEEEEECEECCCHHHHHHHHHHHCCCCCEEEEEEEEEE
T ss_conf 677312117818998123244578999999997259987999999980
No 28
>>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} (A:11-155)
Probab=98.90 E-value=3.2e-09 Score=70.92 Aligned_cols=45 Identities=33% Similarity=0.358 Sum_probs=38.0
Q ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf 021002897599992004573889999999997899789999998
Q gi|254780309|r 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFS 54 (59)
Q Consensus 10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~la 54 (59)
.....++||+||||||+++||.|+.++++.|+++|+.++..++..
T Consensus 79 ~~~~~~~gk~VliVDDii~TG~T~~~~~~~l~~~g~~~v~~~~v~ 123 (145)
T 1ufr_A 79 RIPFDLTGKAIVLVDDVLYTGRTARAALDALIDLGRPRRIYLAVL 123 (145)
T ss_dssp EECSCCTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEE
T ss_pred CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf 576665687599995244667059999999852289968999999
No 29
>>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} (A:40-184)
Probab=98.89 E-value=2.2e-09 Score=71.74 Aligned_cols=46 Identities=20% Similarity=0.286 Sum_probs=41.9
Q ss_pred HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf 2100289759999200457388999999999789978999999830
Q gi|254780309|r 11 VSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59)
Q Consensus 11 ~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59)
....++||+|+||||+++||.|+.++.+.|+++|+++|.++++...
T Consensus 72 ~~~~~~gk~VliVDDvi~TG~T~~~~~~~L~~~ga~~v~~a~l~~~ 117 (145)
T 1lh0_A 72 LVGSALQGRVMLVDDVITAGTAIRESMEIIQAHGATLAGVLISLDR 117 (145)
T ss_dssp EEESCCCSEEEEECSCCSSSCHHHHHHHHHHHTTCEEEEEEEEEEC
T ss_pred CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEEEEE
T ss_conf 1367777609999731243664899999999879969999999861
No 30
>>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A* (A:1-20,A:44-207)
Probab=98.89 E-value=3.3e-09 Score=70.81 Aligned_cols=45 Identities=24% Similarity=0.285 Sum_probs=41.2
Q ss_pred HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf 100289759999200457388999999999789978999999830
Q gi|254780309|r 12 SKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59)
Q Consensus 12 ~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59)
...++||+|+||||+++||.|+.++++.|+++|+++|.++++.-.
T Consensus 97 ~~~~~gk~VllVDDii~TG~Tl~~~~~~L~~~Ga~~V~~~~l~~~ 141 (184)
T 2ps1_A 97 GSALENKRILIIDDVMTAGTAINEAFEIISNAKGQVVGSIIALDR 141 (184)
T ss_dssp ESCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEEC
T ss_pred CCCCCCCCEEEEEHHHCCCCCHHHHHHHHHHHCCCCCEEEEEEEC
T ss_conf 874544433552201201622388999987606766479999960
No 31
>>2ywu_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 2ywt_A* 2yws_A* (A:)
Probab=98.88 E-value=3.7e-09 Score=70.57 Aligned_cols=47 Identities=15% Similarity=0.237 Sum_probs=41.9
Q ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf 02100289759999200457388999999999789978999999830
Q gi|254780309|r 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59)
Q Consensus 10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59)
....+++||+|+||||+++||.|+.++++.|++.|++++.++++.-.
T Consensus 88 ~~~~~~~gk~VliVDDvi~TG~Tl~~~~~~l~~~G~~~v~~~~~~~~ 134 (181)
T 2ywu_A 88 DLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSK 134 (181)
T ss_dssp CCCSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEC
T ss_pred CCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEEEEC
T ss_conf 67544456526999888616478999999998629965999999983
No 32
>>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens} (A:39-171)
Probab=98.86 E-value=3.9e-09 Score=70.45 Aligned_cols=45 Identities=22% Similarity=0.279 Sum_probs=41.6
Q ss_pred HCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEC
Q ss_conf 002897599992004573889999999997899789999998306
Q gi|254780309|r 13 KHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSL 57 (59)
Q Consensus 13 ~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~ 57 (59)
..++||+|+||||+++||.|+.++.+.|+++|++.|.++++..-.
T Consensus 69 ~~~~G~~VliVDDii~tG~T~~~~~~~l~~~ga~~v~~~vl~~~~ 113 (133)
T 2wns_A 69 TINPGETCLIIEDVVTSGSSVLETVEVLQKEGLKVTDAIVLLDRE 113 (133)
T ss_dssp CCCTTCBEEEEEEEESSSHHHHHHHHHHHHTTCBCCEEEEEEECC
T ss_pred CCCCCCEEEEEEEEEHHCHHHHHHHHHHHHCCCEEEEEEEEEECC
T ss_conf 778999999998650125679999999998799799999999788
No 33
>>2ehj_A Uracil phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Escherichia coli} (A:)
Probab=98.86 E-value=5e-09 Score=69.86 Aligned_cols=50 Identities=22% Similarity=0.311 Sum_probs=44.6
Q ss_pred CCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEC
Q ss_conf 51021002897599992004573889999999997899789999998306
Q gi|254780309|r 8 PQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSL 57 (59)
Q Consensus 8 ~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~ 57 (59)
......+++||+|+|+||+++||.|+..+++.|++.||++|++++..-+.
T Consensus 114 ~~~~~~~v~g~~viivDdii~TG~T~~~a~~~L~~~Ga~~I~~~~~h~~~ 163 (208)
T 2ehj_A 114 FQKLVSNIDERMALIVDPMLATGGSVIATIDLLKKAGCSSIKVLVLVAAP 163 (208)
T ss_dssp EEECCSCGGGCEEEEEEEEESSCHHHHHHHHHHHHTTCCEEEEEEEEECH
T ss_pred EEEEECCCCCCEEEEECHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEECH
T ss_conf 88760345664599972254166569999999984799857999996157
No 34
>>2p1z_A Phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 2.44A {Corynebacterium diphtheriae NCTC13129} (A:)
Probab=98.85 E-value=3.8e-09 Score=70.47 Aligned_cols=47 Identities=34% Similarity=0.453 Sum_probs=42.0
Q ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf 02100289759999200457388999999999789978999999830
Q gi|254780309|r 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59)
Q Consensus 10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59)
.....++||+|+||||+++||.|+.++++.|++.||+.|.++++.-.
T Consensus 107 ~~~~~~~G~~vliVDDii~tG~T~~~~~~~l~~~Ga~~v~~~~~~~~ 153 (180)
T 2p1z_A 107 IEGPDVVGKKVLVVEDTTTTGNSPLTAVKALREAGAEVVGVATVVDR 153 (180)
T ss_dssp EESSCCTTCEEEEEEEECSSSHHHHHHHHHHHHHTCEEEEEEEEEC-
T ss_pred CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEC
T ss_conf 00132455324334878776565999999999879979999999988
No 35
>>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix} (A:1-10,A:35-178)
Probab=98.85 E-value=7.4e-09 Score=68.94 Aligned_cols=48 Identities=21% Similarity=0.227 Sum_probs=43.1
Q ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEC
Q ss_conf 021002897599992004573889999999997899789999998306
Q gi|254780309|r 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSL 57 (59)
Q Consensus 10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~ 57 (59)
.....++||+|+||||+++||.|+.++.+.|+++|++.++++++....
T Consensus 75 ~~~~~~~g~~VlivDDii~tG~T~~~~~~~l~~~ga~~v~~~vl~~~~ 122 (154)
T 2yzk_A 75 QVEGDPPKGRVVVVDDVATTGTSIAKSIEVLRSNGYTVGTALVLVDRG 122 (154)
T ss_dssp CCBTCCCSSEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECC
T ss_pred CCCCCCCCCEEEEEEHHHHCCCCHHHHHHHHHHCCCEEEEEEEEEECC
T ss_conf 223555785699986021036577899999987899799999999887
No 36
>>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomics, JCSG, PSI, protein structure initiative; HET: U5P; 2.30A {Thermotoga maritima} (A:)
Probab=98.82 E-value=4.6e-09 Score=70.07 Aligned_cols=50 Identities=18% Similarity=0.256 Sum_probs=44.1
Q ss_pred CCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEC
Q ss_conf 51021002897599992004573889999999997899789999998306
Q gi|254780309|r 8 PQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSL 57 (59)
Q Consensus 8 ~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~ 57 (59)
......+++||+|+|+||+++||.|+..+++.|++.||++|++++..-..
T Consensus 127 ~~~l~~dv~g~~viivDdii~TG~T~~~a~~~Lk~~Ga~~I~~~~~h~~~ 176 (221)
T 1o5o_A 127 YAKLPPLNDDKEVFLLDPMLATGVSSIKAIEILKENGAKKITLVALIAAP 176 (221)
T ss_dssp EEECCCCCTTCEEEEECSEESSSHHHHHHHHHHHHTTCCEEEEECSEECH
T ss_pred EEECCCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEECH
T ss_conf 45468665687499887886377249999999986699838999987468
No 37
>>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} (A:143-270)
Probab=98.81 E-value=7.4e-09 Score=68.93 Aligned_cols=45 Identities=22% Similarity=0.327 Sum_probs=41.0
Q ss_pred HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf 210028975999920045738899999999978997899999983
Q gi|254780309|r 11 VSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59)
Q Consensus 11 ~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59)
....++||+|+||||+++||.|+.++++.|+++||+++++++++-
T Consensus 57 ~~~~~~gk~vlIvDDii~tG~Tl~~~~~~l~~~ga~~v~~~v~~~ 101 (128)
T 1u9y_A 57 KTLDAKDRDVFIVDDIISTGGTMATAVKLLKEQGAKKIIAACVHP 101 (128)
T ss_dssp SSCCCTTCCEEEEEEECSSSHHHHHHHHHHHHTTCCSEEEEEEEC
T ss_pred CCCCCCCCEEEEECHHHHCCHHHHHHHHHHHHCCCCEEEEEEECC
T ss_conf 124566866999841541334079999999866998699999897
No 38
>>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics; 2.10A {Thermus thermophilus HB8} (A:)
Probab=98.81 E-value=3.8e-09 Score=70.51 Aligned_cols=46 Identities=26% Similarity=0.374 Sum_probs=42.0
Q ss_pred HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf 2100289759999200457388999999999789978999999830
Q gi|254780309|r 11 VSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59)
Q Consensus 11 ~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59)
...+++||+|+||||+++||.|+.++++.|++.||++|++++..-+
T Consensus 117 ~~~dv~g~~viivDdii~TG~T~~~a~~~Lk~~Ga~~I~~~~~h~~ 162 (208)
T 1v9s_A 117 LPPDIAERRAFLLDPXLATGGSASLALSLLKERGATGVKLXAILAA 162 (208)
T ss_dssp CCSCGGGSCEEEECSEESSSHHHHHHHHHHHHTTCCSCEEEEEEEC
T ss_pred CCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEC
T ss_conf 5865345669997806642477999999998659984699999854
No 39
>>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, magnesium, pyrimidine biosynthesis; 2.40A {Streptococcus mutans} (A:100-183)
Probab=98.78 E-value=9.1e-09 Score=68.44 Aligned_cols=40 Identities=25% Similarity=0.468 Sum_probs=36.6
Q ss_pred HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 1002897599992004573889999999997899789999
Q gi|254780309|r 12 SKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSIL 51 (59)
Q Consensus 12 ~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~ 51 (59)
....+||+|+||||+++||.|+.++++.|+++|++.|+++
T Consensus 45 ~~~~~Gk~vliVDDiv~tG~Tl~~~~~~l~~~Ga~~v~a~ 84 (84)
T 3dez_A 45 GRVTKGQKMVIIEDLISTGGSVLDAVAAAQREGADVLGVV 84 (84)
T ss_dssp SCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EECCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCEEEEEE
T ss_conf 2138999799996304577556899999998799799999
No 40
>>2h06_A Ribose-phosphate pyrophosphokinase I; PRS1, PRPP synthetase 1, phosphoribosyl pyrophosphate synthetase 1, transferase; 2.20A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h07_A 2h08_A (A:148-292)
Probab=98.76 E-value=1e-08 Score=68.19 Aligned_cols=46 Identities=28% Similarity=0.192 Sum_probs=41.9
Q ss_pred HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEC
Q ss_conf 1002897599992004573889999999997899789999998306
Q gi|254780309|r 12 SKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSL 57 (59)
Q Consensus 12 ~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~ 57 (59)
...++||+|+||||+++||.|+.++++.|+++|+++|++++++.-.
T Consensus 61 ~~~~~gk~vliVDD~i~tG~T~~~~~~~l~~~ga~~v~~~~~~~~~ 106 (145)
T 2h06_A 61 VGDVKDRVAILVDDMADTCGTICHAADKLLSAGATRVYAILTHGIF 106 (145)
T ss_dssp ESCCTTEEEEEEEEEESSCHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred ECCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCC
T ss_conf 0233353289976630453427777788861698348997434302
No 41
>>2jky_A Hypoxanthine-guanine phosphoribosyltransferase; nucleus, cytoplasm, magnesium, GMP complex, FLIP peptide-plane, glycosyltransferase; HET: 5GP; 2.3A {Saccharomyces cerevisiae} PDB: 2jkz_A* (A:10-185)
Probab=98.75 E-value=2.4e-10 Score=77.00 Aligned_cols=46 Identities=22% Similarity=0.250 Sum_probs=40.3
Q ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf 0210028975999920045738899999999978997899999983
Q gi|254780309|r 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59)
Q Consensus 10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59)
....+++||+|+||||+++||.|+.++++.|++.||++|.++++..
T Consensus 86 ~~~~~~~g~~VlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~~~ 131 (176)
T 2jky_A 86 QCKLDLVGKNVLIVDEVDDTRTTLHYALSELEKDAAEQAKAKGIDT 131 (176)
T ss_dssp CCCCCCTTCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTCCT
T ss_pred CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHC
T ss_conf 7654568987999815358518999999999860807764455530
No 42
>>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, protein structure initiative; 1.95A {Streptococcus pyogenes} (A:68-174)
Probab=98.75 E-value=1.9e-08 Score=66.78 Aligned_cols=44 Identities=25% Similarity=0.419 Sum_probs=40.5
Q ss_pred HCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf 00289759999200457388999999999789978999999830
Q gi|254780309|r 13 KHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59)
Q Consensus 13 ~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59)
...+|++|+||||+++||.|+.++++.|+++||+.+.++++.--
T Consensus 46 ~~~~g~~vliVDDii~tG~T~~~~~~~l~~~Ga~~v~~~v~~~~ 89 (107)
T 2aee_A 46 RVLKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTY 89 (107)
T ss_dssp CCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEC
T ss_pred CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEC
T ss_conf 14799879884898887777887755688739857689999733
No 43
>>2e55_A Uracil phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.15A {Aquifex aeolicus} (A:)
Probab=98.73 E-value=2.1e-08 Score=66.45 Aligned_cols=46 Identities=17% Similarity=0.222 Sum_probs=41.3
Q ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf 0210028975999920045738899999999978997899999983
Q gi|254780309|r 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59)
Q Consensus 10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59)
....+++||+|+|+||+++||.|+..+++.|++.||++|++...--
T Consensus 114 ~~~~d~~g~~viivDdii~TG~T~~~a~~~L~~~Ga~~I~~~h~i~ 159 (208)
T 2e55_A 114 SRLPELKGKIVVILDPMLATGGTLEVALREILKHSPLKVKSVHAIA 159 (208)
T ss_dssp EECCCCBTSEEEEECSEESSSHHHHHHHHHHHTTCBSEEEEEEEEE
T ss_pred HHHHHCCCCCEEEECHHHCCCHHHHHHHHHHHHCCCCCEEEEEEEE
T ss_conf 2244305770798616763773799999998625886179999986
No 44
>>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} (A:)
Probab=98.71 E-value=1.7e-08 Score=66.91 Aligned_cols=43 Identities=14% Similarity=0.115 Sum_probs=39.6
Q ss_pred HCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf 0028975999920045738899999999978997899999983
Q gi|254780309|r 13 KHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59)
Q Consensus 13 ~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59)
.+++||+|+|+||+++||.|+..+++.|++.||++|++++..-
T Consensus 129 ~~v~gk~viIvDdii~tG~T~~~a~~~L~~~Ga~~I~~~~~~~ 171 (216)
T 1xtt_A 129 IRAKVDNVIIADPMIATASTMLKVLEEVVKANPKRIYIVSIIS 171 (216)
T ss_dssp CCTTTCEEEEECSEESSSHHHHHHHHHHGGGCCSEEEEECSEE
T ss_pred CCCCCCEEEEECHHHHCCHHHHHHHHHHHHCCCCEEEEEEEEE
T ss_conf 4344633787281674307699999998515997699999986
No 45
>>1dqn_A Guanine phosphoribosyltransferase; protein-inhibitor complex, Mg IONS, pyrophosphate, transition state analogue; HET: IMU; 1.75A {Giardia lamblia} (A:60-175)
Probab=98.69 E-value=2.7e-09 Score=71.31 Aligned_cols=44 Identities=16% Similarity=0.160 Sum_probs=39.5
Q ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEE
Q ss_conf 02100289759999200457388999999999789978999999
Q gi|254780309|r 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTF 53 (59)
Q Consensus 10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~l 53 (59)
.....++||+||||||+++||.|+.++++.|+++|++.+.+++.
T Consensus 52 ~~~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~~ 95 (116)
T 1dqn_A 52 DLKQLKEKREVVLIDEYVDSGHTIFSIQEQIKHAKICSCFVKDV 95 (116)
T ss_dssp HHHHHHHCSSEEEEEEEESSSHHHHHHHHHSTTCEEEEEEESCH
T ss_pred CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf 23312378737997311235689999999865459966999753
No 46
>>1nul_A XPRT, xanthine-guanine phosphoribosyltransferase; purine salvage enzyme; 1.80A {Escherichia coli} (A:9-131)
Probab=98.69 E-value=1.6e-09 Score=72.45 Aligned_cols=48 Identities=29% Similarity=0.281 Sum_probs=41.6
Q ss_pred HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECCC
Q ss_conf 100289759999200457388999999999789978999999830689
Q gi|254780309|r 12 SKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLKD 59 (59)
Q Consensus 12 ~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~~~ 59 (59)
..+++||+|+||||+++||.|+.++++.|++.|+..|+..+-++..+|
T Consensus 68 ~~~~~g~~VliVDDii~tG~Tl~~~~~~l~~~ga~~v~~~~~~~~~~d 115 (123)
T 1nul_A 68 RAEGDGEGFIVIDDLVDTGGTAVAIREMYPKAHFVTIFAKPAGRPLVD 115 (123)
T ss_dssp CCSSCCTTEEEEEEEECTTSSHHHHHHHCTTSEEEEEEECGGGGGGCS
T ss_pred CCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCC
T ss_conf 257789827999704365399999998667764999998068884798
No 47
>>3dah_A Ribose-phosphate pyrophosphokinase; seattle structural genomics center for infectious disease, ssgcid, cytoplasm, magnesium; HET: AMP; 2.30A {Burkholderia pseudomallei 1710B} (A:153-295)
Probab=98.68 E-value=4.8e-08 Score=64.55 Aligned_cols=47 Identities=30% Similarity=0.279 Sum_probs=42.2
Q ss_pred HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECC
Q ss_conf 10028975999920045738899999999978997899999983068
Q gi|254780309|r 12 SKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLK 58 (59)
Q Consensus 12 ~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~~ 58 (59)
....+|++|+||||+++||.|+..+++.|++.||+.+++.+++-..+
T Consensus 59 ~~~~~g~~viivDDii~tG~T~~~~~~~l~~~ga~~v~~~~~~~~~~ 105 (143)
T 3dah_A 59 IGEVEGRTCVIMDDMVDTAGTLCKAAQVLKERGAKQVFAYATHPVLS 105 (143)
T ss_dssp ----CCSEEEEEEEEESSCHHHHHHHHHHHHTTCSCEEEEEEEECCC
T ss_pred CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCC
T ss_conf 55668988999788656668899999999976998799976667648
No 48
>>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} (D:)
Probab=98.66 E-value=1.5e-08 Score=67.31 Aligned_cols=49 Identities=14% Similarity=0.133 Sum_probs=42.7
Q ss_pred CCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf 5102100289759999200457388999999999789978999999830
Q gi|254780309|r 8 PQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59)
Q Consensus 8 ~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59)
......+++||+|+|+||+++||.|+.++++.|++.||+++++.+.+-.
T Consensus 147 ~~~~~~dv~gr~vIIvDdii~TG~T~~~a~~~Lk~~Ga~~i~~~~th~i 195 (243)
T 1bd3_D 147 YEKLPADIRERWVMLLDPMCATAGSVCKAIEVLLRLGVKEERIIFVNIL 195 (243)
T ss_dssp EEECCTTGGGSEEEEECSEESSCHHHHHHHHHHHHHTCCGGGEEEEEEE
T ss_pred HHHCCCCCCCCEEEEECHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEEE
T ss_conf 8458765345648985746605377999999999739974217999998
No 49
>>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} (A:154-295)
Probab=98.65 E-value=3.1e-08 Score=65.53 Aligned_cols=43 Identities=33% Similarity=0.342 Sum_probs=40.1
Q ss_pred HCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf 0028975999920045738899999999978997899999983
Q gi|254780309|r 13 KHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59)
Q Consensus 13 ~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59)
..++||+|+||||+++||.|+.++++.|++.||+.+.+++++-
T Consensus 60 ~~~~G~~VliVDDvi~tG~T~~~~~~~l~~~Ga~~v~~~~~~~ 102 (142)
T 1dku_A 60 GNIEGKTAILIDDIIDTAGTITLAANALVENGAKEVYACCTHP 102 (142)
T ss_dssp SCCTTCEEEEECSEESSCHHHHHHHHHHHHTTCSEEEEECSEE
T ss_pred CCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEECC
T ss_conf 3547968998776112478899999999976995489998435
No 50
>>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} (A:)
Probab=98.65 E-value=1.1e-08 Score=67.93 Aligned_cols=48 Identities=19% Similarity=0.162 Sum_probs=42.4
Q ss_pred CHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf 102100289759999200457388999999999789978999999830
Q gi|254780309|r 9 QYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59)
Q Consensus 9 ~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59)
..+..+++||+++|+||++.||.|+..+++.|++.||+++++++.+-.
T Consensus 121 ~~l~~dv~~k~viIvDdmi~TG~T~i~a~~~Lk~~Ga~~v~i~~th~i 168 (217)
T 3dmp_A 121 LVRLPDLEDRIFILCDPMVATGYSAAHAIDVLKRRGVPGERLMFLALV 168 (217)
T ss_dssp EEECCCCTTCEEEEECSEESSSHHHHHHHHHHHTTTCCGGGEEEECSE
T ss_pred EECCCCHHHCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEE
T ss_conf 662897343579998043367088999999999869995179999999
No 51
>>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} (A:120-236)
Probab=79.58 E-value=3.8 Score=21.85 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=30.3
Q ss_pred CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 28975999920045738899999999978997899999
Q gi|254780309|r 15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILT 52 (59)
Q Consensus 15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~ 52 (59)
++||+|+|+ =+|.+-..++..|.+.|+++|+++.
T Consensus 1 l~~k~vli~----GaGg~a~ai~~~L~~~g~~~i~I~~ 34 (117)
T 3fbt_A 1 IKNNICVVL----GSGGAARAVLQYLKDNFAKDIYVVT 34 (117)
T ss_dssp CTTSEEEEE----CSSTTHHHHHHHHHHTTCSEEEEEE
T ss_pred CCCCEEEEE----CCCCHHHHHHHHHHHCCCCEEEEEE
T ss_conf 566523554----2563222233334415552699874
No 52
>>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, FMN, FAD, iron, 3Fe-4S, 4Fe-4S, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense} (G:217-322,G:368-379)
Probab=73.88 E-value=7.7 Score=20.23 Aligned_cols=36 Identities=25% Similarity=0.297 Sum_probs=31.4
Q ss_pred CCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEE
Q ss_conf 0289759999200457388999999999789978999999
Q gi|254780309|r 14 HVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTF 53 (59)
Q Consensus 14 ~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~l 53 (59)
...||+|++| =.|.|...++..+...||++|+++..
T Consensus 45 ~~~gK~VvVI----GgG~~A~D~A~~~~r~Ga~~Vtvv~R 80 (118)
T 2vdc_G 45 NAAGKHVVVL----GGGDTAMDCVRTAIRQGATSVKCLYR 80 (118)
T ss_dssp CCCCSEEEEE----CSSHHHHHHHHHHHHTTCSEEEEECS
T ss_pred CCCCCEEEEE----CCCHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf 4578869998----99717899999998614880899751
No 53
>>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, aromatic amino acid biosynthesis, NADP; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* (A:100-250)
Probab=62.95 E-value=8.9 Score=19.88 Aligned_cols=38 Identities=21% Similarity=0.256 Sum_probs=32.4
Q ss_pred HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 210028975999920045738899999999978997899999
Q gi|254780309|r 11 VSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILT 52 (59)
Q Consensus 11 ~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~ 52 (59)
...++++|+++|+ =.|.+-..+++.|.+.|++++.++.
T Consensus 12 ~~~~~~~k~vlvi----GaG~~g~~va~~L~~~g~~~i~i~~ 49 (151)
T 3don_A 12 IYEGIEDAYILIL----GAGGASKGIANELYKIVRPTLTVAN 49 (151)
T ss_dssp HSTTGGGCCEEEE----CCSHHHHHHHHHHHTTCCSCCEEEC
T ss_pred CCCCCCCCEEEEC----CCCCCHHHHHHHHHHHCCCHHHHHH
T ss_conf 2356555324411----3444203344566641110134444
No 54
>>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} (A:102-253)
Probab=61.07 E-value=14 Score=18.75 Aligned_cols=37 Identities=22% Similarity=0.277 Sum_probs=32.0
Q ss_pred HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 21002897599992004573889999999997899789999
Q gi|254780309|r 11 VSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSIL 51 (59)
Q Consensus 11 ~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~ 51 (59)
....++||+++|+ =.|.+...++..|.+.|++++.++
T Consensus 12 ~~~~~~~k~vlIi----GaGg~a~av~~~l~~~g~~~i~I~ 48 (152)
T 1npy_A 12 KYHLNKNAKVIVH----GSGGMAKAVVAAFKNSGFEKLKIY 48 (152)
T ss_dssp HTTCCTTSCEEEE----CSSTTHHHHHHHHHHTTCCCEEEE
T ss_pred HHCCCCCCCEEEE----CCHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 2002578718998----561788887988866487464200
No 55
>>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} (A:138-262)
Probab=59.23 E-value=16 Score=18.57 Aligned_cols=33 Identities=24% Similarity=0.389 Sum_probs=29.8
Q ss_pred CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 2897599992004573889999999997899789999
Q gi|254780309|r 15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSIL 51 (59)
Q Consensus 15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~ 51 (59)
++|++|+|+ =.|.+-+++++.|...|++++.++
T Consensus 2 l~~~~vlii----GaGg~g~~v~~~L~~~Gv~~i~i~ 34 (125)
T 2egg_A 2 LDGKRILVI----GAGGGARGIYFSLLSTAAERIDMA 34 (125)
T ss_dssp CTTCEEEEE----CCSHHHHHHHHHHHTTTCSEEEEE
T ss_pred CCCCEEEEE----CCCCHHHHHHHHHHHCCCCCCCCC
T ss_conf 678769997----676136888999997499621120
No 56
>>1dcf_A ETR1 protein; beta-alpha five sandwich; 2.50A {Arabidopsis thaliana} (A:)
Probab=53.87 E-value=19 Score=18.07 Aligned_cols=34 Identities=21% Similarity=0.303 Sum_probs=23.5
Q ss_pred HCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEE
Q ss_conf 0028975999920045738899999999978997899
Q gi|254780309|r 13 KHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVS 49 (59)
Q Consensus 13 ~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~ 49 (59)
+.++|++||+|||-- .......+.|...|.....
T Consensus 3 ~~~~~~riLvVdd~~---~~~~~~~~~L~~~G~~v~~ 36 (136)
T 1dcf_A 3 SNFTGLKVLVMDENG---VSRMVTKGLLVHLGCEVTT 36 (136)
T ss_dssp CCCTTCEEEEECSCH---HHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCEEEEEECCH---HHHHHHHHHHHHCCCEEEE
T ss_conf 989999999995999---9999999999987999999
No 57
>>3dah_A Ribose-phosphate pyrophosphokinase; seattle structural genomics center for infectious disease, ssgcid, cytoplasm, magnesium; HET: AMP; 2.30A {Burkholderia pseudomallei 1710B} (A:1-152,A:296-319)
Probab=53.09 E-value=20 Score=17.99 Aligned_cols=42 Identities=17% Similarity=0.248 Sum_probs=32.1
Q ss_pred HHHCCCCCEEEEEEECCCCCH----HHHHHHHHHHHCCCCEEEEEE
Q ss_conf 210028975999920045738----899999999978997899999
Q gi|254780309|r 11 VSKHVAGLKILLIDDVYTTGA----TAKCAAIALKKAGAMTVSILT 52 (59)
Q Consensus 11 ~~~~i~gk~vliVDDiitTG~----T~~~~~~~L~~~ga~~V~~~~ 52 (59)
....++|++|+||-+....-. -+--.+..+++.||++|.++.
T Consensus 48 i~~~vrg~dV~iiqs~~~~~nd~lmeLlll~dAlr~~gA~rItlVi 93 (176)
T 3dah_A 48 IQENVRGKDVFVLQSTCAPTNDNLMELMIMVDALKRASAGRITAAI 93 (176)
T ss_dssp ECSCCBTCEEEEECCCCSSHHHHHHHHHHHHHHHHHTTBSEEEEEE
T ss_pred ECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 6897469869999279998506799999999999873897699996
No 58
>>2o7s_A DHQ-SDH, bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase; NADPH, dehydroshikimate, bifunctional enzyme, oxidoreductase; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* (A:334-523)
Probab=49.52 E-value=19 Score=18.09 Aligned_cols=43 Identities=23% Similarity=0.227 Sum_probs=33.7
Q ss_pred EEEECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEE
Q ss_conf 08825102100289759999200457388999999999789978999
Q gi|254780309|r 4 AFNVPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSI 50 (59)
Q Consensus 4 af~i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~ 50 (59)
..+.-+....++++|+++|+ =+|.+-..++..|.+.|++.+.+
T Consensus 18 ~~~~l~~~~~~~~~k~vlvi----GaG~~~~~~~~~L~~~g~~~~i~ 60 (190)
T 2o7s_A 18 DPSSVPSSSSPLASKTVVVI----GAGGAGKALAYGAKEKGAKVVIA 60 (190)
T ss_dssp ---------------CEEEE----CCSHHHHHHHHHHHHHCC-CEEE
T ss_pred CCHHHCCCCCHHHHHHHHHH----HCCCCCHHHHHHHHHCCCEEEEE
T ss_conf 30121035414777899986----32661020021255358458850
No 59
>>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40} (A:1-65)
Probab=46.20 E-value=26 Score=17.38 Aligned_cols=35 Identities=23% Similarity=0.214 Sum_probs=23.7
Q ss_pred HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEE
Q ss_conf 10028975999920045738899999999978997899
Q gi|254780309|r 12 SKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVS 49 (59)
Q Consensus 12 ~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~ 49 (59)
....++.+||+|||--+. ...+...|++.|.....
T Consensus 5 ~~~~~~~~iLiVDD~~~~---~~~~~~~L~~~G~~v~~ 39 (65)
T 3c97_A 5 PSQIMPLSVLIAEDNDIC---RLVAAKALEKCTNDITV 39 (65)
T ss_dssp -----CCEEEEECCCHHH---HHHHHHHHTTTCSEEEE
T ss_pred CCCCCCCEEEEEECCHHH---HHHHHHHHHHCCCEEEE
T ss_conf 999999989999598999---99999999987999999
No 60
>>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus} (A:)
Probab=43.36 E-value=29 Score=17.13 Aligned_cols=31 Identities=23% Similarity=0.260 Sum_probs=19.7
Q ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEE
Q ss_conf 9759999200457388999999999789978999
Q gi|254780309|r 17 GLKILLIDDVYTTGATAKCAAIALKKAGAMTVSI 50 (59)
Q Consensus 17 gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~ 50 (59)
|++||||||--+ ......+.|...|...+.+
T Consensus 1 g~rILiVdDd~~---~~~~l~~~L~~~G~~v~~a 31 (119)
T 2j48_A 1 AGHILLLEEEDE---AATVVCEMLTAAGFKVIWL 31 (119)
T ss_dssp CCEEEEECCCHH---HHHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEEECCHH---HHHHHHHHHHHCCCCEEEE
T ss_conf 999999987899---9999999999769976997
No 61
>>1v7l_A 3-isopropylmalate dehydratase small subunit; beta barrel, lyase; 1.98A {Pyrococcus horikoshii OT3} (A:)
Probab=42.76 E-value=5.9 Score=20.85 Aligned_cols=48 Identities=23% Similarity=0.330 Sum_probs=41.4
Q ss_pred CCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf 510210028975999920045738899999999978997899999983
Q gi|254780309|r 8 PQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59)
Q Consensus 8 ~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59)
.++.....++-+|++..+-+=+|++=.+++..++..|.+.|..-.+||
T Consensus 42 ~~~~~~~~k~~~iiVaG~nfG~GSSRE~A~~al~~~G~~aVIA~SFar 89 (163)
T 1v7l_A 42 RPDFARNVRPGDVVVAGKNFGIGSSRESAALALKALGIAGVIAESFGR 89 (163)
T ss_dssp CTTHHHHCCTTCEEECCSSBTBSCCCTHHHHHHHHHTCCEEEESCBCH
T ss_pred CCHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHCCEEEEHHHHHHH
T ss_conf 941454144567799744445686650488998753351222667889
No 62
>>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901} (A:)
Probab=42.49 E-value=30 Score=17.06 Aligned_cols=29 Identities=34% Similarity=0.360 Sum_probs=12.8
Q ss_pred CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCC
Q ss_conf 28975999920045738899999999978997
Q gi|254780309|r 15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAM 46 (59)
Q Consensus 15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~ 46 (59)
++|++||||||-- .........|...|..
T Consensus 3 ~~~~riLiVDD~~---~~~~~l~~~L~~~g~~ 31 (140)
T 3h5i_A 3 LKDKKILIVEDSK---FQAKTIANILNKYGYT 31 (140)
T ss_dssp ---CEEEEECSCH---HHHHHHHHHHHHTTCE
T ss_pred CCCCEEEEEECCH---HHHHHHHHHHHCCCEE
T ss_conf 8999999996999---9999999998508869
No 63
>>2hcu_A 3-isopropylmalate dehydratase small subunit; beta barrel, lyase; 2.10A {Streptococcus mutans} (A:)
Probab=39.93 E-value=14 Score=18.82 Aligned_cols=42 Identities=24% Similarity=0.306 Sum_probs=37.1
Q ss_pred CCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf 028975999920045738899999999978997899999983
Q gi|254780309|r 14 HVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59)
Q Consensus 14 ~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59)
.-++.+|++..+-+-+|++=.+++..++..|.+-|..-.++|
T Consensus 82 ~~~~~~IlVaG~nfG~GSSREhAa~al~~~Gi~aVIA~SFa~ 123 (213)
T 2hcu_A 82 EYREASILITGDNFGAGSSREHAAWALADYGFKVIVAGSFGD 123 (213)
T ss_dssp GGTTCCEEEECSSBTCSSCCHHHHHHHHHHTCCEEEESCBCH
T ss_pred CCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECHHH
T ss_conf 356774897156100464257786768758604898600778
No 64
>>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consortium, SGC, cytoplasm, polymorphism, protein binding; 2.60A {Homo sapiens} (A:)
Probab=39.67 E-value=33 Score=16.81 Aligned_cols=42 Identities=17% Similarity=0.044 Sum_probs=33.9
Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEC
Q ss_conf 897599992004573889999999997899789999998306
Q gi|254780309|r 16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSL 57 (59)
Q Consensus 16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~ 57 (59)
.|-.|+=|++.-.+|.|..++.+.|+.........+...|..
T Consensus 49 ~GD~Il~INg~~v~~~~~~~v~~~lk~~~~~~~i~l~v~r~~ 90 (95)
T 3gge_A 49 VGDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIEPK 90 (95)
T ss_dssp TTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEEEEEEEEEC
T ss_pred CCCEEEEECCCEECCCCHHHHHHHHHCCCCCCEEEEEEECCC
T ss_conf 688998999907549758999999963999978999995688
No 65
>>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} (A:111-270)
Probab=38.23 E-value=33 Score=16.81 Aligned_cols=38 Identities=21% Similarity=0.282 Sum_probs=31.9
Q ss_pred HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 210028975999920045738899999999978997899999
Q gi|254780309|r 11 VSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILT 52 (59)
Q Consensus 11 ~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~ 52 (59)
...++++|++||+ =+|.+-..++..|.+.|+..|....
T Consensus 12 ~~~~~~~k~vLVi----GaGg~~~~v~~~L~~~g~~~I~~r~ 49 (160)
T 1nvt_A 12 EIGRVKDKNIVIY----GAGGAARAVAFELAKDNNIIIANRT 49 (160)
T ss_dssp HHCCCCSCEEEEE----CCSHHHHHHHHHHTSSSEEEEECSS
T ss_pred CCCCCCCCEEEEE----CCHHHHHHHHHHHHCCCEEEEEECC
T ss_conf 0355678759997----5238899999998508869999388
No 66
>>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A* (A:1-175,A:352-379)
Probab=36.06 E-value=38 Score=16.49 Aligned_cols=41 Identities=17% Similarity=0.177 Sum_probs=31.9
Q ss_pred HHHCCCCCEEEEEEECCCCCH----HHHHHHHHHHHCCCCEEEEE
Q ss_conf 210028975999920045738----89999999997899789999
Q gi|254780309|r 11 VSKHVAGLKILLIDDVYTTGA----TAKCAAIALKKAGAMTVSIL 51 (59)
Q Consensus 11 ~~~~i~gk~vliVDDiitTG~----T~~~~~~~L~~~ga~~V~~~ 51 (59)
....+.|++|+||......-. -+--.+..++++||++|.++
T Consensus 73 i~e~vrg~dV~IIqs~~~~~nd~lmELlllidAlr~~gA~~ItlV 117 (203)
T 2ji4_A 73 IQESVRGKDVFIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGV 117 (203)
T ss_dssp ECSCCTTCEEEEECCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred ECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEE
T ss_conf 688768996899927999813789999999999987377525897
No 67
>>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} (A:1-153,A:296-317)
Probab=34.88 E-value=39 Score=16.38 Aligned_cols=42 Identities=21% Similarity=0.264 Sum_probs=32.2
Q ss_pred HHHCCCCCEEEEEEECCCCCH----HHHHHHHHHHHCCCCEEEEEE
Q ss_conf 210028975999920045738----899999999978997899999
Q gi|254780309|r 11 VSKHVAGLKILLIDDVYTTGA----TAKCAAIALKKAGAMTVSILT 52 (59)
Q Consensus 11 ~~~~i~gk~vliVDDiitTG~----T~~~~~~~L~~~ga~~V~~~~ 52 (59)
...+++|++|+||-.....-. -+--.+..+++.||++|..+.
T Consensus 50 i~~~vrg~dV~iiqs~~~~~nd~lmELll~idAlr~~gA~rItlVi 95 (175)
T 1dku_A 50 IEESIRGCDCYIIQSTSDPVNEHIMELLIMVDALKRASAKTINIVI 95 (175)
T ss_dssp ECSCCTTCEEEEECCCCSSHHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred ECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 6787789859999678998015499999888777634553478833
No 68
>>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} (A:)
Probab=34.78 E-value=18 Score=18.18 Aligned_cols=31 Identities=16% Similarity=0.143 Sum_probs=17.8
Q ss_pred CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEE
Q ss_conf 2897599992004573889999999997899789
Q gi|254780309|r 15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTV 48 (59)
Q Consensus 15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V 48 (59)
+++|+||||||--..... +.+.|.+.|....
T Consensus 1 l~~~rvLiVdD~~~~~~~---l~~~L~~~G~~v~ 31 (127)
T 3i42_A 1 MSLQQALIVEDYQAAAET---FKELLEMLGFQAD 31 (127)
T ss_dssp -CCEEEEEECSCHHHHHH---HHHHHHHTTEEEE
T ss_pred CCCCEEEEEECCHHHHHH---HHHHHHHCCCEEE
T ss_conf 998889999578999999---9999998799999
No 69
>>2pkp_A 3-isopropylmalate dehydratase small subunit 1; beta barrel, amino-acid biosynthesis, leucine biosynthesis; 2.10A {Methanocaldococcus jannaschii DSM2661} (A:)
Probab=32.75 E-value=20 Score=17.93 Aligned_cols=48 Identities=23% Similarity=0.362 Sum_probs=40.7
Q ss_pred CCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf 510210028975999920045738899999999978997899999983
Q gi|254780309|r 8 PQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59)
Q Consensus 8 ~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59)
.++.....++-+|++..+-+=+|++=.+++..++..|.+.|..-.++|
T Consensus 42 ~~~~~~~~~~~~iiVaG~nfG~GSSRE~A~~al~~~Gi~aVIA~sFa~ 89 (170)
T 2pkp_A 42 DENFPKKVKEGDVIVAGENFGCGSSREQAVIAIKYCGIKAVIAKSFAR 89 (170)
T ss_dssp CTTHHHHCCTTCEEEECTTBTBSSCCHHHHHHHHTTTCCEEEESCBCH
T ss_pred CCCCCHHCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEEHHH
T ss_conf 731100023456798413224688764899999961256899833567
No 70
>>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A (A:)
Probab=31.95 E-value=44 Score=16.11 Aligned_cols=44 Identities=16% Similarity=0.180 Sum_probs=36.4
Q ss_pred C-CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECC
Q ss_conf 2-8975999920045738899999999978997899999983068
Q gi|254780309|r 15 V-AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLK 58 (59)
Q Consensus 15 i-~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~~ 58 (59)
| .|-.|+=|++.-..|.|..++.+.|++........+.+.|..+
T Consensus 58 l~~GD~Il~INg~~~~~~~~~~~~~~l~~~~~~~~v~l~v~r~~~ 102 (111)
T 2koj_A 58 LKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKMEGTVSLLVFRQEE 102 (111)
T ss_dssp SCTTCEEEEETTEECTTSCHHHHHHHHHHCCCSSEEEEEEEECCC
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHCCCCCCEEEEEEEECCC
T ss_conf 877889999999995699899999999729999989999983898
No 71
>>3ca8_A Protein YDCF; two domains, alpha/beta fold, helix bundle, structural genomics, structure 2 function project, S2F, unknown function; 1.80A {Escherichia coli K12} (A:32-182)
Probab=30.14 E-value=48 Score=15.93 Aligned_cols=39 Identities=23% Similarity=0.313 Sum_probs=33.6
Q ss_pred CCCCCEEEEEEECCCCCHHHHHHHHHHHHC--CCCEEEEEE
Q ss_conf 028975999920045738899999999978--997899999
Q gi|254780309|r 14 HVAGLKILLIDDVYTTGATAKCAAIALKKA--GAMTVSILT 52 (59)
Q Consensus 14 ~i~gk~vliVDDiitTG~T~~~~~~~L~~~--ga~~V~~~~ 52 (59)
.+....|++-+...+|...+..+.+.|++. +.+++.+++
T Consensus 80 Gvp~~~I~~e~~s~~T~eNa~~~~~~l~~~~~~~~~iilVT 120 (151)
T 3ca8_A 80 HIPHEKIWIEDQSTNCGENARFSIALLNQAVERVHTAIVVQ 120 (151)
T ss_dssp CCCGGGEEEECCCCSHHHHHHHHHHHHHTCSSCCSCEEEEC
T ss_pred CCCHHHEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEC
T ss_conf 99899955278877889999999999996399988799989
No 72
>>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} (A:)
Probab=28.41 E-value=51 Score=15.76 Aligned_cols=31 Identities=23% Similarity=0.263 Sum_probs=19.7
Q ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEE
Q ss_conf 9759999200457388999999999789978999
Q gi|254780309|r 17 GLKILLIDDVYTTGATAKCAAIALKKAGAMTVSI 50 (59)
Q Consensus 17 gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~ 50 (59)
|++||+|||--. ....+...|.+.|...+..
T Consensus 2 ~~riLiVDD~~~---~~~~l~~~L~~~g~~v~~~ 32 (120)
T 1tmy_A 2 GKRVLIVDDAAF---MRMMLKDIITKAGYEVAGE 32 (120)
T ss_dssp CCEEEEECSCHH---HHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEECCHH---HHHHHHHHHHHCCCEEEEE
T ss_conf 986999939999---9999999999879989999
No 73
>>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} (A:1-142,A:271-284)
Probab=28.32 E-value=52 Score=15.75 Aligned_cols=42 Identities=10% Similarity=0.204 Sum_probs=32.1
Q ss_pred HHHCCCCCEEEEEEECCCCCHHHHH---HHHHHHHCCCCEEEEEE
Q ss_conf 2100289759999200457388999---99999978997899999
Q gi|254780309|r 11 VSKHVAGLKILLIDDVYTTGATAKC---AAIALKKAGAMTVSILT 52 (59)
Q Consensus 11 ~~~~i~gk~vliVDDiitTG~T~~~---~~~~L~~~ga~~V~~~~ 52 (59)
....+.|++++++--....--++.+ .+..++++||+++....
T Consensus 41 i~~~v~g~~V~ii~s~~~~~d~l~eLlll~~alr~~ga~~i~lVi 85 (156)
T 1u9y_A 41 IVDEINDDEAVIINTQKNQNDAIVETILLCDALRDEGVKKITLVA 85 (156)
T ss_dssp ECSCCCSSEEEEECCCSSHHHHHHHHHHHHHHHHTTTCCEEEEEC
T ss_pred ECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEE
T ss_conf 577778997999907887542378899999999985646632112
No 74
>>1s8n_A Putative antiterminator; structural genomics, transcriptional antiterminator, two component system, PSI; 1.48A {Mycobacterium tuberculosis H37RV} (A:1-143)
Probab=28.29 E-value=52 Score=15.75 Aligned_cols=36 Identities=17% Similarity=0.109 Sum_probs=25.0
Q ss_pred HCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 002897599992004573889999999997899789999
Q gi|254780309|r 13 KHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSIL 51 (59)
Q Consensus 13 ~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~ 51 (59)
....+++||||||--. ......+.|.+.|...+..+
T Consensus 9 ~~~~~~~VLIVDD~~~---~r~~l~~~L~~~g~~vv~~a 44 (143)
T 1s8n_A 9 DAAVPRRVLIAEDEAL---IRMDLAEMLREEGYEIVGEA 44 (143)
T ss_dssp --CCCCEEEEECSSHH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCEEEEECCCHH---HHHHHHHHHHHCCCEEEEEE
T ss_conf 8887888999829899---99999999998699799998
No 75
>>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12} (A:)
Probab=27.81 E-value=38 Score=16.46 Aligned_cols=34 Identities=24% Similarity=0.283 Sum_probs=23.1
Q ss_pred HCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEE
Q ss_conf 0028975999920045738899999999978997899
Q gi|254780309|r 13 KHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVS 49 (59)
Q Consensus 13 ~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~ 49 (59)
..++|++||+|||--..-. ...+.|.+.|.....
T Consensus 3 ~~l~~~~vLiVdd~~~~~~---~~~~~L~~~g~~v~~ 36 (130)
T 3eod_A 3 QPLVGKQILIVEDEQVFRS---LLDSWFSSLGATTVL 36 (130)
T ss_dssp CTTTTCEEEEECSCHHHHH---HHHHHHHHTTCEEEE
T ss_pred CCCCCCEEEEEECCHHHHH---HHHHHHHHCCCEEEE
T ss_conf 9888998999949899999---999999987999999
No 76
>>1nh8_A ATP phosphoribosyltransferase; prtase, de novo His biosynthesis, PRPP, structural genomics, PSI, protein structure initiative; HET: AMP HIS; 1.80A {Mycobacterium tuberculosis H37RV} (A:107-199)
Probab=27.47 E-value=26 Score=17.39 Aligned_cols=20 Identities=25% Similarity=0.348 Sum_probs=13.8
Q ss_pred EEECCCCCHHHHHHHHHHHHCCCCEEE
Q ss_conf 920045738899999999978997899
Q gi|254780309|r 23 IDDVYTTGATAKCAAIALKKAGAMTVS 49 (59)
Q Consensus 23 VDDiitTG~T~~~~~~~L~~~ga~~V~ 49 (59)
|=|++.||+||. ++|-+.+.
T Consensus 66 IvDiv~TG~TLr-------~NgL~~i~ 85 (93)
T 1nh8_A 66 IADVVGSGRTLS-------QHDLVAFG 85 (93)
T ss_dssp EEEEESSSHHHH-------HTTEEEEE
T ss_pred EEEEECCHHHHH-------HCCCEECC
T ss_conf 888737778999-------87998875
No 77
>>2h06_A Ribose-phosphate pyrophosphokinase I; PRS1, PRPP synthetase 1, phosphoribosyl pyrophosphate synthetase 1, transferase; 2.20A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h07_A 2h08_A (A:1-147,A:293-326)
Probab=26.50 E-value=56 Score=15.57 Aligned_cols=42 Identities=17% Similarity=0.116 Sum_probs=32.4
Q ss_pred HHHCCCCCEEEEEEECCCCCH----HHHHHHHHHHHCCCCEEEEEE
Q ss_conf 210028975999920045738----899999999978997899999
Q gi|254780309|r 11 VSKHVAGLKILLIDDVYTTGA----TAKCAAIALKKAGAMTVSILT 52 (59)
Q Consensus 11 ~~~~i~gk~vliVDDiitTG~----T~~~~~~~L~~~ga~~V~~~~ 52 (59)
....+.|++|++|-+....=. -+--.+..+++.|+++|.++.
T Consensus 44 i~~~vrg~dV~iiqs~~~~~nd~lmELlllidAlr~~gA~~ItlVi 89 (181)
T 2h06_A 44 IGESVRGEDVYIVQSGCGEINDNLMELLIMINACKIASASRVTAVI 89 (181)
T ss_dssp ECSCCBTCEEEEECCCCSCHHHHHHHHHHHHHHHHTTTBSEEEEEE
T ss_pred ECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEC
T ss_conf 7887789958999589998306799999999998760665404741
No 78
>>1h3d_A ATP-phosphoribosyltransferase; hisitidine biosynthesis, glycosyltransferase; HET: AMP TLA; 2.7A {Escherichia coli} (A:101-193)
Probab=26.14 E-value=28 Score=17.18 Aligned_cols=13 Identities=46% Similarity=0.570 Sum_probs=10.1
Q ss_pred EEECCCCCHHHHH
Q ss_conf 9200457388999
Q gi|254780309|r 23 IDDVYTTGATAKC 35 (59)
Q Consensus 23 VDDiitTG~T~~~ 35 (59)
|=|+..||+||.+
T Consensus 67 IvDiv~TGtTLr~ 79 (93)
T 1h3d_A 67 ICDLVSTGATLEA 79 (93)
T ss_dssp EEEEESSCHHHHH
T ss_pred EEEECCCHHHHHH
T ss_conf 2631356789998
No 79
>>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} (A:1-131)
Probab=26.12 E-value=57 Score=15.53 Aligned_cols=33 Identities=18% Similarity=0.237 Sum_probs=22.6
Q ss_pred HCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEE
Q ss_conf 002897599992004573889999999997899789
Q gi|254780309|r 13 KHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTV 48 (59)
Q Consensus 13 ~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V 48 (59)
..+.+++||||||-- .......+.|.+.|....
T Consensus 3 ~~~~~~~ILiVdDd~---~~~~~l~~~L~~~g~~v~ 35 (131)
T 1ys7_A 3 TGVTSPRVLVVDDDS---DVLASLERGLRLSGFEVA 35 (131)
T ss_dssp ----CCEEEEECSCH---HHHHHHHHHHHHTTCEEE
T ss_pred CCCCCCEEEEEECCH---HHHHHHHHHHHHCCCEEE
T ss_conf 899998799997999---999999999997899999
No 80
>>3kht_A Response regulator; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.10A {Hahella chejuensis kctc 2396} (A:)
Probab=24.94 E-value=39 Score=16.42 Aligned_cols=30 Identities=10% Similarity=0.122 Sum_probs=20.6
Q ss_pred CCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCC
Q ss_conf 028975999920045738899999999978997
Q gi|254780309|r 14 HVAGLKILLIDDVYTTGATAKCAAIALKKAGAM 46 (59)
Q Consensus 14 ~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~ 46 (59)
.+++++||||||--+.. ....+.|++.|..
T Consensus 2 sl~~~~iLiVdD~~~~~---~~l~~~L~~~g~~ 31 (144)
T 3kht_A 2 SLRSKRVLVVEDNPDDI---ALIRRVLDRKDIH 31 (144)
T ss_dssp ---CEEEEEECCCHHHH---HHHHHHHHHTTCC
T ss_pred CCCCCEEEEEECCHHHH---HHHHHHHHHCCCC
T ss_conf 98898999995899999---9999999968998
No 81
>>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} (A:)
Probab=24.84 E-value=36 Score=16.59 Aligned_cols=32 Identities=25% Similarity=0.229 Sum_probs=19.2
Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHCCCC-EEEE
Q ss_conf 8975999920045738899999999978997-8999
Q gi|254780309|r 16 AGLKILLIDDVYTTGATAKCAAIALKKAGAM-TVSI 50 (59)
Q Consensus 16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~-~V~~ 50 (59)
.||.||||||--. ......+.|.+.|.. .|..
T Consensus 1 a~~~ILiVddd~~---~~~~l~~~L~~~g~~~~v~~ 33 (140)
T 1k68_A 1 AHKKIFLVEDNKA---DIRLIQEALANSTVPHEVVT 33 (140)
T ss_dssp CCCEEEEECCCHH---HHHHHHHHHHTCSSCCEEEE
T ss_pred CCCCEEEEECCHH---HHHHHHHHHHHCCCCCEEEE
T ss_conf 9982999979999---99999999996799818999
No 82
>>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens} (A:)
Probab=24.77 E-value=60 Score=15.39 Aligned_cols=43 Identities=14% Similarity=0.208 Sum_probs=34.2
Q ss_pred CC-CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf 02-89759999200457388999999999789978999999830
Q gi|254780309|r 14 HV-AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59)
Q Consensus 14 ~i-~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59)
.+ .|-.|+=|++.-.+|.++.++.+.|++........+.+.|-
T Consensus 55 ~L~~GD~Il~Vng~~v~~~~~~ev~~~l~~~~~~~~i~l~v~r~ 98 (101)
T 2yt7_A 55 ALSIGDRLTAINGTSLVGLPLAACQAAVRETKSQTSVTLSIVHC 98 (101)
T ss_dssp SCCTTCEEEEESSCBCTTSCHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCCCEEEEEEECC
T ss_conf 99644684889999889998999999997699998899999828
No 83
>>1ve4_A ATP phosphoribosyltransferase; riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.20A {Thermus thermophilus} (A:92-177)
Probab=24.41 E-value=42 Score=16.22 Aligned_cols=22 Identities=45% Similarity=0.641 Sum_probs=14.4
Q ss_pred EEECCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 92004573889999999997899789999
Q gi|254780309|r 23 IDDVYTTGATAKCAAIALKKAGAMTVSIL 51 (59)
Q Consensus 23 VDDiitTG~T~~~~~~~L~~~ga~~V~~~ 51 (59)
|=|+..||.||. ++|-+.+..+
T Consensus 60 IvDiv~TG~TLr-------~NgL~~i~~I 81 (86)
T 1ve4_A 60 VVDVVQTGATLR-------AAGLVEVEVL 81 (86)
T ss_dssp EEEEESSSHHHH-------HTTCEEEEEE
T ss_pred EEEEECCHHHHH-------HCCCEEEEEE
T ss_conf 665302688999-------8699643378
No 84
>>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} (A:118-254)
Probab=23.21 E-value=61 Score=15.36 Aligned_cols=35 Identities=20% Similarity=0.172 Sum_probs=23.2
Q ss_pred HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEE
Q ss_conf 10028975999920045738899999999978997899
Q gi|254780309|r 12 SKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVS 49 (59)
Q Consensus 12 ~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~ 49 (59)
.+..+++.||||||--. ......+.|...|.....
T Consensus 7 ~~~~~~~~iLiVdd~~~---~~~~l~~~L~~~g~~v~~ 41 (137)
T 2ayx_A 7 VSDNDDMMILVVDDHPI---NRRLLADQLGSLGYQCKT 41 (137)
T ss_dssp CCCCCCCEEEEEESSHH---HHHHHHHHHHHHTSEEEE
T ss_pred CCCCCCCEEEEECCCHH---HHHHHHHHHHHCCCEEEE
T ss_conf 67899988999919899---999999999987999999
No 85
>>1c96_A Mitochondrial aconitase; lyase, tricarboxylic acid cycle, iron-sulfur, mitochondrion, transit peptide, 4Fe-4S, 3D-structure; HET: FLC; 1.81A {Bos taurus} (A:535-753)
Probab=23.14 E-value=20 Score=18.01 Aligned_cols=42 Identities=19% Similarity=0.313 Sum_probs=36.6
Q ss_pred CCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf 028975999920045738899999999978997899999983
Q gi|254780309|r 14 HVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59)
Q Consensus 14 ~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59)
+.++..||+..+-+=+|++=.+++..++..|.+.|..-.+||
T Consensus 90 ~~~~~~IiVaG~NfG~GSSRE~Aa~al~~~Gi~aVIA~SFar 131 (219)
T 1c96_A 90 QHGIRWVVIGDENYGEGASREHSALEPRHLGGRAIITKSFAR 131 (219)
T ss_dssp HHTCCEEEECCSSBTBSCCCTHHHHHHHHTTEEEEEESCBCH
T ss_pred HCCCCEEEEECCCCCCCCHHHHHHHHHHHHCEEEEEEHHHHH
T ss_conf 759987999378679855599999878873889999846999
No 86
>>1z7m_E ATP phosphoribosyltransferase; ATP-PRT, histidine biosynthesis, hiszg, allosteric, evolution; 2.90A {Lactococcus lactis} (E:91-177)
Probab=23.02 E-value=28 Score=17.21 Aligned_cols=21 Identities=29% Similarity=0.347 Sum_probs=13.3
Q ss_pred EEECCCCCHHHHHHHHHHHHCCCCEEEE
Q ss_conf 9200457388999999999789978999
Q gi|254780309|r 23 IDDVYTTGATAKCAAIALKKAGAMTVSI 50 (59)
Q Consensus 23 VDDiitTG~T~~~~~~~L~~~ga~~V~~ 50 (59)
|=|+..||.||. ++|-+.+..
T Consensus 63 IvDiv~TG~TLk-------~NgL~~i~~ 83 (87)
T 1z7m_E 63 IVDIVETGNTLS-------ANGLEVIEK 83 (87)
T ss_dssp EEEEESSSHHHH-------TTTCEEEEE
T ss_pred EEEECCCHHHHH-------HCCCEECCE
T ss_conf 386504689999-------878998513
No 87
>>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} (A:)
Probab=22.01 E-value=47 Score=15.97 Aligned_cols=40 Identities=25% Similarity=0.143 Sum_probs=28.3
Q ss_pred CCEEEEEEECCCCCHHHH----HHHHHHHHCCCCEEEEEEEEEEC
Q ss_conf 975999920045738899----99999997899789999998306
Q gi|254780309|r 17 GLKILLIDDVYTTGATAK----CAAIALKKAGAMTVSILTFSRSL 57 (59)
Q Consensus 17 gk~vliVDDiitTG~T~~----~~~~~L~~~ga~~V~~~~lar~~ 57 (59)
|+.+ =+|=-++||.-+. +.-++++.+||+.|.+---|++-
T Consensus 14 Gq~~-e~~~~VsT~~ELer~L~ELe~~l~r~GAr~V~ItIsA~~~ 57 (106)
T 1qys_A 14 GKNF-DYTYTVTTESELQKVLNELXDYIKKQGAKRVRISITARTK 57 (106)
T ss_dssp SCEE-EEEEEESSSSHHHHHHHHHHHHHHHHCCSEEEEEEECSSH
T ss_pred CCEE-EEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCH
T ss_conf 8188-8999980548999999999999987176458999996667
No 88
>>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixation regulation; HET: 15P; 1.60A {Rhizobium meliloti} (A:)
Probab=21.95 E-value=69 Score=15.08 Aligned_cols=31 Identities=19% Similarity=0.241 Sum_probs=19.3
Q ss_pred CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEE
Q ss_conf 2897599992004573889999999997899789
Q gi|254780309|r 15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTV 48 (59)
Q Consensus 15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V 48 (59)
+++++||||||-- .........|...|....
T Consensus 1 m~~~~ILiVDD~~---~~~~~l~~~L~~~g~~v~ 31 (126)
T 1dbw_A 1 MQDYTVHIVDDEE---PVRKSLAFMLTMNGFAVK 31 (126)
T ss_dssp CCCCEEEEEESSH---HHHHHHHHHHHHTTCEEE
T ss_pred CCCCEEEEEECCH---HHHHHHHHHHHHCCCEEE
T ss_conf 9989899997999---999999999998799999
No 89
>>2q9v_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; Cys Ser mutant, structural genomics consortium, SGC, transferase; 2.00A {Homo sapiens} (A:)
Probab=21.81 E-value=50 Score=15.80 Aligned_cols=37 Identities=16% Similarity=0.214 Sum_probs=29.5
Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 8975999920045738899999999978997899999
Q gi|254780309|r 16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILT 52 (59)
Q Consensus 16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~ 52 (59)
.|-.++=|+++-..|.|..++.+.|++........+.
T Consensus 48 ~GD~Il~VNg~~v~~~t~~ev~~~l~~~~~~~~~~l~ 84 (90)
T 2q9v_A 48 SGDELISVDGTPVIGKSHQLVVQLMQQAAKQGHVNLT 84 (90)
T ss_dssp TTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEE
T ss_pred CCCEEEEECCEECCCCCHHHHHHHHHHCCCCCEEEEE
T ss_conf 5679999999998899899999999848999889999
No 90
>>2wbn_A G2P, terminase large subunit; large terminase, nuclease, viral protein, DNA packaging; 1.90A {Bacillus phage SPP1} PDB: 2wc9_A (A:)
Probab=21.31 E-value=71 Score=15.00 Aligned_cols=35 Identities=20% Similarity=0.167 Sum_probs=29.1
Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEE
Q ss_conf 89759999200457388999999999789978999
Q gi|254780309|r 16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSI 50 (59)
Q Consensus 16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~ 50 (59)
.++.+.++|.++.+|.|..+.++.|++.+.....+
T Consensus 74 ~~~~~~i~~e~~~~~~~~~~~a~~l~~~~~~~~~~ 108 (212)
T 2wbn_A 74 RKNRIYAIDELVDHKVSLKRTADFVRKNKYESARI 108 (212)
T ss_dssp TTTEEEEEEEEEESSCCHHHHHHHHHHTTCTTSCE
T ss_pred CCCEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCC
T ss_conf 89989999860215889999999999745687753
No 91
>>2vd3_A ATP phosphoribosyltransferase; metal-binding, glycosyltransferase, HISG, cytoplasm, histidine, magnesium; HET: HIS; 2.45A {Methanobacterium thermoautotrophicum} (A:214-290)
Probab=21.02 E-value=72 Score=14.97 Aligned_cols=32 Identities=16% Similarity=0.145 Sum_probs=25.9
Q ss_pred CCCCHHHHHHHHHHHHCCCCEEEEEEEEEECC
Q ss_conf 45738899999999978997899999983068
Q gi|254780309|r 27 YTTGATAKCAAIALKKAGAMTVSILTFSRSLK 58 (59)
Q Consensus 27 itTG~T~~~~~~~L~~~ga~~V~~~~lar~~~ 58 (59)
+-....+......|++.||+.|.+.-+-|.+|
T Consensus 45 vV~~~~v~~~i~~Lk~~GA~~Ilv~~Iek~ip 76 (77)
T 2vd3_A 45 VVDEKEVFNLINRLKAVGARDILVVPIERIIP 76 (77)
T ss_dssp EEETTTHHHHHHHHHTTTCEEEEEEECSCCCC
T ss_pred EECHHHHHHHHHHHHHCCCCEEEEECCEECCC
T ss_conf 97599999999999984998589964500279
No 92
>>3g4d_A (+)-delta-cadinene synthase isozyme XC1; cyclase, lyase, magnesium, metal-binding; 2.40A {Gossypium arboreum} PDB: 3g4f_A* (A:287-436)
Probab=20.91 E-value=12 Score=19.11 Aligned_cols=19 Identities=26% Similarity=0.223 Sum_probs=15.8
Q ss_pred EEEEECCCCCHHHHHHHHH
Q ss_conf 9992004573889999999
Q gi|254780309|r 21 LLIDDVYTTGATAKCAAIA 39 (59)
Q Consensus 21 liVDDiitTG~T~~~~~~~ 39 (59)
-++||++|+.+|+.++...
T Consensus 18 t~lDD~yD~ygT~eEl~~f 36 (150)
T 3g4d_A 18 SIVDDTYDSYATYEELIPY 36 (150)
T ss_dssp HHHHHHHTSSCCHHHHHHH
T ss_pred HHHHHHHCCCCCHHHHHHH
T ss_conf 9998874255779999999
No 93
>>2jba_A Phosphate regulon transcriptional regulatory protein PHOB; transcription factor, sensory transduction, phosphate regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A (A:)
Probab=20.70 E-value=59 Score=15.43 Aligned_cols=30 Identities=20% Similarity=0.334 Sum_probs=18.5
Q ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEE
Q ss_conf 975999920045738899999999978997899
Q gi|254780309|r 17 GLKILLIDDVYTTGATAKCAAIALKKAGAMTVS 49 (59)
Q Consensus 17 gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~ 49 (59)
+|+||||||--.... ...+.|.+.|.....
T Consensus 2 ~~rILiVdD~~~~~~---~l~~~L~~~g~~v~~ 31 (127)
T 2jba_A 2 ARRILVVEDEAPIRE---MVCFVLEQNGFQPVE 31 (127)
T ss_dssp CCEEEEECSCHHHHH---HHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCHHHHH---HHHHHHHHCCCEEEE
T ss_conf 998999979999999---999999987999999
No 94
>>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} (A:)
Probab=20.53 E-value=52 Score=15.73 Aligned_cols=37 Identities=30% Similarity=0.234 Sum_probs=27.0
Q ss_pred EEEEECCCCCHHHH----HHHHHHHHCCCCEEEEEEEEEEC
Q ss_conf 99920045738899----99999997899789999998306
Q gi|254780309|r 21 LLIDDVYTTGATAK----CAAIALKKAGAMTVSILTFSRSL 57 (59)
Q Consensus 21 liVDDiitTG~T~~----~~~~~L~~~ga~~V~~~~lar~~ 57 (59)
+=+|=-++||.-+. +.-++++.+||+.|.+---|++-
T Consensus 19 ~e~~~~VsT~~ELer~L~EL~~~l~r~GAr~V~ItIsA~~~ 59 (96)
T 2jvf_A 19 IEIDIRVSTGKELERALQELEKALARAGARNVQITISAEND 59 (96)
T ss_dssp EEEEEECCSSSHHHHHHHHHHHHHHHHTCSEEEEEEECSSH
T ss_pred EEEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCH
T ss_conf 88999981438999999999999986176448999996566
No 95
>>2vd3_A ATP phosphoribosyltransferase; metal-binding, glycosyltransferase, HISG, cytoplasm, histidine, magnesium; HET: HIS; 2.45A {Methanobacterium thermoautotrophicum} (A:91-184)
Probab=20.24 E-value=57 Score=15.50 Aligned_cols=13 Identities=38% Similarity=0.588 Sum_probs=10.1
Q ss_pred EEECCCCCHHHHH
Q ss_conf 9200457388999
Q gi|254780309|r 23 IDDVYTTGATAKC 35 (59)
Q Consensus 23 VDDiitTG~T~~~ 35 (59)
|=|+..||+|+.+
T Consensus 68 IvDiv~TG~TLr~ 80 (94)
T 2vd3_A 68 ITDLSSTGTTLRM 80 (94)
T ss_dssp EEEEESSTHHHHH
T ss_pred EEEEECCHHHHHH
T ss_conf 8988457088997
Done!